A.FLOW-240917FLY-2
C2_Flow_NX_uninvolved_lung_UIDs.xlsx
https://immport.org/shared/study/SDY2540
D.FLOW-240412FLY-1303; D.FLOW-240412FLY-1304; D.FLOW-240412FLY-1305; D.FLOW-240412FLY-1306; D.FLOW-240412FLY-1307; D.FLOW-240412FLY-1308; D.FLOW-240412FLY-1309; D.FLOW-240412FLY-1310; D.FLOW-240412FLY-1311; D.FLOW-240412FLY-1322; D.FLOW-240412FLY-1323; D.FLOW-240412FLY-1324; D.FLOW-240412FLY-1406; D.FLOW-240412FLY-1407; D.FLOW-240412FLY-1408; D.FLOW-240412FLY-1507; D.FLOW-240412FLY-1508; D.FLOW-240412FLY-1509; D.FLOW-240412FLY-1510; D.FLOW-240412FLY-1511; D.FLOW-240412FLY-1512; D.FLOW-240412FLY-1518; D.FLOW-240412FLY-1519; D.FLOW-240412FLY-1520; D.FLOW-240412FLY-1533; D.FLOW-240412FLY-1534; D.FLOW-240412FLY-1535; D.FLOW-240412FLY-1536; D.FLOW-240412FLY-1537; D.FLOW-240412FLY-1538; D.FLOW-240412FLY-1539; D.FLOW-240412FLY-1540; D.FLOW-240412FLY-1541; D.FLOW-240412FLY-1546; D.FLOW-240412FLY-1547; D.FLOW-240412FLY-1548; D.FLOW-240412FLY-1558; D.FLOW-240412FLY-1559; D.FLOW-240412FLY-1560; D.FLOW-240412FLY-1561; D.FLOW-240412FLY-1562; D.FLOW-240412FLY-1563; D.FLOW-240412FLY-1565; D.FLOW-240412FLY-1566; D.FLOW-240412FLY-1570; D.FLOW-240412FLY-1333; D.FLOW-240412FLY-1334; D.FLOW-240412FLY-1335; D.FLOW-240412FLY-1342; D.FLOW-240412FLY-1343; D.FLOW-240412FLY-1344; D.FLOW-240412FLY-1345; D.FLOW-240412FLY-1346; D.FLOW-240412FLY-1347; D.FLOW-240412FLY-1348; D.FLOW-240412FLY-1349; D.FLOW-240412FLY-1350; D.FLOW-240412FLY-1356; D.FLOW-240412FLY-1357; D.FLOW-240412FLY-1358; D.FLOW-240412FLY-1359; D.FLOW-240412FLY-1360; D.FLOW-240412FLY-1361; D.FLOW-240412FLY-1374; D.FLOW-240412FLY-1375; D.FLOW-240412FLY-1376; D.FLOW-240412FLY-1377; D.FLOW-240412FLY-1378; D.FLOW-240412FLY-1379; D.FLOW-240412FLY-1212; D.FLOW-240412FLY-1213; D.FLOW-240412FLY-1214; D.FLOW-240412FLY-1275; D.FLOW-240412FLY-1276; D.FLOW-240412FLY-1277; D.FLOW-240412FLY-1278; D.FLOW-240412FLY-1280; D.FLOW-240412FLY-1293; D.FLOW-240412FLY-1294; D.FLOW-240412FLY-1295; D.FLOW-240412FLY-1296; D.FLOW-240412FLY-1297; D.FLOW-240412FLY-1298; D.FLOW-240412FLY-1179; D.FLOW-240412FLY-1180; D.FLOW-240412FLY-1181; D.FLOW-240412FLY-1219; D.FLOW-240412FLY-1220; D.FLOW-240412FLY-1221; D.FLOW-240412FLY-1231; D.FLOW-240412FLY-1232; D.FLOW-240412FLY-1233; D.FLOW-240412FLY-1234; D.FLOW-240412FLY-1235; D.FLOW-240412FLY-1236; D.FLOW-240412FLY-1237; D.FLOW-240412FLY-1238; D.FLOW-240412FLY-1239; D.FLOW-240412FLY-1242; D.FLOW-240412FLY-1243; D.FLOW-240412FLY-1244; D.FLOW-240412FLY-1245; D.FLOW-240412FLY-1246; D.FLOW-240412FLY-1247; D.FLOW-240412FLY-1248; D.FLOW-240412FLY-1249; D.FLOW-240412FLY-1262; D.FLOW-240412FLY-1263; D.FLOW-240412FLY-1264
https://fairdomhub.org/sops/754
FlowJo v10.8.1
Amy Fraser
Creators and SubmitterViews: 3
Created: 17th Sep 2024 at 20:20
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Projects: Hi-IMPAcTB, MIT SRP, MetNet, Endometriosis, Cancer Systems Biology Consortium (CSBC)
Institutions: Massachusetts Institute of Technology
Projects: Hi-IMPAcTB
Web page: https://www.niaid.nih.gov/research/immune-mechanisms-protection-mycobacterium-tuberculosis
About
This project houses all the publicly available datasets generated by the Hi-IMPAcTB consortium over the course of its 7+ years.
What is Hi-IMPAcTB?
Hi-IMPAcTB is an ambitious endeavor bringing together a team of international, interdisciplinary researchers to improve our understanding of host-pathogen interactions in the context of tuberculosis (TB). Funded by a multi-center contract from the NIH, the long-term goal of the consortium is to enable principled vaccine design by improving ...
