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SysMO356 Disease Maps277 Independent Projects187 ERASysAPP139 Era CoBioTech111 de.NBI Systems Biology Service Center (de.NBI-SysBio)86 FAIRDOM70 The Digital Salmon56 nfdi4health - German National Research Data Infrastructure for Personal Health Data42 e:Bio38 EU Projects36 HUMET32 NIBSys30 COMBINE (Computational Modeling in Biology Network)29 DFG founded projects28 dCod 1.0: decoding systems toxicology of cod26 DLN - OXYMOD26 SynthSys22 WooBAdh22 LiSyM - Systems Medicine of the Liver21 CoolWine19 FAIR Biocatalysis18 German Association for Medical Informatics, Biometry and Epidemiology (GMDS)17 M-era.Net 3D4D215 New strategies to detect cancers in carriers of mutations in RB1: blood tests based on tumor-educated platelets, or extracellular vesicles.15 BlueBio ERA-NET COFUND14 e:med13 Newcastle University Systems Modelling of Ageing13 BioZEment12 Auromega12 ISBE.NL service programme12 Model repository for M4 (Make Me My Model) clients of ISBE11 Druglogics11 SAFE-Aqua10 Systems Biology Programme9 BioSpec9 Hellenic Foundation for Research and Innovation - Supporting academic Staff and Researchers9 SARCHI: Mechanistic modelling of health and epidemiology8 MS_DILI8 Drug development for neglected parasitic diseases8 Covid-19 disease map - Bioinformatics analysis and computational modelling8 RNA Systems Biology Lab6 Modelling Light Control of Development5 ERNEST - European Research Network on Signal Transduction5 C19DM-Neo4j5 MIT Superfund Research5 IMPAcTB5 Halliday Lab4 Cancer drug discovery preclinical research4 Experimental Transplantation Surgery4 Journals3 Synthetic Biology HHU3 Macrophage logical modeling3 iPlacenta: ​A European Union Horizon 2020 innovative training network (ITN)3 COST ACTION CA21111 - OneHealthdrugs (One Health drugs against parasitic vector borne diseases in Europe and beyond) 3 Breast Cancer Simulation2 Innate immunity2 ILVO test2 DiaPhotosynth2 Test program2 Hallmarks of cancer 2 Gygli Group2 CLIMAQUA2 NL-Bioimaging: FAIR-DM 2 Wellcome Trust Development Grant - Unshackling membrane proteins ...2 Mathematical modelling of the morphological transition of Pseudomonas aeruginosa1 Proteome Centre Tuebingen1 Laboratory of the /cytoplasmic/ heredity (Institute of Genetics and Cytology, NAS Belarus)1 Earth and Life Institute1 The Novo Nordisk Foundation Center for Biosustainability1 API_testing_projects1 Skin Ageing and Senescence1 Thesis AHG 20191 KOCH1 GPSLab testing Programme1 Interface MIAPPE / BrAPI1 Data_Management_lessons1 Ugent data stewards1 MRRDEP1 Pseudomonas putida metabolism1 Biomics Platform1 3DMM2O1 NORCE Environment Test1 IDPfun Test programme1 Von Hippel-Lindau (VHL) Tumor Suppressor research programme1 Systems Brewology1 An overview of systematic reviews of treatment of polycystic ovary syndrome with Chinese medicine1 Thermodynamics and kinetics for Biology1 Supplemental Data for "Why did the eyewall replacement cycle in Trami terminate rapidly? "1 Combined therapy involving Scalp Acupuncture and Treadmill Training Inhibits Neuronal Apoptosis in Cerebral Ischemia Rats by regulating cIAP11 Testing 1, 2, 31 Clostridium beijerinckii1 Electroacupuncture preconditioning reduces oxidative stress in the acute phase of cerebral ischemia-reperfusion in rats by regulating iron metabolism pathways1 The Effect of Nape Acupuncture Combined with Rehabilitation Training on Dysphagia After Stroke1 Aneurinibacillus thermoaerophilus CCM 8960 metabolic pathways model1 Public1 JUANGMC1 MPIB1 RNA-seq1 MultiDefence - sLoLa1 SB2CLab1 TCGA-reanalysis1 More...

COVID-19 Disease Map277 PSYSMO52 DigiSal47 MESI-STRAT47 FAIRDOM user meeting45 BaCell-SysMO40 SysMO-LAB40 GenoSysFat40 Kinetics on the move - Workshop 201640 PoLiMeR - Polymers in the Liver: Metabolism and Regulation39 nfdi4health - German National Research Data Infrastructure for Personal Health Data39 ICYSB 2015 - International Practical Course in Systems Biology37 CC-TOP36 TRANSLUCENT35 STREAM35 HUMET Startup32 EmPowerPutida32 COVID-19 related studies and tools in Germany32 COSMIC31 SUMO29 SCyCode The Autotrophy-Heterotrophy Switch in Cyanobacteria: Coherent Decision-Making at Multiple Regulatory Layers28 KOSMOBAC27 FAIRDOM27 Rhodolive27 SulfoSys26 Systems toxicology of Atlantic cod26 OXYMOD26 BESTER26 COMBINE Multicellular Modelling25 SYSTERACT22 SEEK tutorial for DigiSal22 SCaRAB21 SulfoSys - Biotec21 MOSES20 TRALAMINOL19 INDIE - Biotechnological production of sustainable indole19 CoolWine19 iRhythmics18 SNAPPER: Synergistic Neurotoxicology APP for Environmental Regulation18 IMOMESIC17 SBEpo - Systems Biology of Erythropoietin17 EnzymeML17 GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik"17 MIX-UP17 Working Group Nicole Radde17 INBioPharm16 SilicoTryp15 SysVirDrug15 SysMetEx15 MetApp15 Environmentally-friendly bioadhesives from renewable resources (WooBAdh)15 NIRBTEST15 Sustainable co-production14 C1Pro14 AquaHealth (ERA-BlueBio)14 SysMO DB13 MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine13 HOTSOLUTE13 FAIRDOM Community Workers13 SysMilk12 WURSynBio12 BioZEment 2.012 Auromega12 Xenophiles Systems Biology12 XyloCut11 Standardization of enzyme-catalyzed reaction measurement11 Standardization of enzyme-catalyzed reaction modelling11 de.NBI-SysBio10 Colosys10 SAFE-Aqua10 PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops10 Project Coordination10 ROBUSTYEAST9 LEANPROT9 Example use cases9 EraCoBiotech 2 nd call proposal preparation9 FAIRDOM & LiSyM & de.NBI Data Structuring Training9 SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture9 SynBio4Flav9 _p_stRT9 CEPOPA - Development of sustainable chemoenzymatic processes for optically pure amines from alcohols or alkynes9 SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke9 WP 4: Evaluation of drug activity against multiple life cycle stages of malaria parasites9 Noisy-Strep8 CropClock8 MS_DILI8 INCOME8 NMTrypI - New Medicines for Trypanosomatidic Infections8 ModeleXchange initiative8 Covid-19 Interferon pathway modelling and analysis8 WP 5: Intradermal 3D drug device administration8 WineSys7 ExtremoPharm7 Chronic Liver Disease Progression (LiSyM-DP - Pillar II)7 Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III)7 NTNU Health Druglogics7 Systems modelling age-related changes in the maintenance of dermal extra-cellular matrix: mechanisms and interventions7 NAD COMPARTMENTATION7 WP 2: Antimalarial drug encapsulation7 EbN1 Systems Biology7 DigiSal-BT81217 Enzymatic biorecycling of PET (PETzyme)7 ZucAt6 Early Metabolic Injury (LiSyM-EMI - Pillar I)6 The Hedgehog Signalling Pathway (LiSyM-JGMMS)6 Millar group6 CausalDB6 PlaSMo model repository6 Dynamic interplay between nuclei and mitochondria in ageing cells6 Lipofungi6 DeepHyperSpec6 Bio4Fuels6 ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato6 BioCreative VII6 WP 3: Drug release kinetics study6 Whole body modelling of glucose metabolism in malaria patients5 WG Infrastructure for Translational Research5 TiMet5 GB-XMap: Assessing the risk of gut-brain cross-diseases Investigating the gut-brain-axis5 Light and plant development5 LIGNOLIPP5 ERNEST Mapping Group Pilot Study5 Modelling COVID-19 epidemics5 C19DM-Neo4j5 MIT SRP5 IMPAcTB5 WP 1: Biodegradable and responsive polymer matrix5 LiSyM Core Infrastructure and Management (LiSyM-PD)4 Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP)4 Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF)4 pISA-tree4 Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW)4 Multiscale modelling of state transitions in the host-microbiome-brain network4 Regulation of flowering time in natural conditions4 Light control of leaf development4 Stress granules4 Simulation Foundries4 ComPASs - Common Pathways in Amyotrophic Lateral Sclerosis (ALS) and Spinal Muscular Atrophy (SMA)4 Mass spectrometry proteomics for biomarker discovery4 SteaPKMod4 SABIO-VIS4 RootBook3 Molecular Systems Biology3 Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV)3 Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM)3 HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato3 Computational pathway design for biotechnological applications3 Bergen(Ziegler lab) project AF-NADase3 NAD phylogeny3 Outreach - Senescence RStudio-Shiny application3 Outreach - Simulation of cellular senescence using an agent based modelling approach3 CML for thermophysical properties of mixtures3 miRiAD - exploring the role of microRNAs in T cell function and anti-viral defence3 LungCARD - Blood test for clinical therapy guidance of non-small cell lung cancer patients3 Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population3 Reduce Complexity (RCO) reconstruction3 Ultreia3 C19DM - Macrophage logical model3 Selective Destruction in Ageing3 The BeeProject3 WG1 - Compound libraries coordination and integration of compound design3 WG2 - Integration of early phase studies and low environmental impact actions3 SysMO Funders2 ErasysApp Funders2 Make Me My Model2 Service to Universidade Católica Portugues with respect to their Molecular Insight into Autism Spectrum Disorder (ASD) model (Active NOW)2 Service to Slovenia with respect to their Protease signaling network in neurodegeneration model (Active NOW)2 MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection2 POP - the Parameter Optimisation Problem2 Crossover Research 2.02 Extremophiles metabolsim2 Yeast glycolytic oscillations2 Are microRNAs key mediators of cartilage destruction in osteoarthritis?2 NAMPT affinity2 Outreach - Simulation of breast cancer development using an agent based modelling approach2 Outreach - Breast Cancer RStudio-Shiny application2 CF transcriptome2 UnCentre - Unlocking satellite DNA and centromere structure in vertebrate chromosomes2 Toggle switch2 Genetic diversity and forage yield of perennial ryegrass2 Finding interaction partners of thylakoid membrane insertase2 Characterization of P. tricornutum chloroplast protein mutants2 Testing FairdomHub functionality2 MPW-Val2 Consensus Hallmark Annotation2 CoVIDD - Coronavirus interactions in drug discovery - optimization and implementation2 Towards Reproducible Enzyme Modeling2 Establishing an innovative and transnational feed production approach for reduced climate impact of the aquaculture sector and future food supply2 Molecular characterization and angiogenic properties of extracellular vesicles in healthy and preeclamptic amniotic fluid2 Thymidylate synthase dimer dissociation2 Overexpression of microRNAs miR-25-3p, miR-185-5p and miR-132-3p in Late Onset Fetal Growth Restriction, Validation of Results and Study of the Biochemical Pathways Involved2 SDBV ephemeral data exchanges2 Heat stress response of the red-tide dinoflagellate Prorocentrum cordatum2 The nucleus of Prorocentrum cordatum2 NL-Bioimaging FAIR Metadata Templates2 WG5 - Promote dissemination2 WG6 - Promote the transfer of knowledge2 Cell4Chem2 FAIR Functional Enrichment2 WP2.4 - Block copolymers for tethering to surfaces2 Glucose metabolism in cancer cell lines2 Manchester Institute for Biotechnology1 Systo models1 Service to Milano-Bicocca with respect to their ATP-ROS model (Active NOW)1 Service to University of Lisbon (Portugal) with respect to their CFTR maturation model (Active NOW)1 Service to LCSB (Luxembourg) with respect to ROS management in Parkinson’s disease and cancer model (Active NOW)1 Service to University of Duisburg- Essen (Germany): with respect to their The Yin-Yang of Metabolism; Endometatoxicity (YYME) model (Active NOW)1 Service to Sheffield University (UK): with respect to Mitochondrial perfect adaptation model (Active NOW)1 Service to Sanquin (Amsterdam): with respect to Modelling of acute and chronic inflammation (Prospective)1 Service to Munich (Germany): with respect toCharged peptide to charged membrane binding model (Prospective)1 Training Hunfeld1 Mathematical modelling of the antibiotic-induced morphological transition of Pseudomonas aeruginosa1 ROS detailed model for MSB manucript1 Steroid biosynthesis1 Proteogenomics of melanoma1 DCM1 Lobet's group1 Escherichia coli chemical product tolerance1 Fairdom Hub documents1 RStudio-Shiny and Java_API connection testing1 Thesis1 BIOMICRO PROJECT1 Agro-ecological modelling1 GPSLab testing1 Interface MIAPPE / BrAPI1 Unlock1 Test Project1 Mapping Disease Modules Overlaps in Biological Networks1 RDM awareness1 Perennial ryegrass1 MPIEvolBio-SciComp1 MRRDEP1 Acetyl-coa production in Pseudomonas putida1 Biomics Projects1 Thrust C21 Study of Pleiomorphic Ensembles1 Model Driven Prime Editing1 PULSE 2.01 Plant optogenetics1 Hidden project1 BiocompUP Test Project1 Hidden project 21 Towards a mechanistic understanding of von Hippel-Lindau syndrome in different tissues1 The Beer Project1 Backup Transcriptomic data1 Test Project (dummy)1 Translational Bioinformatics1 Medical Biometry, Epidemiology, Medical Informatics1 An overview of systematic reviews of treatment of polycystic ovary syndrome with Chinese medicine1 Thermodynamics1 Non equilibrium thermodynamics1 Book on Thermodynamics, and kinetics1 Supplemental Data for "Why did the eyewall replacement cycle in Trami terminate rapidly? "1 Scalp Acupuncture and Treadmill Training Inhibits Neuronal Apoptosis Through Activating cIAP1 in Cerebral Ischemia Rats1 Hello1 Clostridium beijerinckii pan-genome1 Bio-crop1 ORHIZON1 Coastal Data1 Electroacupuncture preconditioning reduces oxidative stress in the acute phase of cerebral ischemia-reperfusion in rats by regulating iron metabolism pathways1 _p_RNAinVAL1 hybrid sequencing1 Teaching Alien Biology1 HOST-PAR1 Outdated material1 The Effect of Nape Acupuncture Combined with Rehabilitation Training on Dysphagia After Stroke: A Meta-analysis1 tst1 tst21 Boolean modeling of Parkinson disease map1 Aneurinibacillus thermoaerophilus CCM 8960 metabolic pathways model1 Orphan cytochrome P450 20a1 CRISPR/Cas9 mutants and neurobehavioral phenotypes in zebrafish1 AGENSI1 Viral Metagenomic1 Public project1 JUANGMC1 Synthetic biology in Synechococcus for bioeconomy applications (SynEco)1 testproject1 Test project1 Comparative Proteome Profile of Placental Sub-anatomical regions1 Fusion-fission-mitophagy1 PHENET1 LiceVault1 Testing tools for research data management1 UMRPégase1 Investigation of the activity of antisense oligonucleotides targeting multiple genes1 DeCipher1 middle ear1 datamgmt1 MultiDefence - sLoLa1 Institut Pasteur's projects1 qpcr1 MRC-UNICORN1 Unshackling Membrane Protein Research: New Amphiphilic Copolymers for Extraction of Stable, Active Membrane Proteins1 BioDynamics1 Playground1 WG3 - Coordination of in vitro-to-in vivo translation of OneHealth leads and candidates1 WG4 - Integration of R&D process-environmental studies and translation in informed whitepaper1 Test project for Sciender1 qPCR1 Artificial organelles_Pathogen digestion1 Supplementary Information 2 associated with the manuscript entitled " Label free Mass spectrometry proteomics reveals different pathways modulated in THP-1 cells infected with therapeutic failure and drug resistance Leishmania infantum clinical isolates"1 PTPN11 mutagenesis1 WP1 - Structure-activity relationships of amphiphilic copolymers1 WP2.1 - Mono-chain-end functional amphiphilic copolymers1 WP2.2 - Hetero di-chain-end functional amphiphilic copolymers1 WP2.3 - Meta-stable amphiphilic copolymers1 WP2.5 - Fusion of SMALPs1 WP2.6 - SMALPs for photosynthetic research1 WP3 - Scalability of polymer production process1 WP4 - Community engagement and technical advice1 The deregulated interplay of complement system and antioxidant activity as a driver of adverse pregnancy outcomes1 Supplementary Information 2 associated with the manuscript entitled "Label free Mass spectrometry proteomics reveals different pathways modulated in THP-1 cells infected with therapeutic failure and drug resistance Leishmania infantum clinical isolates"1 iPlacenta- Placenta on a chip1 Pan-cancer multiSOM project1 Near Surface Wave-Coherent Measurements of Temperature and Humidity1 More...

