ZucAt: FBA solution of the model under dark growth conditions
Version 3

The solution of Flux Balance Analysis (FBA) represent metabolic flux distribution in the model under dark growth conditions (i.e. constraints)

SEEK ID: https://fairdomhub.org/data_files/1297?version=3

Filename: 2016-05-30 FBA dark v4.0.txt  Download

Format: Plain text document

Size: 14.2 KB

**** HEADER ****
Method:	FBA
Mode:	Precise
Model:	sugar transport Arabidopsis thaliana
Version:	 3.7.0
Date:	6/4/2016 - 18:13
Comment:	
Objective: 1.0*T.Biomass.ext 	5000.0
Constraints:
1.0*PGM3_plastid = 0.0
1.0*RPC_plastide = 0.0
1.0*RPC2_plastide = 0.0
1.0*GLYK = 0.0
1.0*T.Biomass.ext <= 5000.0
1.0*T.starch.ext >= 0.0
1.0*T.hv.ext = 0.0
Equation: 8480000.0*O2 + 3840000.0*h + 13420.0*Starch + 5040000.0*Nitrate + 1002000.0*Orthophosphate + 19940.0*Sulfate = 1.55E7*CO2 + 1.0*Biomass_plant + 1.92E7*H2O
**** EOF HEADER ****

