People

ERASysAPP9 Era CoBioTech3 FAIRDOM1

LEANPROT9 COVID-19 Disease Map277 PSYSMO52 MESI-STRAT50 DigiSal48 FAIRDOM user meeting45 nfdi4health - German National Research Data Infrastructure for Personal Health Data42 BaCell-SysMO40 SysMO-LAB40 GenoSysFat40 Kinetics on the move - Workshop 201640 PoLiMeR - Polymers in the Liver: Metabolism and Regulation40 ICYSB 2015 - International Practical Course in Systems Biology37 CC-TOP36 TRANSLUCENT35 STREAM35 COVID-19 related studies and tools in Germany34 HUMET Startup32 EmPowerPutida32 COSMIC31 FAIRDOM31 SUMO29 SCyCode The Autotrophy-Heterotrophy Switch in Cyanobacteria: Coherent Decision-Making at Multiple Regulatory Layers29 KOSMOBAC27 Rhodolive27 SulfoSys26 Systems toxicology of Atlantic cod26 COMBINE Multicellular Modelling26 OXYMOD26 BESTER26 Working Group Nicole Radde24 SYSTERACT22 SEEK tutorial for DigiSal22 SCaRAB21 SulfoSys - Biotec21 MOSES20 TRALAMINOL19 INDIE - Biotechnological production of sustainable indole19 CoolWine19 iRhythmics18 SNAPPER: Synergistic Neurotoxicology APP for Environmental Regulation18 IMOMESIC17 SBEpo - Systems Biology of Erythropoietin17 EnzymeML17 GMDS Project Group "FAIRe Dateninfrastrukturen für die Biomedizinische Informatik"17 MIX-UP17 INBioPharm16 PhotoBoost16 SilicoTryp15 SysVirDrug15 SysMetEx15 MetApp15 Environmentally-friendly bioadhesives from renewable resources (WooBAdh)15 FAIRDOM Community Workers15 NIRBTEST15 Sustainable co-production14 C1Pro14 AquaHealth (ERA-BlueBio)14 SysMO DB13 MycoSynVac - Engineering Mycoplasma pneumoniae as a broad-spectrum animal vaccine13 HOTSOLUTE13 WG1 - Compound libraries coordination and integration of compound design13 SDBV/HITS13 SysMilk12 WURSynBio12 BioZEment 2.012 Auromega12 Xenophiles Systems Biology12 Cell4Chem12 XyloCut11 Standardization of enzyme-catalyzed reaction measurement11 Standardization of enzyme-catalyzed reaction modelling11 SYLOBIO11 de.NBI-SysBio10 Colosys10 SAFE-Aqua10 PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops10 Project Coordination10 ROBUSTYEAST9 Example use cases9 EraCoBiotech 2 nd call proposal preparation9 FAIRDOM & LiSyM & de.NBI Data Structuring Training9 SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture9 SynBio4Flav9 _p_stRT9 CEPOPA - Development of sustainable chemoenzymatic processes for optically pure amines from alcohols or alkynes9 NMTrypI - New Medicines for Trypanosomatidic Infections9 SASKit: Senescence-Associated Systems diagnostics Kit for cancer and stroke9 WP 4: Evaluation of drug activity against multiple life cycle stages of malaria parasites9 WG2 - Integration of early phase studies and low environmental impact actions9 Noisy-Strep8 CropClock8 MS_DILI8 INCOME8 ModeleXchange initiative8 Hi-IMPAcTB8 Covid-19 Interferon pathway modelling and analysis8 WP 5: Intradermal 3D drug device administration8 WineSys7 ExtremoPharm7 Chronic Liver Disease Progression (LiSyM-DP - Pillar II)7 Regeneration and Repair in Acute-on-Chronic Liver Failure (LiSyM-ACLF - Pillar III)7 NTNU Health Druglogics7 Systems modelling age-related changes in the maintenance of dermal extra-cellular matrix: mechanisms and interventions7 NAD COMPARTMENTATION7 WP 2: Antimalarial drug encapsulation7 EbN1 Systems Biology7 DigiSal-BT81217 Enzymatic biorecycling of PET (PETzyme)7 ODDITY7 Group Data Science7 Implementation of Nanopore Sequencing for Detection of Treatment Induced Transcriptomic and Epitranscriptomic Changes in Leukaemic Tumour Models7 Integrated BIOfactory for the multiproduct valorisation of PIG MAnure (BIOPIGMA)7 ZucAt6 Early Metabolic Injury (LiSyM-EMI - Pillar I)6 The Hedgehog Signalling Pathway (LiSyM-JGMMS)6 Millar group6 CausalDB6 PlaSMo model repository6 Dynamic interplay between nuclei and mitochondria in ageing cells6 Lipofungi6 DeepHyperSpec6 