Norwegian University of Science and Technology57 Norwegian University of Life Sciences57 Wageningen University & Research44 University of Stuttgart41 University of Bergen38 University of Groningen33 University of Rostock31 Heidelberg Institute for Theoretical Studies (HITS gGmbH)29 SINTEF29 University of Edinburgh29 University of Heidelberg22 Kinetics on the move Workshop at HITS22 University of Amsterdam21 Manchester Centre for Integrative Systems Biology, University of Manchester20 University of Tübingen20 German Cancer Research Center (DKFZ)19 University of Freiburg18 Imperial College London17 VU University Amsterdam17 University of Greifswald17 University of Newcastle17 Luxembourg Centre for Systems Biomedicine (LCSB)17 University of Aberdeen16 University Duisburg-Essen16 Universidade de Santiago de Compostela16 University of Braunschweig14 University of Leiden14 ETH Zurich13 CSIC Madrid12 University of Bonn12 University of Goettingen12 Institut Curie12 University Maastricht12 Rostock University Medical Centre12 University of Sheffield11 University of Warwick11 University of Manchester - Department of Computer Science11 University of Luxembourg11 CSIC11 National Institute of Biology11 Humboldt-Universität zu Berlin10 Forschungszentrum Jülich10 UNIBI: Bielefeld University10 University of Gothenburg10 Institut Pasteur10 Helmholtz Centre for Infection Research Braunschweig9 Chalmers University of Technology9 Charité University Medicine Berlin9 Stellenbosch University9 University of Crete9 Technische Universität Darmstadt9 University of Ulm8 Universitat Rovira i Virgili8 University Medical Center Göttingen8 University Medicine of Greifswald8 National Institute for Infectious Diseases "L.Spallanzani"8 Amsterdam UMC8 Autonomous University of Barcelona7 Max Planck Institute for Dynamics of Complex Technical Systems7 University of Nottingham7 University of Vienna7 European Molecular Biology Laboratory7 Ontario Institute for Cancer Research7 University of Erlangen-Nuernberg6 University of Stellenbosch6 Lund University6 Indiana University Bloomington6 University of Leipzig - Institute for Medical Informatics, Statistics and Epidemiology (IMISE)6 RNA Systems Biology Lab - BioISI/FCUL6 ZB MED - Information Centre for Life Sciences6 University Medical Centre Groningen5 University of Duesseldorf5 University of Glasgow5 University of Cologne5 Heinrich Heine University of Düsseldorf5 Universität Konstanz5 Universitity Duisburg-Essen5 University of Oslo5 Novosibirsk State University5 European Institute for Systems Biology and Medicine5 LifeGlimmer GmbH5 BASF5 University of Exeter5 University of Kassel5 Düzen Biological Sciences R&D and Production Company5 Earlham Institute5 University of Innsbruck5 CSIC Barcelona - Consejo Superior de Investigaciones Científicas5 Barcelona Supercomputing Center5 The European Bioinformatics Institute < EMBL-EBI5 Harvard Medical School5 Institut Pasteur de Tunis5 Helmholtz Zentrum München / Institute of Experimental Genetics5 RWTH Aachen University5 Massachusetts Institute of Technology5 Medical University Vienna4 University of Cordoba4 University of Dortmund4 Ludwig-Maximilians University of Munich4 University of Tuebingen4 Technische Universität Dresden4 INSA Toulouse4 Institute of Cytology and Genetics4 Technische Universität Berlin (TU Berlin)4 Instituto de Tecnologia Química e Biológia - Universidade Nova de Lisboa4 CRG Centre for Genomic Regulation4 University College London (UCL)4 National Center for Genetic Engineering and Biotechnology4 ICAHN Icahn School of Medicine at Mount Sinai4 Green Biologics Ltd4 Leuphana University of Lüneburg4 National Institute of Chemistry (Slovenia)4 Asociación para la Investigación, Desarrollo e Innovación del sector Agroalimentario (AIDISA)4 ENEA - The Agenzia nazionale per le nuove tecnologie, l'energia e lo sviluppo economico sostenibile4 PROZOMIX4 Keio University4 University of Rome Tor Vergata4 Swiss Institute of Bioinformatics4 BIPS - Leibniz-Institut für Präventionsforschung und Epidemiologie4 Università degli Studi di Modena e Reggio Emilia (UNIMORE)4 Medical University Innsbruck4 Leibniz-Institut für Polymerforschung Dresden e. V.4 Carl von Ossietzky University of Oldenburg Institute for Chemistry and Biology of the Marine Environment (ICBM)4 Institute of Physiology Academy of Sciences3 ETH Zurich & Basel / The Scientific IT Services (SIS) division3 Max-Planck-Institute of Biochemistry Martinsried3 University of Hannover3 University of London UCL3 University of Newcastle-upon-Tyne3 University of Applied Sciences Koblenz, Rhein Ahr Campus3 University of Marburg3 Otto-von-Guericke University Magdeburg3 University Bielefeld3 University of Zürich3 Leiden University Medical Center3 Linnaeus University3 Ruhr University Bochum3 Latvia University of Agriculture3 Ecole Polytechnique Fédérale de Lausanne (EPFL)3 Winogradsky Institute of Microbiology, Federal Research Center “Biotechnology", Russian Academy of Sciences3 FAIRDOM User meeting3 Humboldt University Berlin3 Universität Leipzig - Medizinische Fakultät - Institut für Biochemie3 Max-Planck-Institut für Molekulare Pflanzenphysiologie3 PATH - Patients' Tumor Bank of Hope3 Vall d´Hebron Institute of Oncology (VHIO)3 ICB Helmholtz Center Munich3 PROCESSIUM3 Université Clermont Auvergne (UCA)3 Sunchem Italy3 Leibniz Institute for Farm Animal Biology (FBN)3 John Innes Centre3 Consiglio Nazionale delle Ricerche3 University of Ghent3 Gladstone Institutes3 Policlinico Universitario Agostino Gemelli IRCCS3 University of Évry Val d'Essonne3 University of Pittsburgh3 Fundación Progreso y Salud3 Monash University3 Centre national de la Recherche Scientifique (CNRS)3 Oregon Health & Science University (OHSU)3 University of Nebraska-Lincoln3 NYU Grossman School of Medicine3 Autonomous University of Madrid3 Hamburg University of Technology3 Pacific Northwest National Laboratory3 BIH - Berlin Institute of Health - Core unit eHealth and Interoperability3 German Institute of Human Nutrition3 Elsevier3 Thetis3 Helmholtz Zentrum für Umweltsforschung (UFZ)3 University of Pretoria3 Sofia University3 Johnson Matthey3 University College Dublin3 Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures3 CSIC Vigo2 INBIOTEC Leon2 University of Essex2 Queen's University Belfast2 eGene Biotechnologie GmbH2 Beuth University of Applied Sciences Berlin2 Technical University of Munich2 Utrecht University2 Università della Svizzera Italiana2 TATAA BioCenter2 University of Cyprus2 University of Milano-Bicocca2 Freie Universität Berlin2 Delft University of Technology (DUT)2 Competence Center of Food and Fermentation Technologies2 University of Hohenheim2 Cargill2 IDIBAPS2 KAIST2 Caltech2 geneXplain GmbH2 University Medical Center Hamburg - Eppendorf Hamburg2 Liverpool John Moores University2 Consejo Superior de Investigaciones Científicas2 Leibniz-Institut für Arbeitsforschung (IfADo)2 UW Biology - University of Washington2 Auckland Bioengineering Institute2 Oslo and Akershus University College2 De Duve Institute2 The Arctic University of Norway (UiT)2 Durham University2 PD-value B.V.2 Indear2 Axxence Aromatic GmbH2 Mimetas2 University of Copenhagen2 National Institute on Aging2 University of Ljubljana2 Université de Lorraine2 University of Washington, Environmental and Forest Sciences2 KTH Royal Institute of Technology2 INSTITUTE FOR PLANT MOLECULAR