**** Flux ****
ACL	3.323800642303585E8
ACL_root	5.492083576964151E7
ACOL	1.7217556268579718E8
ACOL_root	2.8449437314202804E7
ADG_plastid	0.0
ADK	5.031602861192917E9
ADK_plastid	4.590794279945749E8
ADP_root	8.449571509848806E8
AGT	0.0
AICAR	2.789415754700131E9
AICAR_root	4.60909245299869E8
ALA	3.894064128033918E8
ALA_root	6.434358719660821E7
AL_plastid	1.4495370154360756E10
AMP	1.4247425901480527E9
AMP_root	2.3541740985194728E8
APS	8.20649878222024E7
APS_reductase	8.20649878222024E7
ARG	9.01105748635948E7
ARG_root	1.4889425136405205E7
ASN	3.02514072756354E8
ASN_root	4.998592724364605E7
ASP	6.763686876322159E9
ASP_root	1.117598123677841E9
ATP/ADPtranslocator.mitochondrion	-1.4283996246571802E11
ATP/ADPtranslocator.mitochondrion.root	-4.235809512500988E10
ATP/ADPtranslocator.plastid	-3.0818836464846535E10
ATP_synthase	0.0
Aldo	1.6132174474832806E10
Aldo_plastid	0.0
Aldo_root	1.5257777173363366E9
Ash	1287293.9266227828
Ash_root	212706.07337721722
BAM	3.770144401723725E8
Biomass_mesophyll	429097.9755409276
Biomass_plant	5000.0
Biomass_root	70902.0244590724
CAT	0.0
CIS_mitochondria	8.391283921772392E9
CIS_mitochondria_root	3.300648961130871E9
CMP	3.862267968046335E8
CMP_root	6.381820319536648E7
CPS	1.5921036735482807E9
CPS_root	2.6307132645171928E8
CTP	3.862267968046335E8
CTP_root	6.381820319536648E7
CYS	8.20649878222024E7
CYS_root	1.3560012177797597E7
Chor	2.2366731975070852E8
Chor_root	3.6957680249291494E7
ENO	1.320001329446935E10
ENO_root	4.095219588433912E9
ET	0.0
FBP	0.0
FBP_plastid	0.0
FF_root	3.20835204813344E9
FK_root	3.20835204813344E9
FNR	-8.689015593834233E10
FQR	0.0
FUM	1.147815820270065E10
FUM_root	3.810708780202614E9
Formyl	-5.630323266465174E9
Formyl_root	-9.303267335348268E8
G6PDH	8.434978006668664E8
G6PDH_plastid	4.348611046308227E10
G6PDH_root	5.535227558110331E9
GAPDH	1.646572780201991E10
GAPDH_plastid	0.0
GAPDH_root	4.634830080883351E9
GAT	0.0
GDC	0.0
GDH	9.69823429379962E9
GDH_root	0.0
GHMT	2.8891810340133967E9
GHMT_root	4.773939659866034E8
GLK	3.770144401723725E10
GLK_root	3.20835204813344E9
GLO	0.0
GLU_plastid	2.1784087725452236E10
GLYK	0.0
GMP	1.4161649216169896E9
GMP_root	2.3400007838301042E8
GOGAT_root	1.9970065683473847E9
GPDH	3763017.606303719
GPDH_root	621782.3936962814
GS_plastid	2.9900677608857384E10
GS_root	3.338151684942235E9
Glyc	3763017.606303719
Glyc_root	621782.3936962814
H-ATPase2_root	1.1144194101820936E10
H-ATPase_mesophyll	1.3119616609976112E10
H-ATPase_phloem1	1.6513825995492153E10
H-ATPase_phloem2	1.3119616609976112E10
H-ATPase_root	1.6155356931716328E10
HPR	0.0
Hexa	7822627.733301327
Hexa_root	1292572.2666986736
His	5.149175706491131E7
His_root	8508242.935088689
HomoSer	3.523967124129868E8
HomoSer_root	5.8228287587013215E7
IDH	0.0
IDH_mitochondria	8.058903857542033E9
IDH_mitochondria_root	3.2457281253612294E9
ILE	1.0941998376293653E8
ILE_root	1.8080016237063464E7
IMP	2.8409075117650423E9
IMP_root	4.694174882349577E8
Leu	2.1883996752587306E8
Leu_root	3.616003247412693E7
Lino	6951.387203763027
Lino_root	1148.612796236973
Lipidpoly	3861881.7798683485
Lipidpoly_root	638118.2201316516
Lys	4.827352224835435E7
Lys_root	7976477.751645645
MDH	-1.641637775877052E10
MDH_mitochondria	2.789453596147117E10
MDH_mitochondria_root	4.837889729787592E9
MDH_root	-1.027180949584978E9
MET	2.4136761124177177E7
MET_root	3988238.8758228226
MH	1.8850722008618626E10
MS3	2.8650442728892193E9
MS3_root	4.7340572711078054E8
MTHFR	2.8891810340133967E9
MTHFR_root	4.773939659866034E8
NADP_MDH	0.0
NIA	2.1660990243718933E10