Bio4Fuels6 ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato6 MIT SRP6 BioCreative VII6 WP 3: Drug release kinetics study6 WG3 - Coordination of in vitro-to-in vivo translation of OneHealth leads and candidates6 Macrophage and neutrophil redox proteome in infection with Mycobacterium tuberculosis6 Whole body modelling of glucose metabolism in malaria patients5 WG Infrastructure for Translational Research5 TiMet5 Light and plant development5 LIGNOLIPP5 ERNEST Mapping Group Pilot Study5 Modelling COVID-19 epidemics5 C19DM-Neo4j5 WP 1: Biodegradable and responsive polymer matrix5 SABIO-VIS5 MESI-STRAT Review5 ToxiGen - Reproductive toxicity and transgenerational effects of petroleum mixtures in fish5 MESI-Review 20245 LiSyM Core Infrastructure and Management (LiSyM-PD)4 Model Guided Pharmacotherapy In Chronic Liver Disease (LiSyM-MGP)4 Multi-Scale Models for Personalized Liver Function Tests (LiSyM-MM-PLF)4 pISA-tree4 Service to URV Tarragona, Spain with respect to their Safety Assessment of Endocrine Disrupting Chemicals model (Active NOW)4 Multiscale modelling of state transitions in the host-microbiome-brain network4 Regulation of flowering time in natural conditions4 OLCIR: Optimization of Lung Cancer Therapy with Ionizing Radiation4 Light control of leaf development4 Stress granules4 Simulation Foundries4 ComPASs - Common Pathways in Amyotrophic Lateral Sclerosis (ALS) and Spinal Muscular Atrophy (SMA)4 Mass spectrometry proteomics for biomarker discovery4 The BeeProject4 SteaPKMod4 MetNet4 VHP project4 Project 3: Multipotent ABCB5(+) Stem Cells for Therapy of Age-related Skin Disorders4 Project 1: Metabolic Reprogramming and Regeneration in the Aged Epidermis4 Project 2: Epigenetic regulation of skin regeneration4 Targeting the immunoproteasome: Analyzing the biological effects of specific versus pan inhibition4 Methylation differences during respiratory infection4 EDITH (Ecosystem Digital Twins in Health) test project4 BioTarget Database4 Compound Data4 RootBook3 Molecular Systems Biology3 Liver Function Diagnostics (LiSyM-LiFuDi - Pillar IV)3 Molecular Steatosis - Imaging & Modeling (LiSyM-MSIM)3 HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato3 Computational pathway design for biotechnological applications3 Bergen(Ziegler lab) project AF-NADase3 NAD phylogeny3 Outreach - Senescence RStudio-Shiny application3 Outreach - Simulation of cellular senescence using an agent based modelling approach3 CML for thermophysical properties of mixtures3 miRiAD - exploring the role of microRNAs in T cell function and anti-viral defence3 LungCARD - Blood test for clinical therapy guidance of non-small cell lung cancer patients3 Mechanism based modeling viral disease ( COVID-19 ) dynamics in human population3 Reduce Complexity (RCO) reconstruction3 Ultreia3 C19DM - Macrophage logical model3 Selective Destruction in Ageing3 NL-Bioimaging FAIR Metadata Templates3 WG5 - Promote dissemination3 WG6 - Promote the transfer of knowledge3 Establishing an innovative and transnational feed production approach for reduced climate impact of the aquaculture sector and future food supply3 Adaptation of Salmonella enterica3 Virtual Human Platform for Safety Assessment3 WATCHER3 VIALACTEA3 Group Microbial Interface Biology3 Core Facility Fluorescence Cytometry3 OMICS of vascular smooth muscle cells under oxidative stress3 SysMO Funders2 ErasysApp Funders2 Make Me My Model2 Service to Universidade Católica Portugues with respect to their Molecular Insight into Autism Spectrum Disorder (ASD) model (Active NOW)2 Service to Slovenia with respect to their Protease signaling network in neurodegeneration model (Active NOW)2 MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection2 POP - the Parameter Optimisation Problem2 Crossover