AND CELL BIOLOGY (IBMCP)2 University of Connecticut2 Biomax Informatics AG2 Hospital del Mar Research Institute (IMIM)2 INSERM2 KAUST2 Paris Brain Institute / Inria2 Sanofi R&D2 Shanghai University2 University of Florida2 Inria Saclay - Île-de-France2 Golestan University of Medical Sciences2 University of the Witwatersrand2 University of California, Los Angeles2 Aalborg University, Department of Planning2 College of Meteorology and Oceanography, National University of Defense Technology2 Sea & Sun Technology GmbH2 King AbdulAziz University2 Cape Peninsula University of Technology2 Ankara University2 National University of Ireland2 Karlsruhe Institute of Technology (KIT)2 Brno University of Technology2 Institut for Food and Environmental Research (ILU)2 INRAE2 University of Zagreb2 Tsinghua University2 Instituto de Investigación Sanitaria La Fe2 Manchester Institute of Biotechnology/ University of Manchester2 Experimental Transplantation Surgery, Department of General, Visceral and Vascular Surgery, University Hospital Jena2 NTNU2 LIACS2 CSIC Granada1 DSM Nutritional Products Ltd.1 Institut National de la Recherche Agronomique1 University of Stavanger1 Max-Planck-Institute for terrestrial Microbiology1 BBSRC1 Technical University of Denmark - Systems Biology1 Sigma Aldrich ( Swiss)1 NovaMechanics Ltd1 Technology Transfer Heidelberg GmbH1 Biobyte Solutions GmbH (BS)1 Chr-Hansen A/S (CH)1 Sinvent AS - SINTEF1 Griffin Discoveries BV1 Linköping University1 Syngenta Seeds GmbH1 Okayama University1 Buenos Aires1 Uni Basel1 Åbo Akademi University1 Institute for Experimental Internal Medicine1 University of Tokyo1 Max-Planck Institute for Molecular Genetics1 Stockholm University1 Radboud University Nijmegen1 Institute of Pathology1 Otto-von-Guericke-Universität Magdeburg1 IFIBYNE - Physiology, Molecular Biology and Neurosciences1 biotechrabbit GmbH1 Immanuel Kant Baltic Federal University (IKBFU)1 SYSBIO - Centre of Systems Biology1 Institute of Cytology and Genetics SB RAS1 Unicamp - University of Campinas1 MDC/BIMSB1 Centre for Digital Life Norway1 IDAEA-CSIC1 Vall d'Hebron Institut de Recerca (VHIR)1 Peter MacCallum Cancer Centre1 Standigm1 Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences1 Institute of Microbiology and Biotechnology, University of Latvia1 Nazarbayev University1 Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark1 ZonMw1 UPF1 JAPAN TOBACCO INC1 IDIBELL1 CEIT1 Centro de Investigación Príncipe Felipe1 University of Ulster1 Universitair ziekenhuis Antwerpen1 University Hospital Heidelberg1 Roche Diagnostics1 Université catholique de Louvain1 University of Cambrige1 AstraZeneca1 University of Lausanne1 University of Zurich1 Bilkent University1 Ingenza Ltd.1 Abengoa Research SL1 Infrastructure Systems Biology Europe1 Universitätsklinikum Leipzig1 Universitätsklinikum Dresden - Medizinische Klinik I, Bereich Gastroenterologie & Hepatologie1 RWTH Aachen University Hospital - Department of Internal Medicine III1 Bioinformatics MIlan Bicocca (BIMIB) - Università degli Studi di Milano Bicocca1 INRA Bordeaux-Aquitaine1 Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute (HKI)1 Vectron Biosolutions AS1 University of Birmingham1 University Hospital Schleswig-Holstein, Kiel, General Surgery1 Neuroimmun GmbH1 National Laboratory of Energy and Geology (LNEG)1 BIOCERES S.A.1 University of Michigan1 Beilstein Institut1 Iceni Diagnostics Ltd1 Bodegas Roda S.A.1 Evonik Industries AG1 VTT Technical Research Centre of Finland1 Fraunhofer-Institut für Chemische Technologie ICT1 Acies Bio1 MIT1 Kiel University1 Symrise1 University of Saarland1 Netherlands Cancer Institute1 University of St Andrews1 Howest University of Applied Sciences1 Max Planck Institute for Evolutionary Biology1 Technical University of Denmark1 Integrative BioInformatics Inc.1 CSIR-Institute of Genomics and Integrative Biology1 The International Clinical Research Center of St. Anne's University Hospital Brno1 Yenepoya University1 Riga Technical University1 American University of Sharjah1 Centre de Recherche en Cancerologie de Toulouse1 Centre for Research and Technology Hellas1 esqLABS GmbH1 Estonian Genome Centre, Institute of Genomics, University of Tartu1 Fundacion, Progreso y Salud1 German Center for Neurodegenerative Diseases (DZNE)1 Guy's and St Thomas' NHS Foundation Trust and King's College London1 Hasso-Plattner Institute/ TU Berlin1 IBM Research, Zurich1 Indraprastha Institute of Information Technology Delhi1 Institute for Globally Distributed Open Research and Education - IGDORE1 Mediterranean Institute for Life Sciences (MedILS)1 Morpho-Biomimicry research and innovation centre1 MRC-University of Glasgow Centre for Virus Research1 Systems Biology Institute (SBI)1 Università Cattolica del Sacro Cuore1 University of Lisbon1 University of Lyon1 University of Montpellier1 University of Rochester1 University of Surrey1 University of Western Australia1 US Environmental Protection Agency1 Biomathematica1 Institut de Recherche Saint Louis1 University of Lille1 BIOASTER1 National Institute of Immunology1 Accelera1 Forman Christian College (a chartered university)1 Uppsala University1 Cardiff University1 National Institute of Standards and Technology1 Mansoura Faculty of Medicine1 Lorraine Research Laboratory in Computer Science and its Applications (LORIA)1 University of Hamburg, Microbiology and Biotechnology1 Moredun Research Institute1 All India Institute of Medical Sciences, Kalyani1 Radboud University Medical Center1 Institute of Bioinfomratics1 Oregon State University1 University of Cape Town1 OROBIX Sarl1 ICESI University1 Shri Govindram Seksaria Institute of Technology and Science1 Universitat Pompeu Fabra1 MRC Laboratory of Molecular Biology1 University of Barcelona1 Zanjan University of Medical Sciences1 New York University1 University of Würzburg1 University of Northampton1 Robert Koch-Institut1 Network of Coordinating Centers for Clinical Studies in Germany (KKS network)1 Helmholtz Zentrum München1 University of Warsaw1 Instituto de Biologia Molecular e Celular (IBMC)1 Università degli Studi di Siena1 Università degli Studi di Padova1 Universidade Nova de Lisboa, FCT-NOVA1 Rhodes University1 Pondicherry University1 independent researcher1 National Institute of Advanced Industrial Science and Technology1 Warsaw University of Technology1 Institute of Public Health, University of Porto1 St11 PD-Value1 University of Eastern Finland (UEF)1 HLJUCM1 University of Turin1 National Institute of Informatics1 Afbi1 SBI University of Rostock1 Heilongjiang University of Chinese Medicine1 ILVO1 National University of Ireland, Galway1 Systems Biology Amsterdam1 INSTITUTO FEDERAL FARROUPILHA1 tst1 University of British Columbia1 Center for Free-Electron Laser Science (Uni Hamburg)1 NORCE1 RWTH Aachen University - Department ABBt, iAMB1 SOPREMA1 RWTH-AVT1 CIRAD1 NewHorizon1 Guizhou Provincial Center for Disease Control and Prevention1 University Medical Center Göttingen, Department of Medical Informatics1 Universität Bamberg1 Otto-Friedrich-University Bamberg, Fakultät für Wirtschaftsinformatik und Angewandte Informatik1 Institut de Génétique et de Biologie Moléculaire et Cellulaire1 Julius Kühn-Institut (JKI) Federal Research Centre for Cultivated Plants1 Faculty of Chemical Engineering and Technology1 Max-Planck-Institute for Human Development1 secarna pharmaceuticals GmbH & Co KG1 Cancer Registry Norway1 Technische Universität Braunschweig1 University of Applied Sciences Mittweida1 insilicotrials Technologies1 NMBU1 ut tyler1 Inland Norway University of Applied Sciences1 NORCE Norwegian Research Centre AS1 Universitat Politècnica de València1 Ural State Medical University1 Leibniz-Institut für Polymerforschung Dresden e.V.1 Università di Modena e Reggio Emilia1 Izmir Katip Celebi University Faculty of Pharmacy1 Josep Carreras Leukaemia Research Institute (IJC)1 European Research Executive Agency1 University of Dundee1 Institute of Molecular Biology NAS RA1 Coastal Carolina University1 European Bioinformatics Institute1 More...

