Assays

349 Assays visible to you, out of a total of 372

BioDare1

cca1 lhy Long #1 CCR2 marker

Property	Value
BioDare ID	3648
Author	Victoria Hibberd
Institution	University of Edinburgh
License	CC_BY

Description

If periods change during development, then our genetic screens for preiod-altering clock mutants might recover developmental mutants. Leaf movement assays suggestted that period might change. Ten-day data collections in the TopCount were intended to test for such period changes ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Hibberd Victoria

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Plate1118 #1-CCR2 for BioDare, Readme, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:47, Last updated: 19th Jun 2026 at 15:48

cca1 lhy Long #1 CAB2 marker

BioDare1

cca1 lhy Long #1 CAB2 marker

Property	Value
BioDare ID	3647
Author	Victoria Hibberd
Institution	University of Warwick University of Edinburgh
License	CC_BY

Description

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Hibberd Victoria

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Plate1117 #1-CAB2 for BioDare, Readme, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:46, Last updated: 19th Jun 2026 at 15:47

cca1 lhy Long #1 CCA1 marker

BioDare1

cca1 lhy Long #1 CCA1 marker

Property	Value
BioDare ID	3638
Author	Victoria Hibberd
Institution	University of Edinburgh
License	CC_BY

Description

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Hibberd Victoria

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Plate1116 #1-CCA1 for BioDare.1, Readme, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:44, Last updated: 19th Jun 2026 at 15:45

Kim2007 ZTL in blue light

BioDare1

Kim2007 ZTL in blue light

Property	Value
BioDare ID	13228247820844
Author	Kim WY
Institution	Ohio State University
License	CC_BY

Description

Purpose

time courses of TOC1, GI and ZTL proteins in 12:12

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Kim, W.Y.

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Kim2007_wt_LD_TOC1_GI_ZTL_proteins, Kim_Nature07, Kim_Nature07_suppl_tex, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:42, Last updated: 19th Jun 2026 at 15:44

Kim et al. (2005); CO, FT; 16L:8D; WT, elf3

BioDare1

Kim et al. (2005); CO, FT; 16L:8D; WT, elf3

Property	Value
BioDare ID	13790787578160
Author	Kim, W.Y.
Institution	Ohio State University
License	CC_BY

Description

Purpose

The circadian clock regulates many aspects of plant development, including hypocotyl elongation and photoperiodic induction of flowering. ZEITLUPE (ZTL) is a clock-related F-box protein, and altered ZTL expression causes fluence rate-dependent circadian ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Kim, W.Y.

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, kim2005, kim2005

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:39, Last updated: 19th Jun 2026 at 15:41

Sawa et al. (2007); CO; 16L:8D; WT, gi

BioDare1

Sawa et al. (2007); CO; 16L:8D; WT, gi

Property	Value
BioDare ID	13790763084422
Author	Sawa, M.
Institution	Scripps Research Institute
License	CC_BY

Description

Purpose

Precise timing of CONSTANS (CO) gene expression is necessary for day-length discrimination for photoperiodic flowering. The FLAVIN-BINDING, KELCH REPEAT, F-BOX 1 (FKF1), and GIGANTEA (GI) proteins regulate CO transcription in Arabidopsis. We demonstrate ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Sawa, M.

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, sawa2007, sawa2007

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:37, Last updated: 19th Jun 2026 at 15:39

Ito 2007 wt LD PRR9 protein

BioDare1

Ito 2007 wt LD PRR9 protein

Property	Value
BioDare ID	13227547204752
Author	Ito S
Institution	Nagoya University
License	CC_BY

Description

Purpose

PRR9 mRNA and protein were measured under the same conditions. This file has PRR9 protein only.

Comments

This PRR9 protein profile rises more slowly than the FLAG-tagged PRR9 protein in Nakamichi Plant Cell 2010.

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Ito, S.

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Ito PRR9 PCP 07, Ito2007_wt_LD_PRR9_protein, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:35, Last updated: 19th Jun 2026 at 15:37

Ito et al. (2008); GI, FKF1, CDF1, CO, FT; 16L:8D, 10L:14D; WT, toc1, prr5, toc1;prr5

BioDare1

Ito et al. (2008); GI, FKF1, CDF1, CO, FT; 16L:8D, 10L:14D; WT, toc1, prr5, toc1;prr5

Property	Value
BioDare ID	13790751359110
Author	Ito, S.
Institution	Nagoya University
License	CC_BY

Description

Purpose

In Arabidopsis thaliana, many circadian clock-associated genes have been identified. Among them, the eveningexpressed TOC1 (TIMING OF CAB EXPRESSION 1) gene plays a role by forming a transcriptional feedback core loop ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Ito, S.

