Models

153 Models visible to you, out of a total of 248

Arabidopsis clock model P2011.1.2

Millar group

This version is P2011.1.2, model ID PLM_71 version 1. Dynamics identical to P2011.1.1 of the Pokhilko et al. 2012 publication.

http://www.plasmo.ed.ac.uk/plasmo/models/download.shtml?accession=PLM_71&version=1

Creator: Andrew Millar

Submitter: Andrew Millar

Model type: Ordinary differential equations (ODE)

Model format: SBML

Environment: JWS Online

Organism: Arabidopsis thaliana

Investigations: Absolute units in Arabidopsis clock models up t..., Prediction and analysis of phenotypes in the Ar...

Studies: Construction of Framework Model version 2 (FMv2), Rescaling the P2011 model to match RNA data

Assays: Simulating clock gene expression with model P20..., TiMet RNA timeseries data and starting models

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Created: 1st Feb 2017 at 21:32, Last updated: 27th Mar 2018 at 13:54

Estimation of translation and turnover - python scripts

Millar group

Python scripts to run the analysis estimating rates of protein synthesis in the light and dark, and overall rates of protein turnover, in Cyanothece and Ostrecoccus tauri.

Creators: Daniel Seaton, Andrew Millar

Submitter: Daniel Seaton

Model type: Not specified

Model format: Not specified

Environment: Not specified

Organism: Not specified

Investigations: Photoperiodic control of the Arabidopsis proteo...

Studies: Proteome and translation rate data for the Ostr...

Assays: Estimation of rates of translation and turnover...

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Created: 15th Jan 2018 at 07:26, Last updated: 21st Feb 2018 at 11:32

Translational coincidence modelling - python scripts

Millar group

No description specified

Creator: Daniel Seaton

Submitter: Daniel Seaton

Model type: Algebraic equations

Model format: Not specified

Environment: Not specified

Organism: Arabidopsis thaliana

Investigations: Photoperiodic control of the Arabidopsis proteo...

Studies: Modelling and analysis of translational coincid...

Assays: Translational coincidence model

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Created: 4th Dec 2017 at 21:42, Last updated: 20th Feb 2018 at 22:03

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