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Molecular Biology124 Systems Biology98 Bioinformatics88 Microbiology78 Biochemistry65 Data Integration64 Mathematical modelling60 Curation58 Data Management52 Transcriptomics40 Genetics37 Databases32 Computational Systems Biology32 Data analysis32 Genomics29 Metabolic Engineering29 Proteomics27 Modeling26 Modelling24 Parameter estimation23 Dynamic modelling22 Metabolomics21 Molecular microbiology21 Dynamics and Control of Biological Networks21 Cell biology20 Software Engineering17 Python16 Bacillus subtilis16 standards15 Programming14 R13 Synthetic Biology12 Biotechnology12 Metabolic Networks12 Computational Biology12 carbon metabolism11 Network Analysis11 Fermentation10 protein-protein interactions10 Microarray analysis9 Mathematical and statistical modeling9 gene regulation9 Cell physiology9 Image analysis9 SBML8 functional protein expression8 Machine Learning8 Agent-based modelling7 Java7 Escherichia coli7 dynamics of biological networks7 Mathematics7 stress responses7 regulation of gene expression7 Bacterial Cell Biology7 Kinetic modelling7 Immunology7 metabolism7 Knowledge Management7 Regulatory Networks6 Data analysisMathematical modellingBioinformaticsSystems biology6 Cancer research6 Single Cell analysis5 dynamics of biological networks.5 Physics5 Mathematical modelling of biosystems and bioprocesses5 Signalling networks5 Stoichiometric modelling5 enzyme kinetics5 computational structural biology5 biocatalysis5 Ontology5 Project Management5 Streptococcus pyogenes4 protein secretion4 membrane biology4 Comparative Genomics4 Nonlinear Dynamics4 Statistical Physics4 Mathematical modelling of biological systems4 Anaerobic Microbiology4 Biophysics4 Clostridium4 carbon catabolite regulation in Gram positive bacteria4 Protein-DNA-interaction4 genome-scale modeling4 molecular modeling4 metagenomics4 Glycolysis4 Metabolic Models4 Liver4 quantative biology4 Lipids4 Visualization4 Ecotoxicology4 Plant biology4 photobiology4 plant biotechnology4 Deep Learning4 Text Mining4 Kinetics4 Pathway Analysis4 Saccharomyces cerevisiae3 Reactor models3 coupling metabolome and environome3 rapid sampling experiments3 bioreactor models3 Deterministic modelling of gene regulation networks3 translational control of gene expression3 phenotypic heterogeneity3 bistability3 metal ion homeostasis3 Escherichia coli Membrane protein Biochemistry3 Optimal experimental design3 Dynamic optimization.3 Mathematical modeling3 Mass spectrometry (LC-MS/MS)3 Time Series Analysis3 Microbiology Biochemistry Molecular biology Genetics Enzymology Synthetic biology Regulatory metabolic networks3 Escherichia coli physiology3 bacterial metabolism3 bacterial gene regulation3 microscopy3 Bacterial metabolism | Metabolic engineering3 Metabolic Pathway Analysis and Engineering Microbial Physiology Modeling of Biological Networks Industrial Systems Biotechnology White Biotechnology Strain and Process Optimization with bacteria3 Microarray experiments with prokaryotes3 genetic engineering3 Thermodynamics3 SBGN3 Computational modelling3 semantics3 Image processing3 Organic Synthesis3 in vitro & ex vivo cell culture3 Epigenetics3 Scientific Computing3 microbiomics3 SBGN standard3 Automation3 Systems Biology Graphical Notation3 Metabolic Control Analaysis3 Nutrition3 mouse studies3 Network Visualization3 Analytical chemistry3 Liver Zonation3 Toxicology3 arabidopsis thaliana3 circadian rhythms3 Neuroscience3 AI3 Biocuration3 Data mining3 Knowledge integration3 Constraint-based Modelling3 Mechanistic Modelling3 Distributed Systems3 Cheminformatics2 Virology2 Sulfolobus solfataricus2 Information Retrieval2 Statistically and biologically inspired optimization algorithms2 Gram positive bacteria (Bacillus2 Lactococcus2 sporulation2 Signal transduction in Gram-negative bacteria; Synthetic Microbiology; Single cell gene expression; Regulatory networks; biochemistry; histidine kinase/response regulator systems2 sensitivity analysis2 Phylogenetics2 pH dependent dynamic shift experiments of continuous cultures2 Mathematical modelling; Nonlinear Dynamics; Time Series Analysis; network theory2 Clostridial Genetics2 protein-RNA interactions2 Fluxomics2 localisation studies2 E. coli2 Cellular biology of metals2 HPLC2 Microbiology/ Protein chemistry/ Molecular biology2 bacterial physiology2 X-ray crystallography Structural biology2 Streptomyces2 Carbohydrate Metabolism of Archaea2 Reconstruction of metabolic pathways2 chemical engineering2 Biology2 molecular simulation2 Medical microbiology2 Streptococcus pneumoniae2 Food Microbiology2 network inference2 yeast2 enzymes2 Methode Development2 ODE modelling of biological interaction network2 c++2 High-throughput data analysis2 diabetes2 Identifiability2 Cell Cycle2 Genetic interaction2 Bioleaching2 metabolic systems biology2 High Performance Computing2 Statistics2 marine2 fungi2 Next Generation Sequencing2 Microbial Genomics2 molecular genetic systems2 RNA-Seq2 Cancer2 Stem cell2 DNA repair2 Systems Medicine2 nuclear receptors2 human energy metabolism2 signal transduction2 Innate immunity2 chronobiology2 Graphical Editors2 Data curation2 Medical informatics2 PBPK modeling2 Pharmacology2 Pharmacokinetics2 Natural Products2 Simulation2 plant metabolism2 secondary metabolites2 Metabolic modelling2 plant pathways2 alternative splicing2 enzyme technology2 transcriptional regulation2 exposure studies2 genome engineering2 Biorefinery2 Enzymatic reactions2 Provenance2 regenerative medicine2 GMP2 biochemical enzyme characterization2 outreach2 Mycoremediation2 clinical chemistry2 antibiotic resistance2 Diatoms2 Phaeodactylum tricornutum2 Visualisation2 Network biology2 Editorial Committee2 Publication platform2 Curation of molecular interactions2 Disease Maps2 Physical Chemistry2 Pathway Curation2 Data Quality2 Multicellular Modelling2 Computer Science2 Knowledge representation and reasoning2 Public Health2 Perl1 Chip-chip1 Enterococcus faecalis1 Streptomyces coelicolor1 Data analysis Mathematical modelling Bioinformatics Systems biology1 translatome1 folding pathways1 Streptococcus)1 competence1 germination1 antimicrobial peptides1 C- and N- metabolism1 pathogens1 virulence factors1 protein-lipid interactions1 physicochemical properties of membranes1 Recombineering1 Phylogentics1 Database and data warehouse design1 High-throughput sequence analysis1 Pathogenesis1 Bacterial metabolism | Metabolic engineering | Quorum sensing (bacterial cell-cell communication) | Developmental processes in prokaryotes |1 Mycoplasma pneumoniae1 Mathemical Modeling (in particular: Thermodynamic-Kinetic Modeling)1 model reduction1 reduced-order