Assays

What is an Assay?

157 Assays visible to you, out of a total of 179

Tissue Collection - Metadata

Endometriosis

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Endometriosis

Study: Organoid co-culture model of the cycling human ...

Organisms: No organisms

SOPs: P.GRI-230228-V1_2.1-Study-Approval.docx, P.GRI-231030-V1_Tissue_Protocol

Data files: samples-publish2023-11-03_PAV.xlsx, samples-publish2023-11-03_TIS.xlsx

Snapshots: No snapshots

Created: 3rd Nov 2023 at 14:26, Last updated: 17th Nov 2023 at 21:20

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: No SOPs

Data files: All Metadata - CD8 Depletion.xlsx

Snapshots: No snapshots

Created: 13th Oct 2023 at 20:11, Last updated: 24th Oct 2023 at 16:40

Immunohistochemistry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FLY-230911-V1_IHC-CD8 Depletion

Data files: AB-IHC-samples-publish2023-10-11_17-10.xlsx, D.IMG-IHC-samples-publish2023-10-11_17-30.xlsx, TIS-samples-publish2023-10-11_14-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:48, Last updated: 23rd Oct 2023 at 20:08

PET/CT Scan - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FLY-230523-V1_PET_CT_Imaging

Data files: D.IMG-PET-samples-publish2023-10-11_17-42.xlsx, PAV-2-samples-publish2023-10-11_13-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:46, Last updated: 23rd Oct 2023 at 19:33

Single Cell Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.SHA-220912-V1_Drop-seq_Alignment_Cookbook.pdf

Data files: A.SCXP-samples-publish2023-10-11_18-00.xlsx, DSEQ-TIS-samples-publish2023-10-11_15-50.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 17:49, Last updated: 20th Oct 2023 at 19:30

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FOR-230503-V1_Barcoding-Whole-Genome-Sequenci..., P.FOR-230503-V1_Barcoding_Amplicon_Feb2023, P.SHA-220819-V1_SeqWellHughes.et.al.Master.Prot...

Data files: DNA-BAC-samples-publish2023-10-11_14-51.xlsx, DNA-TIS-samples-publish2023-10-11_14-50.xlsx, DSEQ-BAC-samples-publish2023-10-11_15-51.xlsx, DSEQ-TIS-samples-publish2023-10-11_15-50.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 17:45, Last updated: 20th Oct 2023 at 19:27

Digitally Barcoded Mtb Matrix Analysis - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FOR-231020-V1_DBMM-Analysis-CD8.docx

Data files: A.DBMM-samples-publish2023-10-11_16-10.xlsx, CD8 Depletion Digitally Barcoded MTB Matrix.xlsx, DSEQ-BAC-samples-publish2023-10-11_15-51.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 17:48, Last updated: 20th Oct 2023 at 19:27

DNA Extraction - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FOR-230503-V1_Barcoding_Amplicon_Feb2023, P.SHA-220819-V1_SeqWellHughes.et.al.Master.Prot...

Data files: BAC-samples-publish2023-10-11_14-35.xlsx, DNA-BAC-samples-publish2023-10-11_14-51.xlsx, DNA-TIS-samples-publish2023-10-11_14-50.xlsx, TIS-samples-publish2023-10-11_14-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:52, Last updated: 20th Oct 2023 at 16:00

Flow Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FLY-230509-V1_CD8-NX-Protocol

Data files: AB-FCS-samples-publish2023-10-11_15-07.xlsx, ABP-samples-publish2023-10-11_16-15.xlsx, D.FLOW-samples-publish2023-10-11_16-20.xlsx, TIS-samples-publish2023-10-11_14-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:49, Last updated: 20th Oct 2023 at 14:51

Flow Cytometry Analysis - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: No SOPs

Data files: A.FLOW-samples-publish2023-10-11_16-45.xlsx, CD8 counts AFLOW, CD8 cytokine AFLOW, D.FLOW-samples-publish2023-10-11_16-20.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:51, Last updated: 20th Oct 2023 at 14:51

Bacterial Extraction - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FOR-231011_Bacterial Extraction

Data files: BAC-samples-publish2023-10-11_14-35.xlsx, TIS-samples-publish2023-10-11_14-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 17:46, Last updated: 19th Oct 2023 at 18:25

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FLY-210708-V1_Hannah's-GentleMacs-Protocol-as..., P.FLY-231011_Patient Visit CD8