NIA_root	3.5791547562810683E9
NiR	2.1660990243718933E10
NiR_root	3.5791547562810683E9
Octa	2685552.5897204494
Octa_root	443747.41027955053
Orni	9.01105748635948E7
Orni_root	1.4889425136405205E7
OxPhos1.mitochondrion_mesophyll	5.151861302377447E10
OxPhos1.mitochondrion_root	1.4483759516194084E10
OxPhos1_phloem	7.169381275516516E9
OxPhos2.mitochondrion_mesophyll	7.173889282988871E9
OxPhos2.mitochondrion_root	3.0994926999143925E9
OxPhos2_phloem	1.4338762551033032E9
OxPhos3.mitochondrion_mesophyll	5.8692502306763336E10
OxPhos3.mitochondrion_root	1.758325221610848E10
OxPhos3_phloem	8.60325753061982E9
OxPhos4.mitochondrion_mesophyll	2.9346251153381668E10
OxPhos4.mitochondrion_root	8.79162610805424E9
OxPhos4_phloem	4.30162876530991E9
OxPhos5.mitochondrion_mesophyll	1.3566607318272916E11
OxPhos5.mitochonrion_root	-3.925860242509548E10
OxPhos5_phloem	2.6765690095261658E10
PDC_TCA	1.4338762551033032E9
PDH	8.391283921772392E9
PDH_root	3.300648961130871E9
PFK	1.6132174474832806E10
PFK_root	1.5257777173363366E9
PGDH	8.434978006668664E8
PGDH_plastid	4.348611046308227E10
PGDH_root	5.535227558110331E9
PGI	2.2128577740597E10
PGI_plastid	4.348611046308227E10
PGI_root	-4.879348390503497E9
PGK	1.646572780201991E10
PGK_plastid	0.0
PGK_root	4.634830080883351E9
PGL	8.434978006668664E8
PGL_plastid	4.348611046308227E10
PGL_root	5.535227558110331E9
PGM	1.320001329446935E10
PGM3	-1.4729368475973383E10
PGM3_plastid	0.0
PGM3_root	-2.5524728805266066E9
PGM_root	4.095219588433912E9
PGP	0.0
PK	9.40824612380439E9
PK_root	3.468686759098872E9
PMet	2.1883996752587306E8
PMet_root	3.616003247412693E7
PPC	3.3444325311635437E9
PPC_root	5.526174688364562E8
PRK_plastid	0.0
PRO	3.218234816556957E7
PRO_root	5317651.83443043
PSI	0.0
PSII	0.0
Phe	1.0298351412982263E8
Phe_root	1.7016485870177377E7
Proteinpoly	1.072744938852319E7
Proteinpoly_root	1772550.6114768102
R5PI	3.2670799545217953E9
R5PI_plastid	-1.4495370154360756E10
R5PI_root	2.3384534984039373E9
RDPK	4.367037371573905E9
RDPK_root	7.215876284260947E8
RNApoly	429097.9755409276
RNApoly_root	70902.0244590724
RPC2_plastide	0.0
RPC_plastide	0.0
RPE	-2.423582153854929E9
RPE_plastid	-2.899074030872151E10
RPE_root	3.1967740597063937E9
SBP_plastid	1.4495370154360756E10
SCL	7.173889282988871E9
SCL_root	3.0994926999143925E9
SER	3.2657145075505605E9
SER_root	5.396104924494394E8
SK	6.283574002872875E7
SPP	3.572821111909266E9
SPS	3.572821111909266E9
SUL_root	1.3560012177797597E7
Suc-CoA	7.173889282988871E9
Suc-CoA_root	3.0994926999143925E9
Sulfite_reductase	8.20649878222024E7
T.ADP.mesophyll (mitochondria <=> mesophyll)	1.4283996246571802E11
T.ADP.plastid	3.0818836464846535E10
T.ADP.root (mitochondria <=> root)	4.235809512500988E10
T.ATP.mesophyll (mitochondria <=> mesophyll)	-1.4283996246571802E11
T.ATP.plastid	-3.0818836464846535E10
T.ATP.root (mitochondria <=> root)	-4.235809512500988E10
T.Biomass.ext	5000.0
T.Biomass.mesophyll	429097.9755409276
T.Biomass.root	70902.0244590724
T.CO2.ext	7.787769096517555E10
T.CO2.mesophyll	5.975043012057135E10
T.CO2.mesophyll (mitochondria <=> mesophyll)	-2.3624077062303295E10
T.CO2.mesophyll(plastid<=>mesophyll)	4.348611046308227E10
T.CO2.mitochondria (mitochondria <=> mesophyll)	-2.3624077062303295E10
T.CO2.mitochondria (mitochondria <=> root)	-9.645869786406492E9
T.CO2.phloem	4.30162876530991E9
T.CO2.plastid(plastid<=>mesophyll)	4.348611046308227E10
T.CO2.root	1.3825632079294298E10
T.CO2.root (mitochondria <=> root)	-9.645869786406492E9
