Representation of all prepared 2D PAGE analyses of cytosolic proteins of Clostridium acetobutylicum growing continuously at pH 5.5, 5.3, 5.1, 4.9 and 4.7.
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Created: 15th Nov 2010 at 12:07
Last updated: 15th Nov 2010 at 12:07
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Version 1 (earliest) Created 15th Nov 2010 at 12:07 by Holger Janssen
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Projects: COSMIC
Institutions: University of Rostock
Expertise: Microbiology, Biotechnology
Tools: Transcriptomics, Fermentation, Proteomics (2D-PAGE), Gaschromatographic analysis
PhD University of Rostock, Germany Institute of Biological Sciences Division of Microbiology Albert-Einstein-Str. 3 18051 Rostock
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
Systems Biology of Clostridium acetobutylicum - a possible answer to dwindling crude oil reserves
Programme: SysMO
Public web page: http://www.sysmo.net/index.php?index=54
Organisms: Clostridium acetobutylicum
Submitter: Christina Döring
Studies: Effect of pH on the metabolome, Effect of pH on the proteome, Effect of pH upon the transcriptome, Identification of clusters of co-regulated and anti-regulated genes, Modelling the effect of pH on the metabolic shift
Assays: Comparison of the proteome between pH 5.7 (acidogenesis) and pH 4.5 (sol..., Comparison of the transcriptome between pH 5.7 (acidogenesis) and pH 4.5..., Comparison of the transcriptome between pH 5.8 (acidogenesis) and pH 4.5..., Identification of dynamically similar transcript profiles, Steady state study of the effect of gene regulation on yields of end-pro..., Study of the end products of the acidogenesis and solventogenesis pathways, Time-dependent simulations
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Submitter: Holger Janssen
Investigation: The effect of pH upon the metabolic shift in Cl...
Assays: Comparison of the proteome between pH 5.7 (acidogenesis) and pH 4.5 (sol...
Snapshots: No snapshots
Investigation of all steady state pH-values between pH 5.7 and 4.5 (pH 5.5, 5.3, 5.1, 4.9, 4.7).
Submitter: Sara Jabbari
Assay type: Proteomics
Technology type: Technology Type
Investigation: The effect of pH upon the metabolic shift in Cl...
Study: Effect of pH on the proteome
Organisms: Clostridium acetobutylicum : ATCC824 (wild-type / wild-type)
SOPs: Standard operating procedure to analyze the int...
Data files: Proteome Reference maps of Clostridium acetobuy..., Proteome of Clostridium acetobutylicum growing ...
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Date Published: 1st Feb 2013
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