Research 2.02 Extremophiles metabolsim2 Yeast glycolytic oscillations2 Are microRNAs key mediators of cartilage destruction in osteoarthritis?2 NAMPT affinity2 Outreach - Simulation of breast cancer development using an agent based modelling approach2 Outreach - Breast Cancer RStudio-Shiny application2 CF transcriptome2 UnCentre - Unlocking satellite DNA and centromere structure in vertebrate chromosomes2 Toggle switch2 Genetic diversity and forage yield of perennial ryegrass2 Finding interaction partners of thylakoid membrane insertase2 Characterization of P. tricornutum chloroplast protein mutants2 Testing FairdomHub functionality2 MPW-Val2 Consensus Hallmark Annotation2 CoVIDD - Coronavirus interactions in drug discovery - optimization and implementation2 Towards Reproducible Enzyme Modeling2 Establishing an innovative and transnational feed production approach for reduced climate impact of the aquaculture sector and future food supply2 Molecular characterization and angiogenic properties of extracellular vesicles in healthy and preeclamptic amniotic fluid2 Thymidylate synthase dimer dissociation2 Overexpression of microRNAs miR-25-3p, miR-185-5p and miR-132-3p in Late Onset Fetal Growth Restriction, Validation of Results and Study of the Biochemical Pathways Involved2 SDBV ephemeral data exchanges2 Heat stress response of the red-tide dinoflagellate Prorocentrum cordatum2 The nucleus of Prorocentrum cordatum2 FAIR Functional Enrichment2 WP2.4 - Block copolymers for tethering to surfaces2 Glucose metabolism in cancer cell lines2 Conspicuous chloroplast with LHC‒PSI/II‒megacomplex and diverse PBPs in the marine dinoflagellate Prorocentrum cordatum2 Catabolic network of the gut bacteria P. vulgatus2 TestingSeek2 Bioreactor/Omics Phocaeicola vulgatus2 BioRECIPE representation format2 Data science Übung2 Lipid droplet formation and dynamics in murine macrophages2 Revisiting mutational resistance to ampicillin and cefotaxime in Haemophilus influenzae2 Biochemical characterization of the feedforward loop between CDK1 and FOXM1 in epidermal stem cells2 Manchester Institute for Biotechnology1 Systo models1 Service to Milano-Bicocca with respect to their ATP-ROS model (Active NOW)1 Service to University of Lisbon (Portugal) with respect to their CFTR maturation model (Active NOW)1 Service to LCSB (Luxembourg) with respect to ROS management in Parkinson’s disease and cancer model (Active NOW)1 Service to University of Duisburg- Essen (Germany): with respect to their The Yin-Yang of Metabolism; Endometatoxicity (YYME) model (Active NOW)1 Service to Sheffield University (UK): with respect to Mitochondrial perfect adaptation model (Active NOW)1 Service to Sanquin (Amsterdam): with respect to Modelling of acute and chronic inflammation (Prospective)1 Service to Munich (Germany): with respect toCharged peptide to charged membrane binding model (Prospective)1 Training Hunfeld1 Mathematical modelling of the antibiotic-induced morphological transition of Pseudomonas aeruginosa1 ROS detailed model for MSB manucript1 Steroid biosynthesis1 Proteogenomics of melanoma1 DCM1 Lobet's group1 Escherichia coli chemical product tolerance1 Fairdom Hub documents1 RStudio-Shiny and Java_API connection testing1 Thesis1 BIOMICRO PROJECT1 Agro-ecological modelling1 GPSLab testing1 Interface MIAPPE / BrAPI1 Unlock1 Test Project1 Mapping Disease Modules Overlaps in Biological Networks1 RDM awareness1 Perennial ryegrass1 MPIEvolBio-SciComp1 MRRDEP1 Acetyl-coa production in Pseudomonas putida1 Biomics Projects1 Thrust C21 Study of Pleiomorphic Ensembles1 Model Driven Prime Editing1 PULSE 2.01 Plant optogenetics1 Hidden project1 BiocompUP Test Project1 Hidden project 21 Towards a mechanistic understanding of von Hippel-Lindau syndrome in different tissues1 