Programme: NExtSEEK
SEEK ID: https://fairdomhub.org/projects/532
Public web page: Not specified
Organisms: No Organisms specified
FAIRDOM PALs: No PALs for this Project
Project created: 24th Mar 2026
Related items
- People (1)
- Programmes (1)
- Institutions (1)
- Investigations (1)
- Studies (1)
- Assays (6)
- Data files (1)
- SOPs (3)
- Sample types (0+5)
- Samples (23)
Projects: MIT SRP, Hi-IMPAcTB, MetNet, Endometriosis, Cancer Systems Biology Consortium (CSBC), Shoulders Lab, NExtSEEK Independent Projects
Web page: https://nextseek.mit.edu/
ROR ID: Not specified
Department: Not specified
Country:
United States
City: Not specified
Web page: Not specified
Submitter: Charles Demurjian
Studies: IMPACT OF FLUORESCENT DYES ON MUTATIONS IN NEXT GENERATION SEQUENCING
Assays: All Metadata, Genome Alignment - Data Linked, Library Prep - Metadata, Mutational Spectral Analysis - Data Linked, Short Read Sequencing - Data Linked, Variant Calling - Data Linked
Snapshots: No snapshots
Vincent L. Butty, Pranav Patel, Stuart S. Levine

DOI:
Abstract: DNA labelling fluorescent dyes such as ethidium bromide have long been considered to be highly mutagenic during DNA replication. While recent studies have pushed back on this narrative, the intercalative nature of these dyes continues to raise the possibility that these dyes can induce mutations. The iconPCR instrument by n6tec uses fluorescent dyes to measure amplification in real time and to ...
Submitter: Charles Demurjian
Investigation: BioMicro Center
Assays: All Metadata, Genome Alignment - Data Linked, Library Prep - Metadata, Mutational Spectral Analysis - Data Linked, Short Read Sequencing - Data Linked, Variant Calling - Data Linked
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: BioMicro Center
Organisms: No organisms
SOPs: P.BMC-260326-V1_iconPCR-libraryPrep.docx
Data files: No Data files
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: BioMicro Center
Organisms: No organisms
SOPs: P.BMC-260326-V1_iconPCR-sequencing.docx
Data files: No Data files
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: BioMicro Center
Organisms: No organisms
SOPs: P.BMC-260326-V1_iconPCR-sequencing.docx
Data files: No Data files
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: BioMicro Center
Organisms: No organisms
SOPs: P.BMC-260326-V1_iconPCR-analysis.docx
Data files: No Data files
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: BioMicro Center
Organisms: No organisms
SOPs: P.BMC-260326-V1_iconPCR-analysis.docx
Data files: No Data files
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: BioMicro Center
Creator: Charles Demurjian
Submitter: Charles Demurjian
Investigations: BioMicro Center
Studies: IMPACT OF FLUORESCENT DYES ON MUTATIONS IN NEXT...
Assays: All Metadata
Creators: None
Submitter: Charles Demurjian
Investigations: BioMicro Center
Studies: IMPACT OF FLUORESCENT DYES ON MUTATIONS IN NEXT...
Assays: Mutational Spectral Analysis - Data Linked, Variant Calling - Data Linked
Creators: None
Submitter: Charles Demurjian
Investigations: BioMicro Center
Studies: IMPACT OF FLUORESCENT DYES ON MUTATIONS IN NEXT...
Assays: Library Prep - Metadata
Creators: None
Submitter: Charles Demurjian
Investigations: BioMicro Center
Studies: IMPACT OF FLUORESCENT DYES ON MUTATIONS IN NEXT...
Assays: Genome Alignment - Data Linked, Short Read Sequencing - Data Linked
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