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57 Data files visible to you, out of a total of 108

The aim of the exposure was to study the effects of activation of peroxisome proliferator-activated receptors (PPARs) in Atlantic cod (Gadus morhua), by injecting the fish with the compounds WY-14,643 and GW501516. Using luciferase reporter assay in vitro, we have shown that WY-14,643 activate Atlantic cod Ppara1 and Ppara2, while GW501516 activate Ppara1, Ppara2, and Pparb. The experimental set-up was as follows: Immature cod were injected at day 0 and day 4 with either high dose (40 mg/kg ...

Creators: None

Submitter: Marta Eide

Untargeted lipidomics analysis was performed on plasma and liver samples of four male fish from each group (n = 4) at Per Bruheim’s lab at NTNU, Norway, using Liquid Chromatography Hybrid Quadrupole Mass Spectrometry (UPLC-HDMS).

Normalisation: The fraction of each lipid compound among all measured lipids in every sample was calculated and was used in the downstream analysis.

Creators: None

Submitter: Marta Eide

No description specified

Creators: None

Submitter: Marta Eide

No description specified

Creators: None

Submitter: Marta Eide

No description specified

Creators: None

Submitter: Marta Eide

No description specified

Creators: None

Submitter: Marta Eide

No description specified

Creators: None

Submitter: Marta Eide

No description specified

Creators: None

Submitter: Marta Eide

Quantification of CPM and TCP concentrations in cod liver and bile using gas chromatography

Creator: Karina Dale

Submitter: Karina Dale

Levels of cortisol+total protein and activities of cholinesterase, alanine aminotransferase (ALAT) and aspartate aminotransferase (ASAT) in plasma of cod exposed to chlorpyrifos-methyl

Creators: Karina Dale, Pål A. Olsvik

Submitter: Karina Dale

EROD activity in liver of cod exposed to chlorpyrifos-methyl

Creator: Karina Dale

Submitter: Karina Dale

Overview of metabolomics results from liver of cod exposed to chlorpyrifos-methyl

Creator: Karina Dale

Submitter: Karina Dale

No description specified

Creator: Pål A. Olsvik

Submitter: Marta Eide

Biometrics of IVN fish exposed to chlorpyrifos-methyl

Information connecting RNA seq fastq-files to corresponding fish ID/exposure regime

Creators: Karina Dale, Pål A. Olsvik

Submitter: Karina Dale

The four treatment groups were Control (0 mg CPM/kg, with DMSO), 0.5 mg CPM/kg, 4.2 mg CPM/kg and 23.2 mg CPM/kg. Each treatment group consisted of 9 fish. These fish were sampled from 3 different tanks per treatment, with n=9 per treatment. A total of 36 samples were sequenced. For each sample, about 50 million 150 bp paired-end reads were generated.

Creator: Pål A. Olsvik

Submitter: Marta Eide

No description specified

Creator: Xiaokang Zhang

Submitter: Xiaokang Zhang

No description specified

Creator: Xiaokang Zhang

Submitter: Xiaokang Zhang

No description specified
No description specified

There are four datasheets in the Excel file: 1. Gene pattern and the corresponding category (the gene list is then divided into the other three datasheets); 2. These gene names (patterns) can be directly followed by either a letter or a number; 3. These gene names (patterns) should be directly followed by a letter; 4. These gene names (patterns) should be directly followed by a number.

No description specified

Biometric data from in vivo II experiment

The reactions existing in the auto-generated draft model are shown in blue, and the manually filled gaps are shown in green. Comparing our draft model with the same subsystem from model iHepatocytes2322, the missing reactions are highlighted in pink. The pink dots indicate the parent toxicants.

No description specified

Creator: Xiaokang Zhang

Submitter: Xiaokang Zhang

gadMorTrinity can be found at: https://doi.org/10.6084/m9.figshare.13067354.v1

Creator: Xiaokang Zhang

Submitter: Xiaokang Zhang

COBRA Matlab toolbox was used.

Data file containing protein ID and pre-processed proteomic data, in addition to protein groups (peptide counts etc) determined in cod liver of cod exposed to PAH and PFAS mixtures.

Creator: Karina Dale

Submitter: Karina Dale

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