Data files: PAV-2-samples-publish2023-10-11_13-11.xlsx, TIS-samples-publish2023-10-11_14-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:45, Last updated: 19th Oct 2023 at 17:08

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FLY-220823-V1_P---NHP_housing.docx, P.FLY-231011_Patient Visit CD8

Data files: AB-samples-publish2023-10-11_13-30.xlsx, BAC-samples-publish2023-10-11_13-48.xlsx, NHP-samples-publish2023-10-11_12-59.xlsx, PAV-2-samples-publish2023-10-11_13-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:43, Last updated: 13th Oct 2023 at 20:12

Clot Modeling Analysis - Data Linked

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Impact of fibrinogen, fibrin thrombi and thromb...

Organisms: No organisms

SOPs: P.KAM-230131-V1_clot-generate-and-image-analysi...

Data files: A.CLOT-samples-publish2023-05-16_12-55.xlsx

Snapshots: No snapshots

Created: 15th May 2023 at 20:59, Last updated: 16th May 2023 at 18:27

Cancer Cell Extravasation Analysis - Data Linked

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Impact of fibrinogen, fibrin thrombi and thromb...

Organisms: No organisms

SOPs: P.KAM-230131-V1_cancer-cell-perfusion-and-extra...

Data files: A.CCE-samples-publish2023-05-16_12-51.xlsx

Snapshots: No snapshots

Created: 15th May 2023 at 21:00, Last updated: 16th May 2023 at 18:27

Microfluidic Device Creation - Metadata

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Impact of fibrinogen, fibrin thrombi and thromb...

Organisms: No organisms

SOPs: P.KAM-230131-V1_Cell-culture.docx, P.KAM-230131-V1_OOC-protocol-device-and-network...

Data files: CEL-samples-publish2023-05-16_11-33.xlsx, OOC-samples-publish2023-05-16_11-38.xlsx

Snapshots: No snapshots

Created: 15th May 2023 at 20:57, Last updated: 16th May 2023 at 18:25

Device Imaging - Data Linked

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Impact of fibrinogen, fibrin thrombi and thromb...

Organisms: No organisms

SOPs: P.KAM-230131-V1_Confocal-imaging.docx

Data files: D.IMG-samples-publish2023-05-16_11-46.xlsx, OOC-samples-publish2023-05-16_11-38.xlsx

Snapshots: No snapshots

Created: 15th May 2023 at 20:58, Last updated: 16th May 2023 at 18:25

Permeability Analysis - Data Linked

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Impact of fibrinogen, fibrin thrombi and thromb...

Organisms: No organisms

SOPs: P.KAM-230131-V1_Confocal-imaging.docx

Data files: A.PERM-samples-publish2023-05-16_12-59.xlsx

Snapshots: No snapshots

Created: 15th May 2023 at 20:58, Last updated: 16th May 2023 at 18:25

Flow Cytometry - Data Linked

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Impact of fibrinogen, fibrin thrombi and thromb...

Organisms: No organisms

SOPs: P.KAM-230131-V1_Flow.docx

Data files: AB-samples-publish2023-05-16_12-07.xlsx, ABP-samples-publish2023-05-16_12-11.xlsx, CEL-samples-publish2023-05-16_11-33.xlsx, D.FLOW-samples-publish2023-05-16_11-54.xlsx

Snapshots: No snapshots

Created: 15th May 2023 at 21:00, Last updated: 16th May 2023 at 18:25

Flow Cytometry Analysis - Data Linked

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Impact of fibrinogen, fibrin thrombi and thromb...

Organisms: No organisms

SOPs: P.KAM-230131-V1_Flow.docx

Data files: A.FLOW-samples-publish2023-05-16_12-02.xlsx, D.FLOW-samples-publish2023-05-16_11-54.xlsx

Snapshots: No snapshots

Created: 15th May 2023 at 21:01, Last updated: 16th May 2023 at 18:25

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Immune cells in bronchoalveolar lavage fluid of...