modeling1 fluorescence protein fusions (transcriptional and translational)1 Microarray Data Analysis1 Microbiology Biochemistry Molecular biology Genetics Regulatory networks Bacterial Cell Biology1 fluorescence protein fusions1 Genetics)1 computational economics. Biology: molecular biology1 tissue biology1 social insects.1 staphylococcus aureus1 stress responses Structural biology1 Salmonella1 Chemostats1 Flux analysis Bioenergetics of growth1 Modelling of genetic and signalling networks1 biomechanics1 homogenisation.1 RNA1 Microarray printing1 Database design1 Microbiology/Anaerobic Bacteria/Clostridia Molecular Physiology Stress responses1 stress adaptation of Gram-positiv bacteria1 application of functional genomics technologies in microbiology1 interaction analyses of transcriptional regulators1 analysis and preparation of diagnostic markers for Helicobacter pylori infections Yersiniosis and collagenoses1 Microbiology/ Protein chemistry/ Molecular Biology1 expression systems for pro- and eukayotes1 screening systems for nuclear transport and alternative splicing1 inducible mammalian cell death.1 Software Architecture1 biochemical1 Pseudomonas1 Prokaryotic genetics1 Regulation of carbohydrate metabolism1 Genome based Taxonomy1 Culture Collection1 Extremophiles1 reverse engineering1 protein interactions1 Molecular Interactions1 biophysical chemistry1 genetics of archaea1 cultivation of extremophiles1 REST1 Ma1 Limit cycle oscillations1 mRNA1 overflow metabolism in Bacillus1 Genetic regulation1 protein purification1 Listeria monocytogenes1 gene expression1 motif detection1 Trypanosoma brucei1 Streptococcus pneumoniae Molecular microbiology, Bacterial Cell Biology, Genetics1 in vivo1 model management1 linked data1 Carbohydrate Metabolism of Archaea carbon metabolism, Biochemistry1 enzyme classification1 Downstream Processing1 Automatization1 NK Cells1 Excemplify1 technology transfer1 quality control1 stochastic modelling1 Epigenomics1 Biomolecular Computing1 NGS analysis1 insulin signaling1 adiponectin1 Model selection1 Cellular Senescence1 Dynamic Systems1 Gastric cancer1 EGFR signalling1 apoptosis1 Phenome1 Prostate Cancer1 Bone Biomechanics1 Biomedical Engineering1 in vivo animal models1 Solanum tuberosum1 sequencing1 VREs1 Cloud computing1 Phytopathology1 de novo genome assembly1 genome annotation1 computational genomics1 gene networks1 Biofilms1 (Bio)Process Design1 evolution1 protein structure1 chemoinformatics1 drug design1 Calcium signalling1 learning1 memory1 cooperativity1 Corynebacterium glutamicum1 optimization1 chromatin1 nuclear organisation1 Human-Computer Interaction1 Hepatology1 Non-alcoholic fatty liver disease1 energy expenditure1 type 2 diabetes1 human translational research1 energy turnover1 muscle1 promoters and anhancers1 drug targets1 experiments1 lipdomics1 lipidomics1 Gut microbiota1 Akkermansia muciniphila1 Obesity1 Endocannabinoid system1 Cell specific KO1 Prebiotics1 Probiotics1 Insulin resistance1 Inflammation1 Skeletal muscle physiology and metabolism1 Integrative Human Phsyoiology and Metabolism1 Confocal Immunofluoresence Microscopy visualising Muscle Metabolism1 Endothelial arteriolar and capillary metabolism1 Substrate fluxes across organs measured with stable Isotope Tracers1 Generating in vivo human data to feed metabolic models1 Interface between physiologists and modellers1 neuroanatomy1 endocrinology1 pathology of type 2 diabetes and cardiovascualr disease1 metabolic homeostasis1 Molecular neurobiologist1 single cell transcriptomics1 viral vectors1 neurobiology of energy balance1 Computational Statistics1 nitrogen metabolism1 Actinobacteria1 antibiotic production1 Hedgehog Pathway1 Wnt Pathways1 morhogenic signalling1 plant1 Astronomy1 MAP-kinase1 Bioreactor cultivation1 Liver injury and regeneration1 Metabolim1 pathogen host interaction1 sediment ecology1 Flowcytometery1 Cyanobacteria1 Dinoflagellates1 terpenes1 aromatic compounds1 protein expression1 Agile development1 Docker1 caenorhabditis elegans1 splicing1 plant architecture1 leaf development1 NeuroML1 Chemistry1 computational chemistry1 Compucell3D1 gene clusters1 Biochemical analysis1 protein extraction1 ELISA1 Immunoblots1 Immunoassays1 oral food challenge1 food allergy1 peanut and treenut allergy1 recombinant protein production1 Epidemiology1 Structural biology by NMR1 Carbohydrate modifying proteins1 protein NMR1 lytic polysaccharide monooxygenases1 Metabolic Signaling1 immune signaling1 ex vivo1 genome mining1 Alga1 Organic residues1 Protein and Enzyme structure and mechanism1 Thermophilic proteins in industrial biocatalysis1 plant growth1 Environmental toxicology1 Mathematical Economics1 Game Theory1 Ligninolytic enzymes1 Biorremediation1 Ligninolytic fungi1 bio-mineralization1 geochemistry1 process engineering1 process design1 reaction engineering1 Semantic Enrichment1 Health Informatics1 reprogramming1 electrophysiology1 GLP1 Catalysed chemical modification of monomeric1 oligomeric & polymer compounds1 reaction monitoring1 analytical characterisation by 1HNMR1 13C-NMR1 2D-NMR(HSQC)1 31P-NMR1 SEC1 EA (CHONS)1 FT-IR etc.1 Depolymerisation techniques in high pressure plug flow reactors and batch reactors1 biological wastewater treatment1 Sulfolobus acidocaldarius1 expression systems1 cloning and expression analysis1 Archaeal physiology1 Hyperthermophiles1 Thermoacidohiles1 NanoLUC1 LUC1 Pathways1 industrial biotechnology1 plant molecular physiological ecology1 phylogenomics1 scientific workflows1 neglected tropical diseases1 medical diagnostics1 healthcare1 biomarkers1 Enzyme Discovery1 HT-Cloning1 Enzyme Production1 Assay Development1 Micobiology1 sepsis1 protease inhibitors1 Gene editiing1 CRISPR/Cas91 fatty acid1 COVID-191 Biological knowledge managament1 ODE modeling1 Human physiology1 Immersive Analytics1 Literature mining1 Molecular Maps1 Complex human disease1 Boolean Models1 Executable disease networks1 Medicine1 Drug Curation1 Dissemination1 Funding1 Integration1 General support1 Simulation of protein-protein interactions1 Knowledge modelling1 Quantitative Biology1 Validation1 Analysis1 Data Modelling1 Reaction Networks1 Rule-based Models1 Tracer Kinetics1 Collective Behaviour1 pest management1 semiochemicals1 pheromones1 chemical ecology1 plant protection1 Cohort Studies1 materials science1 interoperability1 ETL1 DataScience1 Clinical Information System1 scholarly communications1 discourse analysis1 Cancer Biology1 multi-omics1 Dynamic qualitative modelling1 SARS-CoV 21 Democracy Theory1 Science and Technology Studies1 Practice Theory1 Actor-Network Theory1 rare diseases1 GCP1 Genome-scale Metabolic Models1 Computer-aided drug design1 drought1 plant ecophysiology1 quantitative genetics1 models1 phenotyping1 Table Curation1 N-terminomics1 TAILS1 degradomics1 proteases1 protease substrate discovery1 MALT1 paracaspase in NFkB activtaion1 Interferon inactivation by proteases1 viral proteases1 catalysis1 Physiological-based pharmacokinetics model1 Bayesian statistics1 Uncertainty quantification1 structural biology1 parassite research1 drug development1 drug resistance1 antibacterial drugs1 neurodegenerative diseases1 metalloproteins1 protein production1 Plant sciences1 Biological Simulation1 Virtual Tissues1 Model Sharing1 Language Standards1 Developmental Biology1 Framework Development1 Community Building1 More...