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, ito2008, ito2008

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:10, Last updated: 19th Jun 2026 at 15:12

Niwa et al. (2007); GI, FKF1, CDF1, CO, FT mRNA; 10L:14D; WT, cca1;lhy, toc1;cca1;lhy

BioDare1

Niwa et al. (2007); GI, FKF1, CDF1, CO, FT mRNA; 10L:14D; WT, cca1;lhy, toc1;cca1;lhy

Property	Value
BioDare ID	13790739219191
Author	Niwa Y.
Institution	Nagoya University
License	CC_BY

Description

Purpose

In Arabidopsis thaliana, the flowering time is regulated through the circadian clock that measures day-length and modulates the photoperiodic CO–FT output pathway in accordance with the external coincidence model. ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Niwa Y.

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, niwa2007, niwa2007

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:07, Last updated: 19th Jun 2026 at 15:09

AT0049

BioDare1

AT0049

Property	Value
BioDare ID	13558463723152
Author	Sarah Hodge
Institution	University of Edinburgh
License	CC_BY

Description

LUC imaging10:10 blue+red into constant light

Purpose

testing acute light responses at dawn and dusk

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Hodge Sarah

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: AT0049.2, BioDare_metadata, Readme, STANDARD_DATAFILE.2, STANDARD_RAWDATAFILE.2, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:05, Last updated: 19th Jun 2026 at 15:06

Nakamichi et al. (2007); FKF1, CDF1, CO, FT; 16L:8D, 10L:14D; WT, prr7;5, prr9;7, cca1;lhy, cca1;lhy;prr7;5

BioDare1

Nakamichi et al. (2007); FKF1, CDF1, CO, FT; 16L:8D, 10L:14D; WT, prr7;5, prr9;7, cca1;lhy, cca1;lhy;prr7;5

Property	Value
BioDare ID	13790777856363
Author	Nakamichi, N.
Institution	Nagoya University
License	CC_BY

Description

Purpose

Photoperiodism allows organisms to measure daylength, or external photoperiod, and to anticipate coming seasons. Daylength measurement requires the integration of light signal and temporal ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Nakamichi Norihito

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, nakamichi2007, nakamichi2007

Snapshots: No snapshots

Created: 19th Jun 2026 at 15:02, Last updated: 19th Jun 2026 at 15:04

Nakamichi_2010_draft: PRR9,PRR7,PRR5

BioDare1

Nakamichi_2010_draft: PRR9,PRR7,PRR5

Property	Value
BioDare ID	13401436566946
Author	Norihito Nakamichi
Institution	RIKEN Plant Science Center
License	CC_BY

Description

Literature data from: 'PSEUDO-RESPONSE REGULATORS 9, 7, and 5 are transcriptional repressors in the Arabidopsis circadian clock.' by: Norihito Nakamichi.

An interlocking transcriptional-translational feedback loop of clock-associated genes is thought ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Nakamichi Norihito

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Nakamichi 2010 Fig5, Nakamichi Fig6, Nakamichi data for upload, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, nakamichi PRRs PC 10 all

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:39, Last updated: 19th Jun 2026 at 14:41

Matsushika2000_wt_LD_PRR975_mRNA

BioDare1

Matsushika2000_wt_LD_PRR975_mRNA

Property	Value
BioDare ID	13228202468812
Author	Matsushika A
Institution	Nagoya University
License	CC_BY

Description

Purpose

typical time course of PRR9, PRR7, PRR5 in 12:12

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Matsushika A

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Matsushika2000_wt_LD_PRR975_mRNA, Readme, STANDARD_DATAFILE.1, STANDARD_RAWDATAFILE.1, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:34, Last updated: 19th Jun 2026 at 14:36

Song et al. (2012); WT, fkf1, COox, COox;fkf1 and COoxCDF1ox in SD and LD at 22oC.