Organisms: No organisms

SOPs: P.BOO-230324-V1_2016_Nov_04_Bronchoscopy_Protoc..., P.BOO-230324-V1_2018_June_Bronchoscopy_Protocol..., P.BOO-230324-V1_2019_April_Bronchoscopy_Protoco..., P.BOO-230324-V1_2020_Jan_Bronchoscopy_Protocol_..., P.BOO-230324-V1_KC_Protocol

Data files: PAV-samples-publish2023-03-27_16-19.xlsx, TIS-samples-publish2023-03-27_16-27.xlsx

Snapshots: No snapshots

Created: 27th Mar 2023 at 21:03, Last updated: 15th May 2023 at 20:36

Genome Alignment - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Molecular origins of mutational spectra produce...

Organisms: No organisms

SOPs: P.ESS-230303-V1_Data-processing-(alignment).docx

Data files: A.ALN-samples-publish2023-03-24_14-05.xlsx, D.SEQ-samples-publish2023-03-24_13-17.xlsx

Snapshots: No snapshots

Created: 7th Mar 2023 at 20:25, Last updated: 24th Mar 2023 at 19:07

Illumina Sequencing - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Molecular origins of mutational spectra produce...

Organisms: No organisms

SOPs: P.ESS-230308-V2_Duplex-sequencing.docx

Data files: D.SEQ-samples-publish2023-03-24_13-17.xlsx, DNA-samples-publish2023-03-08_13-15.xlsx

Snapshots: No snapshots

Created: 7th Mar 2023 at 20:15, Last updated: 24th Mar 2023 at 18:30

Crystallography - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Interaction of N-Nitroamines with Bincuelar Cop...

Organisms: No organisms

SOPs: No SOPs

Data files: CHM-samples-publish2023-03-16_10-12.xlsx, D.CRY-samples-publish2023-03-16_11-47.xlsx

Snapshots: No snapshots

Created: 16th Mar 2023 at 14:53, Last updated: 16th Mar 2023 at 17:22

X-ray Photoelectron Spectroscopy - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Interaction of N-Nitroamines with Bincuelar Cop...

Organisms: No organisms

SOPs: P.SWA-230302-V1_Fluorescence-and-XPS

Data files: CHM-samples-publish2023-03-16_10-12.xlsx, D.XRS-samples-publish2023-03-16_11-57.xlsx

Snapshots: No snapshots

Created: 16th Mar 2023 at 14:54, Last updated: 16th Mar 2023 at 17:22

Electron Paramagnetic Resonance - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Interaction of N-Nitroamines with Bincuelar Cop...

Organisms: No organisms

SOPs: No SOPs

Data files: CHM-samples-publish2023-03-16_10-12.xlsx, D.PRM-samples-publish2023-03-16_11-48.xlsx

Snapshots: No snapshots

Created: 16th Mar 2023 at 14:54, Last updated: 16th Mar 2023 at 17:22

Absorption and Emission Spectroscopy Analysis - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Interaction of N-Nitroamines with Bincuelar Cop...

Organisms: No organisms

SOPs: No SOPs

Data files: A.SPC-samples-publish2023-03-16_10-25.xlsx, D.SPC-samples-publish2023-03-16_10-23.xlsx

Snapshots: No snapshots

Created: 16th Mar 2023 at 14:56, Last updated: 16th Mar 2023 at 17:22

Nuclear Magnetic Resonance Spectroscopy Analysis - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Interaction of N-Nitroamines with Bincuelar Cop...

Organisms: No organisms

SOPs: No SOPs

Data files: A.NMR-samples-publish2023-03-16_11-39.xlsx, D.NMR-samples-publish2023-03-16_11-23.xlsx

Snapshots: No snapshots

Created: 16th Mar 2023 at 14:56, Last updated: 16th Mar 2023 at 17:22

High Resolution Mass Spectra Analysis - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Interaction of N-Nitroamines with Bincuelar Cop...

Organisms: No organisms

SOPs: No SOPs

Data files: A.MSP-samples-publish2023-03-16_11-37.xlsx, D.MSP-samples-publish2023-03-16_11-35.xlsx

Snapshots: No snapshots

Created: 16th Mar 2023 at 14:57, Last updated: 16th Mar 2023 at 17:22

Chemical Synthesis - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Interaction of N-Nitroamines with Bincuelar Cop...

Organisms: No organisms

SOPs: P.SWA-230223-V1_synthesis-protocol

Data files: CHM-samples-publish2023-03-16_10-12.xlsx

Snapshots: No snapshots

Created: 16th Mar 2023 at 14:49, Last updated: 16th Mar 2023 at 17:22

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