Matlab61 Molecular Biology57 R56 Python52 Transcriptomics51 Molecular biology techniques (RNA/DNA/Protein)50 Biochemistry and protein analysis48 Microbiology39 Bioinformatics36 ODE35 Computational Systems Biology34 Data Management33 SBML33 Genetic modification29 Fermentation28 Dynamic modelling28 Computational and theoretical biology27 Databases24 Microarray analysis24 Biochemistry23 Proteomics23 Java23 Genetics20 Systems Biology19 Metabolomics17 Copasi16 Genomics15 Mathematica15 Parameter estimation15 Fluorescence and confocal microscopy14 linux13 Data Integration13 Cytoscape12 Stochastic models12 Metabolic Engineering12 Chromatography11 Proteomics (2D-PAGE)11 qRT-PCR11 CellDesigner11 Cell and tissue culture9 qPCR9 Fluorecence based reporter gene analyses/single cell analyses9 Mass spectrometry (LC-MS/MS)9 COBRA toolbox9 Perl8 MySQL8 Deterministic models8 Cell culture8 Cell biology7 Genetic analysis7 differential algebraic equations7 continuous cultivation7 Enzyme assay7 molecular biological techniques (RNA/DNA techniques7 Flow cytometry7 network theory7 microbiology techniques7 Machine Learning7 Cytometry and fluorescent microscopy6 Model organisms6 Partial differential equations6 Web services6 Mass spectrometry6 SQL6 fluorescence spectroscopy6 quantitative western blot analysis6 HPLC6 Neo4J6 Kinetic Modeling6 Spectroscopy and structural analysis5 Workflows5 PCR5 Ruby on Rails5 stimulus response experiments5 data modeling5 quantitative western blot analyses5 Molecular biology techniques (RNA/DNA)5 Flux balance analysis5 HTML5 semantic web5 Javascript5 SBGN5 c++5 bash5 SBGN-ED5 pathvisio5 Single Cell analysis4 Cell designer4 Ontologies4 PHP4 Material balance based modeling4 Protein chemical methods (protein overproduction4 enzymatic analyses4 C programming4 time lapse microscopy4 2-D Gel Electrphoresis4 Bioconductor Packages in R4 GC and LC analysis of metabolites4 Western blot analyses4 stochastic methods4 enzyme kinetics4 NMR4 RNAseq4 SED-ML4 Statistics4 Data Science4 Jupyter4 cobrapy toolbox4 wikipathways4 SEEK4 Isolation purification and separation3 Pharmacology and toxicology3 JWS Online3 Chip-chip3 Taverna3 evaluation of process dynamics3 mutant strain generation3 XPPAUT3 FACS3 Membrane protein biochemistry3 Site-directed mutagenesis3 Data analysis3 DNA technology RNA technology Protein analysis Fermentation Mutagenesis3 Fluorescence microscopy3 molecular biological techniques (RNA/DNA techniques)3 In silico Metabolic Network Analysis3 Chemostat culture3 RNA / DNA Techniques3 Mutant and Strain Construction3 Enzyme assays3 reporter gene analyses3 DNA3 Proteins3 Gaschromatographic analysis3 analysis of functional genomics data3 interaction analysis techniques especially SPR measurements3 Statistical tools3 Pathway Tools3 model prediction testing3 Molecular Dynamics3 transcription analysis3 RNA interference3 protein purification3 metabolic network visualization3 FBA3 High Performance Computing3 libSBML3 Compucell3D3 Latex3 Shell scripting3 Knowledge Management3 Modeling3 Algebraic equations2 Linear equations2 rtPCR2 qtPCR2 Ruby2 MIRIAM2 DIVA2 quantitative Western analyses)2 Northern analyses)2 cultivation2 northern blot analysis2 including: - Dynamic modelling - Parameter estimation - Optimal experimental design - Dynamic optimization2 including:- Dynamic modelling- Parameter estimation- Optimal experimental design- Dynamic optimization2 Biochemistry of substrate transport. molecular biological techniques (RNA/DNA techniques analyses of transport across cell membranes heterologous expression of transporters2 Chemical cross-linking2 PDE2 transcriptional analysis (Northern blots2 Optimal experimental design2 Proteomics (Glycoproteins)2 BioMart2 Comparative Genomics2 GC and LC analysis of metabolites | Analysis of signal molecules | Handling of anaerobic bacteria |2 isothermal titration calorimetry2 SubtiWiki2 time-resolved microarray analysis2 protein-DNA interactions; gel shifts; footprints; in vitro transcription protein ligan interactions2 metabolic labeling2 absolute quantification2 Immunofluorescence2 protein interaction studies2 fed-batch cultivation2 bacterial chemostat culture2 Bioreactor experiments/Fermentation (batch2 spectroscopy2 site-directed and random mutagenesis2 Mutant and Strain Construction; RNA / DNA Techniques; RT-RealTime-PCR; 2D-Gels; Metabolite Analysis; Bioreactor Experiments; Flow Cyometry; Microscopy; Single Cell analysis2 Chemostats2 Multiscale and multiphysics modelling2 molecular biology techniques2 gel-based and gel-free proteomics2 shotgun proteomics2 in vivo crosslinking2 PIPSA2 SYCAMORE2 fortran2 CUDA2 Perl programming2 phage techniques2 PySCeS2 GC and LC/MS analysis of metabolites2 Reactome2 standards2 Model selection2 Identifiability analysis2 web development2 ChIP-seq2 tellurium2 SABIO-RK2 Boolean modeling2 Animal models2 mouse models2 immunohistochemistry2 Petri Nets2 libRoadrunner2 cloning2 Docker2 photobiology2 jupyter notebooks2 AMICI2 Stata2 unix2 GINsim2 Cell Collective2 Newt Editor2 DisGeNET2 ODE Modelling2 Spectrophotometry2 Antimony2 Immunological techniques1 Agent-based modelling1 Spring1 semanticSBML1 ProMOT1 J2EE1 pulsed - FRAP1 purification1 molecular biological techniques (RNA/DNA techniques analyses of transport across cell membranes heterologous expression of transporters1 Biochemistry of substrate transport. molecular biological techniques (RNA/DNA techniquesanalyses of transport across cell membranesheterologous expression of transporters1 FRAP1 Fluorescence and confocal microscopy FRAP/FLIP1 genomic array footprinting1 gene regulation1 The Membrane Enzymology group focuses on the molecular mechanisms of transport and signalling across biological membranes. In other words: How do molecules permeate biological membranes and how at the level of protein molecules are environmental signals s1 engineering principles and approaches