U2020.3
Version 2

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Model derived from U2020.2, fitted to the TiMet RNA data for wild-type and clock mutants. Fixed parameters are scaling factors, COP1 and cP parameters. The rest of the parameters were left optimisable. The networks used in the fitting include WT, lhycca1, prr79, toc1, gi and ztl. The ztl network was only used for fixing the period in this mutant. Then final parameter values for transcription rates were obtained by taking the product of scaling factor and either transcription or translation, the latter required for painting the dynamic in the system.

SEEK ID: https://fairdomhub.org/models/731?version=2

1 item is associated with this Model:
  • U2020.3.xml (XML document - 79.1 KB) Download

Organism: Arabidopsis thaliana

Model type: Ordinary differential equations (ODE)

Model format: SBML

Execution or visualisation environment: Copasi

Model image: No image specified

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Views: 457   Downloads: 24

Created: 7th May 2020 at 18:50

Last updated: 31st Aug 2021 at 00:02

Last used: 24th Jun 2022 at 06:15

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Version 2 (latest) Created 1st Nov 2020 at 19:31 by Uriel Urquiza Garcia

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