Salazar_et_al_2009_Photoperiodism_Model - PLM_74

This is the SimileXML for the Salazar2009_FloweringPhotoperiod model in PlaSMo. It corresponds to Model 3 in the publication of Salazar et al 2009. The Simile version of this model is also attached here. <strong>Instructions to run the Photoperiodism Model in Simile</strong> 1.       Save all the files into the same folder. 2.       Copy and paste the attached ‘lightfunction.pl’ file in the following folder:            Program File &gt; Simile6.0 (or other software version)&gt; Functions  3.       Download the attached Simile file or import the XML into Simile:            a.       File &gt; Import &gt; XML Model Description 4.       To run the model:               a.       Model &gt; Run or click on the ‘Play’ (triangle) button 5.       When you run the model for the first time, you will be prompted to load the parameter file. To do so:              a.       Load the ‘Salazar model.spf’ file at the TOP LEVEL    6.       The time unit and time step also need to be adjusted as follows:            a.       The time step can be set in the run display window. The time step #1 should be set to 0.001            b.      The time unit should be changed to ‘hour’, which can be done in the ‘Run settings’ tab in the run display window<br><br><strong>Related Publications</strong><br>Salazar JD, Saithong T, Brown PE, Foreman J, Locke JC, Halliday KJ, Carré IA, Rand DA, Millar AJ.  (2009). Prediction of photoperiodic regulators from quantitative gene circuit models . Cell. Retrieved from: http://www.ncbi.nlm.nih.gov/pubmed/20005809  <br><br><strong>Originally submitted to PLaSMo on 2013-11-12 15:06:57</strong>
Help
help Creators and Submitter
Creators
Submitter
Activity

Views: 1109

Created: 10th Jan 2019 at 17:39

Last updated: 7th May 2019 at 13:25

Related items

Powered by
(v.1.11.3)
Copyright © 2008 - 2021 The University of Manchester and HITS gGmbH

By continuing to use this site you agree to the use of cookies