D.SEQ-231115ENG-265
D22-4446 : Saline #1_DNA_220324Eng (CCCAGCTTCT-GTTTGGTGTC)
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM9751332
Lee Pribyl
D22-4446 Saline Male 10 Week Mgmt-/- Liver Visium; Folder: 220324Eng
https://fairdomhub.org/sops/911
Not specified
DNA-231115ENG-265
fastq.gz
Spatial Transcriptomics
Illumina NextSeq 500
20.0
50.0
210,663,721 (34.16)
198465191.0
RNA-Seq
TRANSCRIPTOMIC
cDNA
polyA RNA
mm10
0.0061
0.0207
16537.0
Paired-end
GSM9751332
BMC
MIT
Creators and Submitter
Views: 7
Created: 21st May 2026 at 16:41
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Projects: MIT SRP, Hi-IMPAcTB, MetNet, Endometriosis, Cancer Systems Biology Consortium (CSBC), Shoulders Lab, NExtSEEK Independent Projects
Web page: https://nextseek.mit.edu/
The MIT Superfund Research Program was created in 2017 to be responsive to communities who live near Superfund Sites. In particular, the MIT team leverages scientific research, community engagement, and educational experiences to support people who are concerned about hazardous chemicals in their environment.
Carcinogenic contaminants threaten the health of people living in the Mystic River Watershed (near the Olin, Industriplex, and Wells G&H Superfund sites) and members of Native American ...
Programme: NExtSEEK
Public web page: Not specified
Submitter: Dikshant Pradhan
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Assays: Absorption and Emission Spectroscopy - Data Linked, Absorption and Emission Spectroscopy Analysis - Data Linked, Agglutination Assay - Data Linked, All Metadata, All Metadata, All Metadata, All Metadata, All Metadata, All Metadata, All Metadata, Atomic Force Microscopy - Data Linked, Chemical Challenge - Metadata, Chemical Challenge - Metadata, Chemical Simulations - Data Linked, Chemical Simulations - Data Linked, Chemical Synthesis - Metadata, Chemical Synthesis - Metadata, Chemical Synthesis - Metadata, Chemical Synthesis - Metadata, Comet Chip - Data Linked, Comet Chip Analysis - Data Attached, Comet Chip Analysis - Data Attached, Crystallography - Data Linked, DNA Adduct Analysis - Data Linked, DNA Extraction - Metadata, DNA Extraction - Metadata, ELISA - Data Linked, Electrochemical Sensor Testing - Data Linked, Electron Paramagnetic Resonance - Data Linked, Experimental Physiochemical Measurement - Data Linked, Experimental Physiochemical Measurement Analysis - Data Linked, Extraction and Library Creation - Metadata, Field Water Sensor Run, Flow Cytometry - Data Linked, Flow Cytometry Analysis - Data Linked, Fourier Transform Infrared Spectroscopy - Data Linked, GPT Assay - Data Attached, GPT Assay - Data Linked, GPT Assay - Data Linked, GPT Assay – Data Attached, Gel Permeation Chromatography - Data Linked, Gene Expression Analysis - Data Linked, Genome Alignment - Data Linked, Genome Alignment - Data Linked, High Resolution Mass Spectra - Data Linked, High Resolution Mass Spectra Analysis - Data Linked, Illumina Sequencing - Data Linked, Imaging - Data Linked, Imaging - Data Linked, Imaging Analysis - Data Linked, Imaging Analysis - Data Linked, Library Creation - Metadata, Library Prep - Metadata, Library Prep - Metadata, Mass Spectrometry - Data Linked, Mass Spectrometry - Data Linked, Mass Spectrometry - Data Linked, Mass Spectrometry Analysis - Data Linked, Mass Spectrometry Processing – Data Linked, Mass Spectrometry – Data Linked, Mouse Challenge - Metadata, Mouse Necropsy – Metadata, Mutational Spectra Analysis - Data Linked, Mutational Spectra Analysis - Data Linked, Mutational Spectral Analysis - Data Attached, Necropsy - Metadata, Nuclear Magnetic Resonance - Data Linked, Nuclear Magnetic Resonance Analysis - Data Linked, Nuclear Magnetic Resonance Spectroscopy - Data Linked, Nuclear Magnetic Resonance Spectroscopy - Data Linked, Nuclear Magnetic Resonance Spectroscopy Analysis - Data Linked, Nuclear Magnetic Resonance Spectroscopy Analysis - Data Linked, PCR - Data Linked, Pendant Drop Tensiometry - Data Linked, Phosphoproteomics Analysis - Data Linked, Predictive Modeling - Data Linked, Protein Extraction - Metadata, RNA Extraction - Metadata, RNA Isolation - Metadata, RaDR - Data Linked, RaDR Image Machine Learning Analysis – Data Attached, Sample Collection - Metadata, Sensor Creation - Metadata, Short Read Sequencing - Data Linked, Short Read Sequencing - Data Linked, Short Read Sequencing - Data Linked, Single-crystal X-ray Crystallography - Data Linked, Solid Phase Extraction - Metadata, Spatial Transcriptomics - Data Linked, Spatial Transcriptomics Analysis - Data Linked, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Imaging - Data Linked, Tissue Imaging – Metadata, Tissue Lysis – Metadata, Tissue Sectioning - Metadata, UV-Vis Spectroscopy - Data Linked, UV-Vis Spectroscopy Analysis - Data Linked, Water Quality Detection - Data Linked, Western Blot - Data Linked, Western Blot - Data Linked, Western Blot Analysis - Data Linked, Western Blot Analysis - Data Linked, X-ray Photoelectron Spectroscopy - Data Linked
Lee J. Pribyl, Jennifer E. Kay, Joshua J. Corrigan, Lindsay B. Volk, Monét Norales, Norah A. Owiti, Evan A. Kowal, Ishwar N. Kohale, Ilana S. Nazari, Matilda R. Swanson, Aimee C. Moise, Duanduan Ma, Stuart S. Levine, Emily Michelsen, Robert G. Croy, Timothy Ragan, Dorothea K. Torous, Svetlana L. Avlasevich, Stephen D. Dertinger, Sebastian E. Carrasco, Leona D. Samson, John M. Essigmann, Forest M. White, Bevin P. Engelward
DOI: https://www.biorxiv.org/content/10.1101/2025.10.01.679856v1 ...
Submitter: Charles Demurjian
Investigation: MIT SRP
Assays: All Metadata, DNA Adduct Analysis - Data Linked, Flow Cytometry - Data Linked, Flow Cytometry Analysis - Data Linked, Gene Expression Analysis - Data Linked, Imaging - Data Linked, Imaging Analysis - Data Linked, Library Creation - Metadata, Mouse Challenge - Metadata, Phosphoproteomics Analysis - Data Linked, Short Read Sequencing - Data Linked, Spatial Transcriptomics - Data Linked, Spatial Transcriptomics Analysis - Data Linked, Tissue Collection - Metadata, Western Blot - Data Linked, Western Blot Analysis - Data Linked
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: MIT SRP
