ZucAt: FBA constraints for dark conditions Version 3
Flux Balance Analysis (FBA) constraints for dark conditions
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FBA_constraints_dark.txt
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**** HEADER **** Type: FBA constraints for dark conditions Version: 1.0 **** EOF HEADER **** **** OBJECTIVE_FUNCTION **** T.Biomass.ext **** EOF OBJECTIVE_FUNCTION **** **** CONSTRAINTS **** # -------------------- Reactions -------------------- # starch synthesis PGM3_plastid = 0 # Calvin cycle (RuBisCO) RPC_plastide = 0 # Photorespiration RPC2_plastide = 0 GLYK = 0 #GDC = 0 # -------------------- Transport -------------------- #Biomass T.Biomass.ext <= 5000 #Starch T.starch.ext >= 0 # Light T.hv.ext = 0 **** EOF CONSTRAINTS ****
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Created: 21st Dec 2015 at 16:08
Last updated: 4th Jun 2016 at 21:44
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Version 3 (latest) Created 4th Jun 2016 at 21:44 by Maksim Zakhartsev
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https://orcid.org/0000-0002-7973-9902
I've become a SysMO DB PAL for MOSES project in 2007 being a post-doc in lab of Prof. Matthias Reuss at University of Stuttgart. In the MOSES project, our major efforts were in the experimental data acquisition for dynamic model of primary carbon and anaerobic energy metabolism in yeast. The model implements prediction of perturbations of two types: glucose pulse and temperature jump. We implement “stimulus-response” methodology for the unraveling the dynamic structure of the network and to ...
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Programme: de.NBI Systems Biology Service Center (de.NBI-SysBio)
Public web page: Not specified
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