The Beer Project1 Backup Transcriptomic data1 Test Project (dummy)1 Translational Bioinformatics1 Medical Biometry, Epidemiology, Medical Informatics1 An overview of systematic reviews of treatment of polycystic ovary syndrome with Chinese medicine1 Thermodynamics1 Non equilibrium thermodynamics1 Book on Thermodynamics, and kinetics1 Supplemental Data for "Why did the eyewall replacement cycle in Trami terminate rapidly? "1 Scalp Acupuncture and Treadmill Training Inhibits Neuronal Apoptosis Through Activating cIAP1 in Cerebral Ischemia Rats1 Hello1 Clostridium beijerinckii pan-genome1 Bio-crop1 ORHIZON1 Coastal Data1 Electroacupuncture preconditioning reduces oxidative stress in the acute phase of cerebral ischemia-reperfusion in rats by regulating iron metabolism pathways1 _p_RNAinVAL1 hybrid sequencing1 Teaching Alien Biology1 HOST-PAR1 Outdated material1 The Effect of Nape Acupuncture Combined with Rehabilitation Training on Dysphagia After Stroke: A Meta-analysis1 tst1 tst21 Boolean modeling of Parkinson disease map1 Aneurinibacillus thermoaerophilus CCM 8960 metabolic pathways model1 Orphan cytochrome P450 20a1 CRISPR/Cas9 mutants and neurobehavioral phenotypes in zebrafish1 AGENSI1 Viral Metagenomic1 Public project1 JUANGMC1 Synthetic biology in Synechococcus for bioeconomy applications (SynEco)1 testproject1 Test project1 Comparative Proteome Profile of Placental Sub-anatomical regions1 Fusion-fission-mitophagy1 PHENET1 LiceVault1 Testing tools for research data management1 UMRPégase1 Investigation of the activity of antisense oligonucleotides targeting multiple genes1 DeCipher1 middle ear1 datamgmt1 MultiDefence - sLoLa1 Institut Pasteur's projects1 qpcr1 MRC-UNICORN1 Unshackling Membrane Protein Research: New Amphiphilic Copolymers for Extraction of Stable, Active Membrane Proteins1 BioDynamics1 Playground1 WG4 - Integration of R&D process-environmental studies and translation in informed whitepaper1 Test project for Sciender1 qPCR1 Artificial organelles_Pathogen digestion1 Supplementary Information 2 associated with the manuscript entitled " Label free Mass spectrometry proteomics reveals different pathways modulated in THP-1 cells infected with therapeutic failure and drug resistance Leishmania infantum clinical isolates"1 PTPN11 mutagenesis1 WP1 - Structure-activity relationships of amphiphilic copolymers1 WP2.1 - Mono-chain-end functional amphiphilic copolymers1 WP2.2 - Hetero di-chain-end functional amphiphilic copolymers1 WP2.3 - Meta-stable amphiphilic copolymers1 WP2.5 - Fusion of SMALPs1 WP2.6 - SMALPs for photosynthetic research1 WP3 - Scalability of polymer production process1 WP4 - Community engagement and technical advice1 The deregulated interplay of complement system and antioxidant activity as a driver of adverse pregnancy outcomes1 Supplementary Information 2 associated with the manuscript entitled "Label free Mass spectrometry proteomics reveals different pathways modulated in THP-1 cells infected with therapeutic failure and drug resistance Leishmania infantum clinical isolates"1 iPlacenta- Placenta on a chip1 Pan-cancer multiSOM project1 Near Surface Wave-Coherent Measurements of Temperature and Humidity1 A Meta-Analysis of Functional Recovery of Aphasia after Stroke by Acupuncture Combined with Language Rehabilitation Training1 Phytoplankton phenology in the Bay of Biscay: using remote sensing to assess and raise awareness of climate change impacts on the sea1 Master-BIDS1 Endometriosis1 Vitis Data Crop1 ARAX: a web-based computational reasoning system for translational biomedicine1 I AM FRONTIER1 .1 PhD Nicotinic Acetylcholine Receptors1 Hydrocow1 SFB1361 playground1 Amaizing1 Stochastics and bursting1 icpm-kth1 sample project1 We learn to fairdomhub @IBG1 Beads analysis1 Genomic