T.Fumarate.mesophyll (mitochondria <=> mesophyll)	4.304268919711779E9
T.Fumarate.mitochondria (mitochondria <=> mesophyll)	4.304268919711779E9
T.Fumarate.mitochondria (mitochondria <=> root)	7.112160802882215E8
T.Fumarate.root (mitochondria <=> root)	7.112160802882215E8
T.GAP.plastid	-1.4495370154360756E10
T.GAP.plastid2	-1.4495370154360756E10
T.Glu.plastid1	1.3667497842047087E10
T.Glu.plastid2	1.3667497842047087E10
T.Glutamine.plastid1	8.116589883405149E9
T.Glutamine.plastid2	-8.116589883405149E9
T.Glyceraate.mesophyll	0.0
T.Glycerate.plastid	0.0
T.Glycolate.mesophyll	0.0
T.Glycolate.plastid	0.0
T.H2O.ext	0.0
T.H2O.ext2	9.607083635460709E10
T.H2O.mesophyll (mitochondria <=> mesophyll)	-1.7448913336501944E11
T.H2O.mesophyll(plastid<=>mesophyll)	-3.334609216297938E10
T.H2O.mesophyll.load	2.2969766232471626E10
T.H2O.mesophyll.unload	9.607083635460709E10
T.H2O.mitochondria (mitochondria <=> mesophyll)	-1.7448913336501944E11
T.H2O.mitochondria (mitochondria <=> root)	-4.9730496899870476E10
T.H2O.phloem.load	1.9026606530937542E10
T.H2O.phloem.unload	2.2969766232471626E10
T.H2O.plastid(plastid<=>mesophyll)	-3.334609216297938E10
T.H2O.root (mitochondria <=>root)	-4.9730496899870476E10
T.H2O.root.load	0.0
T.H2O.root.unload	1.9026606530937542E10
T.H2S.plastid1	8.20649878222024E7
T.H2S.plastid2	8.20649878222024E7
T.Isocitrate.mesophyll (mitochondria <=> mesophyll)	-3.323800642303585E8
T.Isocitrate.mitochondria (mitochondria <=> mesophyll)	-3.323800642303585E8
T.Isocitrate.mitochondria (mitochondria <=> root)	-5.492083576964151E7
T.Isocitrate.root (mitochondria <=> root)	-5.492083576964151E7
T.KG.plastid1	-2.1784087725452236E10
T.KG.plastid2	2.1784087725452236E10
T.Malate.mesophyll(plastid<=>mesophyll)	0.0
T.Malate.mit	1.641637775877052E10
T.Malate.mit2	1.641637775877052E10
T.Malate.mitochondria(mitochondria<=>root)	1.027180949584978E9
T.Malate.plastid	0.0
T.Malate.root(mitochondria<=>root)	1.027180949584978E9
T.N.ext	-2.5256104794067173E10
T.N.mesophyll.load	2.167468687436748E10
T.N.phloem.load	2.167468687436748E10
T.N.phloem.unload	2.167468687436748E10
T.N.root.load	2.5256104794067173E10
T.N.root.unload	2.167468687436748E10
T.NH4.mesophyll	-8.2396873651384535E9
T.NH4.plastid	-8.2396873651384535E9
T.NO2.plastid1	2.1660990243718933E10
T.NO2.plastid2	2.1660990243718933E10
T.O2.ext	-4.244465087674581E10
T.O2.mesophyll	-2.935066644282059E10
T.O2.mesophyll (mitochondria <=> mesophyll)	2.9346251153381668E10
T.O2.mesophyll (palstid <=> mesophyll)	0.0
T.O2.mitochondria (mitochondria <=> mesophyll)	2.9346251153381668E10
T.O2.mitochondria (mitochondria <=> root)	8.79162610805424E9
T.O2.phloem	-4.30162876530991E9
T.O2.plastid (palstid <=> mesophyll)	0.0
T.O2.root	-8.792355668615314E9
T.O2.root (mitochondria <=> root)	8.79162610805424E9
T.OAA.mesophyll (mitochondrion <=> mesophyll)	1.9503252039698776E10
T.OAA.mesophyll (palstid <=> mesophyll)	0.0
T.OAA.mitochondrion	-1.9503252039698776E10
T.OAA.mitochondrion (mitochondrion <=> root)	1.537240768656721E9
T.OAA.plastid	0.0
T.OAA.root (mitochondrion <=> root)	1.537240768656721E9
T.Orthophosphate.mesophyll (mesophyll<=>mitochondria)	1.4283996246571802E11
T.Orthophosphate.root (root<=>mitochondria)	4.235809512500988E10
T.Oxoglutarate.mesophyll(mitochondria<=>mesophyll)	-8.850145745531632E8
T.Oxoglutarate.mitochondria(mitochondria<=>mesophyll)	-8.850145745531632E8
T.Oxoglutarate.mitochondria(mitochondria<=>root)	-1.4623542544683683E8
T.Oxoglutarate.root(mitochondria<=>root)	-1.4623542544683683E8
T.P.ext	-5.016915788183378E9