BioDare1

Song et al. (2012); WT, fkf1, COox, COox;fkf1 and COoxCDF1ox in SD and LD at 22oC.

Property	Value
BioDare ID	13228237712731
Author	Song, Y.H.
Institution	University of Washington
License	CC_BY

Description

Literature data from: 'FKF1 conveys timing information for CONSTANS stabilization in photoperiodic flowering' by: Song, Y.H..

CDF1 and FKF1 have previously been shown to regulate CO mRNA. This data highlights that they ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Song, Y.H.

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, floweringdataprotein, song2012

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:27, Last updated: 19th Jun 2026 at 14:29

Song et al. (2012); WT, fkf1, COox, COox;fkf1 and COoxCDF1ox in SD and LD at 22oC.

BioDare1

Song et al. (2012); WT, fkf1, COox, COox;fkf1 and COoxCDF1ox in SD and LD at 22oC.

Property	Value
BioDare ID	13227587445347
Author	Song, Y.H.
Institution	University of Washington
License	CC_BY

Description

Literature data from: 'FKF1 conveys timing information for CONSTANS stabilization in photoperiodic flowering' by: Song, Y.H..

CDF1 and FKF1 have previously been shown to regulate CO mRNA. This data highlights that they ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Song, Y.H.

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, floweringdata, song2012

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:25, Last updated: 19th Jun 2026 at 14:27

The TIME FOR COFFEE Gene Maintains the Amplitude and Timing of Arabidopsis Circadian Clocks

BioDare1

The TIME FOR COFFEE Gene Maintains the Amplitude and Timing of Arabidopsis Circadian Clocks

Property	Value
BioDare ID	13227577822113
Author	Hall A
Institution	University of Edinburgh
License	CC_BY

Description

Literature data from: 'The TIME FOR COFFEE gene maintains the amplitude and timing of Arabidopsis circadian clocks' by: Hall A.

Plants synchronize developmental and metabolic processes with the earth’s 24-h rotation ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Hall A

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE.1, STANDARD_RAWDATAFILE.1, Sample_list, hall2003, mbsamples2

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:23, Last updated: 19th Jun 2026 at 14:25

FLOWERING LOCUS C Controls Temperature Response of the Arabidopsis Clock

BioDare1

FLOWERING LOCUS C Controls Temperature Response of the Arabidopsis Clock

Property	Value
BioDare ID	13227500410222
Author	Edwards KD
Institution	University of Edinburgh
License	CC_BY

Description

Literature data from: 'FLOWERING LOCUS C mediates natural variation in the high-temperature response of the Arabidopsis circadian clock' by: Edwards KD.

Authors have analyzed FLC alleles in near-isogenic lines and induced mutants ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Kieron D Edwards

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, mbsamples

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:21, Last updated: 19th Jun 2026 at 14:22

Mizoguchi2002_wt_gi_LL_LHY_CCA1

BioDare1

Mizoguchi2002_wt_gi_LL_LHY_CCA1

Property	Value
BioDare ID	13228428214032
Author	Mizoguchi Tsuyoshi
Institution	John Innes Centre
License	CC_BY

Description

Literature data from: 'LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis' by: Mizoguchi Tsuyoshi.

comparison of wt and gi-3 (Ler) in LL

Purpose

LL time courses for LHY, CCA1 mRNA for wt, gi; soil

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Tsuyoshi Mizoguchi

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Mizoguchi2002_wt_gi_LL_LHY_CCA1, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:19, Last updated: 19th Jun 2026 at 14:20

Mizoguchi2002 LHY CCA1 redundancy

BioDare1

Mizoguchi2002 LHY CCA1 redundancy

Property	Value
BioDare ID	13228410657846
Author	Mizoguchi Tsuyoshi
Institution	John Innes Centre
License	CC_BY

Description

Literature data from: 'LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis' by: Mizoguchi Tsuyoshi.

lhy/cca1, lhy, cca1 mutant rhythms were extensively characterized in this paper (lhy-12 in Ler; cca1-1 in ws)

Purpose

LL ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Tsuyoshi Mizoguchi

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Mizoguchi2002_wt_lhycca1_LL_TOC1_GI_LHYL1_COL1_..., Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:17, Last updated: 19th Jun 2026 at 14:19

