Experimental approaches to study the mechanism and ions involved in potassium uptake after long term potassium starvation.
SEEK ID: https://fairdomhub.org/investigations/19
Projects: TRANSLUCENT
Investigation position:
Export PNG
Views: 2484
Created: 3rd Jun 2010 at 09:54
Last updated: 22nd Nov 2011 at 19:12
This item has not yet been tagged.
Related items
Projects: TRANSLUCENT
Institutions: Humboldt-Universität zu Berlin
Expertise: Bioinformatics, Data Management
I created this for all SysMo Modellers
http://www.semanticsbml.org/aym Annotate Your Model
There you can annotate your non SBML models with biological terms (MIRIAM annotations). As a cool extra you can view you model source code with inserted biological infomation.
Together with this http://www.semanticsbml.org/semanticSBML you can serach for similar BioModels. The similarity search is based on MIRIAM annotations that are attached to you model. AYM also allows you to create annotations without ...
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
Gene interaction networks and models of cation homeostasis in Saccharomyces cerevisiae
Programme: SysMO
Public web page: http://www.translucent-network.org/
Organisms: Saccharomyces cerevisiae
How does the flux of potassium, hydrogen change during potassium uptake? Which ions are involved in maintaining the required charge balance?
Submitter: Falko Krause
Investigation: Potassium uptake in Saccharomyces cerevisiae
Assays: Additional fluxes, Potassium fluxes, Proton fluxes
Snapshots: No snapshots
How does the transport of potassium and hydrogen ions effect the concentrations in the near surrounding of the cell.
Submitter: Falko Krause
Investigation: Potassium uptake in Saccharomyces cerevisiae
Assays: Potassium changes, Proton changes
Snapshots: No snapshots
The potassium influx after the addition of a certain amount of KCl to a potassium free medium, followed by the injection of glucose will be measured by using the MIFE and FLISE technique. This reveals a time course of potassium. Also the external potassium concentrations will be measured.
Submitter: Falko Krause
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Potassium uptake in Saccharomyces cerevisiae
In parallel with the potassium influx the efflux of protons is monitored by measuring the external proton concentration changes with MIFE or FLISE.
Submitter: Falko Krause
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Potassium uptake in Saccharomyces cerevisiae
Further fluxes (ammonium, chloride, calcium) will be measured dependent on the capacities of the MIFE/FLISE technique.
Submitter: Falko Krause
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Potassium uptake in Saccharomyces cerevisiae
The external potassium changes will be monitored by the MIFE and FLISE technique. This allows an estimation of internal potassium changes by determining an initial concentration.
Submitter: Falko Krause
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Potassium uptake in Saccharomyces cerevisiae
The external pH changes will be monitored by the MIFE and FLISE technique. This allows an estimation of internal pH changes by determining an initial pH. pH changes will be also determined by using green fluorescent protein dyes. Relating the proton efflux and the change of internal pH allows an estimate of the proton buffering capacity.
Submitter: Falko Krause
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Potassium uptake in Saccharomyces cerevisiae