Medicine1 Remodeling of cIV1 Optimizing biocatalytic flow reactors via inline NMR-analysis1 PROMISEANG1 URGI1 SampleDB1 Matsutake1 UNDESIRABLE EFFECTS OF POST COVID-19 VACCINATION: A DESCRIPTIVE STUDY, WINTER 20221 Semantic Table Interpretation in Chemistry1 MS identification of L infantum proteins related to their drug resistance patterns for new drug targets identification and ecotoxicological evaluations of their environmental and interspecies impact1 the Supplementary materials for paper1 Japanese Data in Global Plant Research: A FAIDARE and BrAPI Project1 Measurement of Fisheries Provisioning Services and its Pressure to Support Sustainability of Fisheries in The Jatigede Reservoir, Indonesia1 FIsh data on 2022 in the Jatigede Reservoir1 ImmPort - data sharing1 REWIRED: comparative RNA-seq and ATAC-seq in six salmonids and six outgroup telest fishes1 REWIRED1 Data Repository1 APPN Test Project1 Enhanced Anticancer Effect of Thymidylate Synthase Dimer Disrupters Promoting Intracellular Accumulation1 LiVE1 BIDS1 UMass Chan BioImage DMS Core_FAIR Metadata Templates1 Function, control and engineering of microbial methylotrophy1 Pectobacterium pangenome1 Proteogneomics of Desulfobacteraceae members1 The evolution of Gene Ontology1 New Optical Coherence Tomography Biomarkers Identified with Deep Learning for Risk Stratification of Patients with Age-related Macular Degeneration1 Virulence-related genes expression in planktonic mixed cultures of Candida albicans and non-albicans Candida species1 Isolieren neuer Gluconobacter Stämme1 Screening of Secondary Plant Metabolites on Antihelmintic Activity in Ascaris scum1 Munich Cluster for Systems Neurology1 16S rRNA-Sequencing1 Mapping Regional Susceptibility to Neurodegenerative Diseases1 Test project May 20241 Biospecimen Collection Protocol1 Winter Wheat (Triticum aestivum L.) Grain Yield, Quality, and Net Photosynthesis When Grown Under Semi-Transparent Cadmium Telluride Photovoltaic Modules Near Maturity1 Benefit for All FAIR Data1 DPL1 Glycogen Metabolism in bacteria1 ILS Ceramide Ring Trial1 Project Test1 DeepCurate1 CropXR1 DataXR1 Cancer Systems Biology Consortium (CSBC)1 Drug Discovery and Biotechnology Standard Operating Procedures1 Fluid flow project1 Smart Garden Watering System1 The role of different fatty acids1 AQUACIRCLE1 IDIM1 Sampling vicinity of industrial settings for pathogens and GMO identification1 Uni Heidelberg URZ-Demo Project1 BlueTools Test1 RNA-seq data for paper1 RNA-seq data1 Academic Scientific Research Group1 TEATIME HCM protocols1 3T3 murine fibroblast as feeder-layer1 Comparative Analysis of decell efficiency and structural integrity of vessels for tissue engineering aplications1 Raman Data1 Subject collection1 Alters-Krebs-Korrelation anhand der Patienteneingänge 20241 Cassava Gates Curation1 GWI-HDMT stemcells1 Quantitative EEG normal values1 Differential abundance analysis of polyA segments in 3' sc/snRNAseq data1 HubMOL1 FATCRACK1 test1 Lipopeptide research @ VIB1 More...

Norwegian University of Science and Technology2 Technische Universität Berlin (TU Berlin)2 Latvia University of Agriculture2 Competence Center of Food and Fermentation Technologies2 SINTEF1 biotechrabbit GmbH1 Institute of Microbiology and Biotechnology, University of Latvia1 More...

Germany3 Estonia2 Latvia2 Norway2

Mathematical modelling1 Proteomics1 Python1 Fermentation1 Escherichia coli1 Dynamic modelling1 Systems Biology1 Microbiology Biochemistry Molecular biology Genetics Enzymology Synthetic biology Regulatory metabolic networks1 Metabolic Engineering1 Kinetic modelling1 optimization1 Parameter estimation1 More...

Copasi2 COBRA toolbox2 Proteomics1 SBML1 Python1 continuous cultivation1 Computational Systems Biology1 Maxquant1 SILAC1 cobrapy toolbox1 More...