The SOP creates a separate SBML model for each drug and condition, as the PEtab problem contains diffrent experimental data for them.

However, the SBML models only differ in their name as for all drugs and conditions, the same exponential decay model was assumed.

The SBMLs are automatically created by yaml2sbml, when the SOP is executed. Therefore, these files are for completeness only and are not necessary to replicate the analysis.


2 items are associated with this Model:
  • SBML (Zip file - 19.5 KB) Download
  • SBML (Zip file - 17.7 KB) Download

Organism: Mus musculus

Model type: Ordinary differential equations (ODE)

Model format: SBML

Execution or visualisation environment: Not specified

Model image: No image specified

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Views: 537   Downloads: 6

Created: 22nd Jul 2022 at 10:11

Last updated: 9th Dec 2022 at 07:08

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Version History

Version 2 (latest) Created 7th Dec 2022 at 17:08 by Sebastian Höpfl

Increased sample size to 200,000 on 4 parallel chains. Increased bounds of parameters to a uniform prior distribution in the interval [0, 100] for parameters A and B and [0,1000] for σ.

Version 1 (earliest) Created 22nd Jul 2022 at 10:12 by Sebastian Höpfl

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