Mizoguchi2002_wt_lhycca1_16L8D_TOC1_GI_LHYL1_COL1

BioDare1

Mizoguchi2002_wt_lhycca1_16L8D_TOC1_GI_LHYL1_COL1

Property	Value
BioDare ID	13228375909917
Author	Mizoguchi Tsuyoshi
Institution	John Innes Centre
License	CC_BY

Description

Literature data from: 'LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis' by: Mizoguchi Tsuyoshi.

lhy/cca1, lhy, cca1 mutant rhythms were extensively characterized in this paper (lhy-12 in Ler; cca1-1 in ws) ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Tsuyoshi Mizoguchi

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Mizoguchi2002_wt_lhycca1_16L8D_TOC1_GI_LHYL1_CO..., Readme, STANDARD_DATAFILE.2, STANDARD_RAWDATAFILE.2, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:15, Last updated: 19th Jun 2026 at 14:17

Mizoguchi_wt_lhycca1_LD_TOC1

BioDare1

Mizoguchi_wt_lhycca1_LD_TOC1

Property	Value
BioDare ID	13227435953899
Author	Mizoguchi Tsuyoshi
Institution	John Innes Centre
License	CC_BY

Description

Literature data from: 'LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis' by: Mizoguchi Tsuyoshi.

lhy/cca1 mutant rhythms were extensively characterized in this paper (lhy was in Ler; cca1 in ws)

Purpose

good quality 16:8 data, ...

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Tsuyoshi Mizoguchi

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Mizoguchi2002_wt_lhycca1_16L8D_TOC1, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:14, Last updated: 19th Jun 2026 at 14:15

Helfer2011_wt_LD_LUX_PRR9

BioDare1

Helfer2011_wt_LD_LUX_PRR9

Property	Value
BioDare ID	13227396514409
Author	Helfer A
Institution	University of California San Diego
License	CC_BY

Description

Literature data from: 'LUX ARRHYTHMO encodes a nighttime repressor of circadian gene expression in the Arabidopsis core clock' by: Helfer A.

LUX and PRR9 expression in wild-type plants grown in LD

Purpose

good quality gPCR data; 3%sucrose

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Helfer A

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Helfer2011_wt_LD_LUX_PRR9.1, Helfer_CurrBiol11, Readme, STANDARD_DATAFILE.1, STANDARD_RAWDATAFILE.1, Sample_list

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:11, Last updated: 19th Jun 2026 at 14:13

27C RBL-cryptochrome paper-rep3

BioDare1

27C RBL-cryptochrome paper-rep3

Property	Value
BioDare ID	13391620428613
Author	Peter Gould
Institution	University of Liverpool
License	CC_BY

Description

27C, RBL, on sucrose

Purpose

Temperature-comp-photoreceptor mutants

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Gould Peter

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE.1, STANDARD_RAWDATAFILE.1, Sample_list, test-27RBL-rep3.1

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:09, Last updated: 19th Jun 2026 at 14:11

17C RBL-cryptochrome paper-rep3

BioDare1

17C RBL-cryptochrome paper-rep3

Property	Value
BioDare ID	13391620325732
Author	Peter Gould
Institution	University of Liverpool
License	CC_BY

Description

17C, RBL, on sucrose

Purpose

Temperature-comp-photoreceptor mutants

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Gould Peter

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, test-17RBL-rep3

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:07, Last updated: 19th Jun 2026 at 14:09

12C RBL-cryptochrome paper-rep3

BioDare1

12C RBL-cryptochrome paper-rep3

Property	Value
BioDare ID	13391620137471
Author	Peter Gould
Institution	University of Liverpool
License	CC_BY

Description

12C, RBL, on sucrose

Purpose

Temperature-comp-photoreceptor mutants

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Gould Peter

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, test-12RBL-rep3

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:05, Last updated: 19th Jun 2026 at 14:07

27C RBL-cryptochrome paper-rep2

BioDare1

27C RBL-cryptochrome paper-rep2

Property	Value
BioDare ID	13391602100179
Author	Peter Gould
Institution	University of Liverpool
License	CC_BY

Description

Purpose

Temperature-comp-photoreceptor mutants

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Gould Peter

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, test-27RBL-rep2

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:03, Last updated: 19th Jun 2026 at 14:05

17C RBL-cryptochrome paper-rep2

BioDare1

17C RBL-cryptochrome paper-rep2

Property	Value
BioDare ID	13391596408158
Author	Peter Gould
Institution	University of Liverpool
License	CC_BY