Programme: IMPAcTB
Public web page: https://grantome.com/grant/NIH/75N93019C00071-0-9999-1
Submitter: Dikshant Pradhan
Studies: CD4+ T cells are homeostasis regulators during Mtb reinfection, CD8+ lymphocytes are critical for early control of tuberculosis in macaques, Fc-FcγR interactions shift alveolar macrophage metabolism to promote Myc..., Fc-engineered antibodies leverage neutrophils to drive control of Mycoba..., Humoral correlates of protection against Mycobacterium tuberculosis foll..., Immune cells in bronchoalveolar lavage fluid of Ugandan adults who resis..., Multi-modal data integration using Markov Field graphical networks predi..., Multimodal profiling of lung granulomas in macaques reveals cellular cor..., Mycobacterium tuberculosis-specific antibodies detect progression to act..., Robust IgM responses following intravenous vaccination with Bacille Calm..., Specific CD4+ T cell phenotypes associate with bacterial control in peop...
Assays: All Metadata, All Metadata, All Metadata, All Metadata, All Metadata, Anti-Microbial Assay – Metadata, Antibody Challenge - Metadata, Antibody Titer - Data Linked, Antibody Titer Analysis - Data Linked, Antibody-Dependent Cellular Phagocytosis - Data Linked, Antibody-Dependent Cellular Phagocytosis - Data Linked, Antibody-Dependent Cellular Phagocytosis Analysis - Data Linked, Antibody-Dependent NK Cell Activation - Data Linked, Antibody-Dependent NK Cell Activation Analysis - Data Linked, Antibody-Dependent Neutrophil Phagocytosis - Data Linked, Antibody-Dependent Neutrophil Phagocytosis - Data Linked, Antibody-Dependent Neutrophil Phagocytosis Analysis - Data Linked, Antibody-dependent Cellular Phagocytosis - Data Linked, Antibody-dependent Complement Deposition - Data Linked, Antibody-dependent NK Cell Activation - Data Linked, Antibody-dependent Neutrophil Phagocytosis - Data Linked, Bacterial Challenge - Metadata, Bacterial Extraction - Metadata, Bacterial Extraction - Metadata, Bacterial Survivability Restriction Assay - Data Linked, DNA Extraction - Metadata, Digitally Barcoded Mtb Matrix Analysis - Data Attached, Digitally Barcoded Mtb Matrix Analysis - Data Attached, ELISA - Data Linked, FC Receptor Binding - Data Linked, FC Receptor Binding Analysis - Data Linked, FC Receptor Binding Assay - Data Linked, Flow Cytometry - Data Linked, Flow Cytometry - Data Linked, Flow Cytometry - Data Linked, Flow Cytometry - Data Linked, Flow Cytometry Analysis - Data Attached, Flow Cytometry Analysis - Data Linked, Flow Cytometry Analysis - Data Linked, Flow Cytometry Analysis - Data Linked, Flow Cytometry Processing – Data Attached, Flow Cytometry – Data Linked, Functional Assay – Metadata, Glycosylation Assay - Data Linked, Immunohistochemistry - Data Linked, Immunohistochemistry – Data Linked, Library Creation – Metadata, Library Prep - Metadata, Library Prep - Metadata, Linear Mixed Model - Data Linked, Luminex - Data Linked, Luminex Assay – Metadata, Luminex Data Processing – Data Attached, Model Validation, NHP Necropsy – Metadata, NHP Tissue Collection – Metadata, PET-CT Scan - Data Linked, PET-CT Scan Analysis – Data Linked, PET-CT Scan – Data Linked, PET/CT Scan - Data Linked, PET/CT Scan - Data Linked, Patient Visit - Metadata, Patient Visit - Metadata, Patient Visit - Metadata, Patient Visit - Metadata, Patient Visit - Metadata, Patient Visit - Metadata, Patient Visit - Metadata, Patient Visit – Metadata, Patient Visit – Metadata, Short Read Sequencing - Data Linked, Short Read Sequencing - Data Linked, Single Cell Clustering Analysis - Data Linked, Single Cell Clustering Analysis – Data Linked, Single Cell Expression Analysis - Data Linked, Single Cell Expression Analysis - Data Linked, Single Cell Expression Analysis - Data Linked, Single Cell Expression Matrix Analysis – Data Linked, Single Cell Sequencing Analysis – Data Linked, Single Cell Sequencing – Data Linked, Single Cell Sequencing – Data Linked, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Collection - Metadata, Tissue Extraction - Metadata, Tissue Extraction – Metadata, Titer Assay - Data Linked, Titer Assay - Data Linked, Titer Assay Analysis - Data Linked
Shu Wang, Amy J Myers, Edward B Irvine, Chuangqi Wang, Pauline Maiello, Mark A Rodgers, Jaime Tomko, Kara Kracinovsky, H. Jacob Borish, Michael C Chao, Douaa Mugahid, Patricia A. Darrah, Robert A. Seder, Mario Roederer, Charles A Scanga, Philana Ling Lin, Galit Alter, Sarah M Fortune, JoAnne L Flynn, Douglas A Lauffenburger
Paper Link: https://doi.org/10.1101/2024.04.13.589359
Link to Model Validation Datasets: https://fairdomhub.org/studies/1198
Abstract: ...
Submitter: Charles Demurjian
Investigation: IMPAcTB
Assays: All Metadata, Antibody Titer - Data Linked, Antibody Titer Analysis - Data Linked, Flow Cytometry - Data Linked, Flow Cytometry Analysis - Data Linked, Model Validation, PET/CT Scan - Data Linked, Patient Visit - Metadata, Tissue Collection - Metadata
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: IMPAcTB
Training data for this Model is available: https://fairdomhub.org/studies/1198
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: IMPAcTB
Batch sample publishing
Creator: Charles Demurjian
Submitter: Charles Demurjian
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