T.P.mesophyll.load	4.305496816337609E9
T.P.mit_mesophyll	1.4283996246571802E11
T.P.mitochondria_root2	4.235809512500988E10
T.P.phloem.load	4.305496816337609E9
T.P.phloem.unload	4.305496816337609E9
T.P.plastid	-4.531420661920729E10
T.P.plastid2	0.0
T.P.root.load	5.016915788183378E9
T.P.root.unload	4.305496816337609E9
T.Pyruvate.mesophyll (mesophyll<=>mitochondria)	8.391283921772392E9
T.Pyruvate.mit_mesophyll2	8.391283921772392E9
T.Pyruvate.mitochondria_root	3.300648961130871E9
T.Pyruvate.root (root<=>mitochondria)	3.300648961130871E9
T.S.ext	-9.972894704584457E7
T.S.mesophyll.load	8.558697856040056E7
T.S.phloem.load	8.558697856040056E7
T.S.phloem.unload	8.558697856040056E7
T.S.root.load	9.972894704584457E7
T.S.root.unload	8.558697856040056E7
T.Starch.Plastid (Plastid <=> Plant)	-6.712671978413802E7
T.Starch.plant(plant<=>mesophyll)	4290979.755409276
T.Starch.plastid(plastid<=>mesophyll)	4290979.755409276
T.Sucrose.mesophyll	3.567671936202775E9
T.Sucrose.phloem.load	3.567671936202775E9
T.Sucrose.phloem.unload	3.209202872426949E9
T.Sucrose.root	-3.209202872426949E9
T.Sulfate.plastid	8.20649878222024E7
T.Sulfate.plastid2	-8.20649878222024E7
T.alpha-Maltose.mesophyll(plastid<=>mesophyll)	1.8850722008618626E10
T.alpha-Maltose.plastid(plastid<=>mesophyll)	1.8850722008618626E10
T.h.ext	1.1144194101820936E10
T.h.mit_mesphyll1	1.5089886632326004E11
T.h.mit_mesphyll2	1.5089886632326004E11
T.h.mitochondria_root1	4.560382325037111E10
T.h.mitochondria_root2	4.560382325037111E10
T.h.plastid_mesophyll1	0.0
T.h.plastid_mesophyll2	0.0
T.hv.ext	0.0
T.starch.ext	-6.712671978413802E7
TA	-1.0999574170521102E9
TA_plastid	2.899074030872151E10
TA_root	1.6168658699778426E9
TKa	-1.0999574170521102E9
TKa_plastid	-1.4495370154360756E10
TKa_root	1.6168658699778426E9
TKb	-1.3236247368028185E9
TKb_plastid	-1.4495370154360756E10
TKb_root	1.5799081897285511E9
TPI	-1.6128411457226503E10
TPI_plastid	1.4495370154360756E10
TPI_root	-1.5251559349426403E9
TRP	2.4136761124177177E7
TRP_root	3988238.8758228226
Thr	3.282599512888096E8
Thr_root	5.424004871119039E7
Tyr	9.65470444967087E7
Tyr_root	1.595295550329129E7
UDP	3.862267968046335E8
UDP_root	6.381820319536648E7
UGD	2.5745878532455654E9
UGD_root	4.254121467544344E8
UGP	-1.4729368475973383E10
UGP_root	-2.5524728805266066E9
UMP	1.501993098684686E9
UMP_root	2.4818190131531408E8
UTP	1.5115595272778017E10
UTP_root	2.616291083721973E9
VAL	6.436469633113914E7
VAL_root	1.063530366886086E7
cellulose_mesophyll	8581959.510818552
cellulose_root	2127060.733772172
cis-Hexa	4020218.932842951
cis-Hexa_root	664281.0671570493
cis-Octa	2398228.5852982444
cis-Octa_root	396271.4147017557
pH_mesophyll	1.3119616609976112E10
pH_mit_root	-3.925860242509548E10
pH_phloem	2.9633442605468266E10
pH_root	2.7299551033537262E10
pectin_mesophyll	8581959.510818552
pectin_root	1418040.489181448
starch synthase	0.0
suc_hydrolysis_glycolysis	3.584690637758258E8
vac_C	9.742280832273917E7
vac_C_root	1.6097662380864661E7
vac_N	1.3696630648548363E7
vac_N_root	2263163.4186249636
vac_P	1.4087962952792602E7
vac_P_root	2327825.230585677
vac_S	3521990.7381981504
vac_S_root	581956.3076464193
vac_suc	5149175.706491131
vac_suc_root	850824.2935088689
**** EOF Flux ****
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Created: 21st Dec 2015 at 16:24

Last updated: 4th Jun 2016 at 21:45

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Version 3 (latest) Created 4th Jun 2016 at 21:45 by Maksim Zakhartsev

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