Description

Purpose

Temperature-comp-photoreceptor mutants

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Gould Peter

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, test-17RBL-rep2

Snapshots: No snapshots

Created: 19th Jun 2026 at 14:01, Last updated: 19th Jun 2026 at 14:03

12C RBL-cryptochrome paper-rep2

BioDare1

12C RBL-cryptochrome paper-rep2

Property	Value
BioDare ID	13391584568887
Author	Peter Gould
Institution	University of Liverpool
License	CC_BY

Description

Purpose

Temperature-comp-photoreceptor mutants

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Gould Peter

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, test-12RBL-rep2

Snapshots: No snapshots

Created: 19th Jun 2026 at 13:59, Last updated: 19th Jun 2026 at 14:01

17C RBL-cryptochrome paper-rep1

BioDare1

17C RBL-cryptochrome paper-rep1

Property	Value
BioDare ID	13391579462696
Author	Peter Gould
Institution	University of Liverpool
License	CC_BY

Description

Purpose

Temperature-comp-photoreceptor mutants

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Gould Peter

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE, STANDARD_RAWDATAFILE, Sample_list, test-17RBL-rep1

Snapshots: No snapshots

Created: 19th Jun 2026 at 13:57, Last updated: 19th Jun 2026 at 13:59

12C RBL-cryptochrome paper-rep1

BioDare1

12C RBL-cryptochrome paper-rep1

Property	Value
BioDare ID	13391556580623
Author	Peter Gould
Institution	University of Liverpool
License	CC_BY

Description

Purpose

Temperature-comp-photoreceptor mutants

Comments

Submitter: Daniel Thedie

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Gould Peter

Study: Unpublished

Organisms: Arabidopsis thaliana

SOPs: No SOPs

Data files: BioDare_metadata, Readme, STANDARD_DATAFILE.1, STANDARD_RAWDATAFILE.1, Sample_list, test-12RBL-rep1.1

Snapshots: No snapshots

Created: 19th Jun 2026 at 13:56, Last updated: 19th Jun 2026 at 13:57

Assays

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cca1 lhy Long #1 CCR2 marker

Description

cca1 lhy Long #1 CAB2 marker

Description

cca1 lhy Long #1 CCA1 marker

Description

Kim2007 ZTL in blue light

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Kim et al. (2005); CO, FT; 16L:8D; WT, elf3

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Sawa et al. (2007); CO; 16L:8D; WT, gi

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Ito 2007 wt LD PRR9 protein

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Ito et al. (2008); GI, FKF1, CDF1, CO, FT; 16L:8D, 10L:14D; WT, toc1, prr5, toc1;prr5

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Niwa et al. (2007); GI, FKF1, CDF1, CO, FT mRNA; 10L:14D; WT, cca1;lhy, toc1;cca1;lhy

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AT0049

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Nakamichi et al. (2007); FKF1, CDF1, CO, FT; 16L:8D, 10L:14D; WT, prr7;5, prr9;7, cca1;lhy, cca1;lhy;prr7;5

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Nakamichi_2010_draft: PRR9,PRR7,PRR5

Description

Matsushika2000_wt_LD_PRR975_mRNA

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Song et al. (2012); WT, fkf1, COox, COox;fkf1 and COoxCDF1ox in SD and LD at 22oC.

Description

Song et al. (2012); WT, fkf1, COox, COox;fkf1 and COoxCDF1ox in SD and LD at 22oC.

Description

The TIME FOR COFFEE Gene Maintains the Amplitude and Timing of Arabidopsis Circadian Clocks

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FLOWERING LOCUS C Controls Temperature Response of the Arabidopsis Clock

Description

Mizoguchi2002_wt_gi_LL_LHY_CCA1

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Mizoguchi2002 LHY CCA1 redundancy

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Mizoguchi2002_wt_lhycca1_16L8D_TOC1_GI_LHYL1_COL1

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Mizoguchi_wt_lhycca1_LD_TOC1

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Helfer2011_wt_LD_LUX_PRR9

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27C RBL-cryptochrome paper-rep3

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17C RBL-cryptochrome paper-rep3

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12C RBL-cryptochrome paper-rep3

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27C RBL-cryptochrome paper-rep2

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