from molecular biology and synthetic chemistry are applied. Confocal microscopy and various spectroscopic methods are used to analyze processes at the single cell or even single molecule level.1 C programing1 quantitative RT-PCR); quantitative Western blot analysis; protein purification; reconstitution of membrane-integrated proteins; Biochemistry of substrate transport; Fluorecence based reporter gene analyses/single cell analyses1 surface plasmon resonance spectroscopy; site-directed spin labeling and EPR analysis;1 Dynamic optimization1 sensitivity analysis1 Time-lapse fluorescence microscopy Flow cytometry1 EnsEMBL1 XML1 Phylogenetics1 methods of nonlinear time series analysis1 programming in C1 site-directed spin labeling and EPR spectroscopy1 Biophysics1 SPINE1 bacterial two-hybrid system1 bacterial chamostat culture1 GeLC-MS/MS1 AQUA1 Logical modelling1 trac (wiki for data management)1 model reduction1 Fluxomics1 transposon mutagenesis1 Time-lapse fluorescence microscopy1 FLAME - Flexible Large-scale Agent-based Modelling Framework.1 GFP expression1 live cell array1 X-ray crystallography electron microscopy Biochemistry and protein analysis1 Chemostat)1 2D-PAGE1 plasmon resonance spectroscopy1 phage transduction1 Molecular biology techniques (DNA/Protein)1 Chemostat culture GC and LC analysis of metabolites1 asymptotic methods1 model reduction.1 RNA1 Gaschromatography1 Creation of Mutants1 stress experiments1 Groovy1 Protein1 Mutant construction1 2-D Gel Electrophoresis1 Chemostat cultures Molecular biology techniques (RNA/DNA) 2-D Gel electrophoresis Gaschromatography Protein overexpression/purification1 molecular biological1 microbiological and immunological techniques1 surface plasmon resonance spectroscopy1 reporter gene analysis1 X-ray crystallographyelectron microscopyBiochemistry and protein analysis1 Maple1 Clustering softwares1 affinity copurification/precipitation1 reverse engineering1 computational platform development1 metabolic netwlrk visualization1 gPROMS1 SABIO-RK http://sabio.villa-bosch.de/1 molecular modeling and simulation1 Protein and RNA structure prediction1 Homology Modelling1 Programming in perl and tcl1 Grails web development framework1 iTRAQ for quantitative proteomics1 madonna1 genetics of hyperthermophilic archaea1 phylogeny1 metagenomics1 GPU1 Thermodynamics1 SABIO-RK database1 in vitro transcription1 DNA affinity chromatography1 EMSA1 RightField1 Bayesian inference1 immunoblot1 Physiology1 graphdatabase1 Enzyme assays Molecular Biology, Biochemistry1 Protege1 Protein Arrays1 Excemplify1 standard bioinformatic tools1 Surface sensitive techniques1 octave1 Scilab1 Individual-based models1 protein analysis1 life-cell imaging1 CalMorph1 GLM1 Activity-based Protein Profiling1 pulse SILAC1 Microbial Ecology1 micro-Computed Tomography1 omics1 imaging1 Bioreactor experiments1 AWS1 Research Objects1 energy metabolism1 Maxquant1 SILAC1 high-throughput sequencing1 Vaadin1 Numerical modells1 Comsol1 R package1 analytics1 multi-state modelling1 MCell1 roadrunner1 13C-MFA1 High-throughput phenotyping1 Integrative modeling1 Liquid handling systems1 Automation1 quantitative microscopy1 yEd Graph Editor1 antiSMASH1 CloneManager1 artemis1 indirect calorimetry1 human metabolic research1 geneXplain platform1 BioUML1 stable isotopes1 lipidomics1 Integrative physiology1 Glucose metabolism1 Lipid metabolism1 LPS measurments1 Gut microbiota analysis1 Isotope Ratio Mass Spectrometry1 Confocal Immunofluorescence microscopy1 In vivo measurement of susbstrate fluxes in humans1 Visualisation of muscle and microvascular metabolism in muscle sections1 hyperinsulinemic clamp in rats1 stereotactic surgery1 Morpheus1 GWAS1 WES/WGS1 patient interventions1 gene transfer tools1 metabolic phenotyping1 SBGNViz1 cBioPortal1 PathwayMapper1 ChiBE1 RNATrap1 cre mice and rats1 feeding behaviors1 Fluorescence and confocal microscopyFRAP/FLIP1 MS imaging1 FT-ICR-MS1 Field Flow Fractionation1 IHC1 ISH1 ChiP1 Snoopy1 Marcie1 Charlie1 CSS1 editors1 Intravital immaging1 CBMPy1 F-A-M-E1 Supervised Leadning1 Berkeley Madonna1 gpgpu computing1 evolutionary computation1 swarm intelligence1 Plant biology1 Metabolic modelling1 DNA/RNA isolation1 RACE pcr1 GoldenGate1 C. elegans biology1 NeuroML1 pbpk1 1D and 2D SDSPAGE1 ELISA Techniques1 oral food challenge matrix preparation for food allergy research1 data analysis and data management1 food allergen characterisation1 recombinant protein production1 Data2Dynamics1 PESTO1 HMMER1 genome engineering1 plant transformation1 Bifurcation analysis1 Gromacs1 Solid-state fermentation1 Galaxy1 lattice boltzmann1 REX1 AspenPlus1 JMP1 ICAS1 electrophysiology1 super resolution microscopy1 iPSC culture1 Photoactivated localization microscopy1 Bioreactors operation1 Gas exchange measurements1 screening assays1 enzymatic synthesis1 enzyme engineering1 biomarkers1 biomarkers1 In silico Mining1 CRISPR/Cas91 CRISPR/Cas91 experimental tools1 NetworkX1 Protein2GO1 BioNetGen1 ProcessDB1 VANTED1 MetaCrop1 TEAMwISE1 NaviCell1 Literature mining1 Literature mining1 CaSQ1 SBGNML1 JSBML1 SBSCL1 InSilico1 Text Mining1 Data Modelling1 constraint programming1 model checking1 Prolog1 yEd1 bridgedb1 sparql1 Jena1 Pentaho1 C#1 NMR spectroscopy1 OmniPath1 pypath1 In vivo bioluminescence imaging1 Adobe Illustrator1 GraphPad Prism1 Adobe Photoshop1 SBGN-ML1 sbgntikz1 pint1 clingo1 omics analysis1 Qualitative Methods1 Participatory Reseach1 Julia1 AlternatingConditionalExpectation1 PEtab1 Constraint-based analysis1 Ordinary differential equations1 Multiscale modeling1 dynamic light scattering1 COBRApy1 pycharm1 rstudio1 slurm1 Molecular docking and simulation1 sensors1 high throughput phenotyping1 MaBoSS1 TAILS1 PICS1 ATOMS1 Protease assays1 MALDI-TOF/TOF1 LC-MS/MS1 Animal modes1 X-ray crystallography1 recombinant technology1 MIAPPE1 Model-data integration1 Tissue Forge1 CC3DML1 More...