input/Prioritization_nonfilteredRBB/input/NODES.txt Version 1
_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_DiNAR/_A_PIS_NbL35-DiNAR/
SEEK ID: https://fairdomhub.org/data_files/5406?version=1
Filename:
input/Prioritization_nonfilteredRBB/input/NODES.txt
Format: Plain text document
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4CLL NbL16g05720 4CLL NbL01g24250 4CLL NbL01g24240 4CLL NbL11g15070 4CLL NbL11g15060 4CLL NbL17g10310 4CLL NbL07g21940 4CLL NbL01g01620 AAO NbL04g00980 AAO NbL07g08900 AAO NbL14g28190 AAO NbL07g08880 ACH NbL09g05050 ACH NbL19g03680 ACH NbL04g23360 ACH NbL18g22640 ACH NbL14g31500 ACH NbL04g06640 ACO NbL12g05530 ACO NbL14g04080 ACO NbL19g16000 ACO NbL02g28260 ACO NbL10g03910 ACO NbL11g20670 ACO NbL03g22830 ACO NbL02g12270 ACO NbL02g12260 ACO NbL02g28250 ACO NbL10g03920 ACO NbL12g05520 ACO NbL03g09970 ACO NbL13g09550 ACO NbL13g22890 ACO NbL13g09540 ACO NbL03g24810 ACO NbL11g24930 ACO NbL11g24920 ACS1,2,6 NbL08g09550 ACS1,2,6 NbL17g33350 ACS1,2,6 NbL04g20330 ACS1,2,6 NbL17g33370 ACS1,2,6 NbL17g33380 ACS1,2,6 NbL10g28330 ACS1,2,6 NbL17g33360 ACS1,2,6 NbL13g00560 ACS1,2,6 NbL19g04230 ACS10 NbL10g26760 ACS10 NbL17g31760 ACS10 NbL10g26770 ACS12 NbL06g18000 ACS12 NbL16g21980 ACS4,5,8,9,11 NbL04g08440 ACS4,5,8,9,11 NbL02g08600 ACS4,5,8,9,11 NbL12g13530 ACS4,5,8,9,11 NbL14g17370 ACS4,5,8,9,11 NbL02g13140 ACS4,5,8,9,11 NbL03g15130 ACS4,5,8,9,11 NbL11g17840 ACS4,5,8,9,11 NbL12g07380 ACS7 NbL14g02740 ACS7 NbL11g25130 ACX1,5 NbL10g17950 ACX1,5 NbL15g12390 ACX2 NbL12g21820 ACX2 NbL02g01390 ACX3,6 NbL18g05560 ACX3,6 NbL01g10300 ACX3,6 NbL18g05570 ACX4 NbL13g11430 ACX4 NbL15g03330 ACX4 NbL13g11910 ADT NbL07g20160 ADT NbL09g19180 ADT NbL02g27800 ADT NbL19g15530 ADT NbL01g04300 ADT NbL17g11500 AGO1,5,7,10 NbL09g06750 AGO1,5,7,10 NbL18g24430 AGO1,5,7,10 NbL16g16120 AGO1,5,7,10 NbL06g12570 AGO1,5,7,10 NbL06g12590 AGO1,5,7,10 NbL09g06760 AGO1,5,7,10 NbL07g10590 AGO1,5,7,10 NbL17g15340 AGO1,5,7,10 NbL09g19310 AGO1,5,7,10 NbL18g28050 AGO1,5,7,10 NbL09g23130 AGO1,5,7,10 NbL04g11660 AGO1,5,7,10 NbL10g01400 AGO2,3 NbL12g12120 AGO4,6,8,9 NbL09g13630 AGO4,6,8,9 NbL04g01360 AGO4,6,8,9 NbL08g11260 AGO4,6,8,9 NbL18g09320 AGO4,6,8,9 NbL03g22810 AGO4,6,8,9 NbL17g26630 AGO4,6,8,9 NbL11g20740 AGO4,6,8,9 NbL16g14520 AOC NbL02g18750 AOC NbL02g18760 AOC NbL19g28700 AOC NbL19g28690 AOS NbL15g09660 AOS NbL17g11130 AOS NbL18g18320 AOS NbL08g02750 AOS NbL07g03600 AOS NbL07g03580 AOS NbL08g02760 AOS NbL18g18330 AOS NbL03g19640 AOX1 NbL17g21570 AOX1 NbL10g23270 AOX1 NbL13g02490 AOX2 NbL08g18790 APK NbL02g10730 APK NbL12g02450 APK NbL14g27040 APK NbL13g16640 APK NbL03g02600 APK NbL15g01020 APX1,2 NbL02g06280 APX1,2 NbL18g26830 APX1,2 NbL04g21860 APX1,2 NbL04g21850 APX1,2 NbL12g03140 APX1,2 NbL05g05650 APX3 NbL08g00700 APX3 NbL18g12260 APX3 NbL02g16740 APX3 NbL12g09670 APX4 NbL11g16060 APX4 NbL03g12940 APX6 NbL17g07860 APX6 NbL07g18370 APX-TS NbL13g20690 APX-TS NbL03g08950 ARF1..22 NbL18g15230 ARF1..22 NbL10g05120 ARF1..22 NbL18g08470 ARF1..22 NbL08g10500 ARF1..22 NbL10g29450 ARF1..22 NbL17g34390 ARF1..22 NbL06g05230 ARF1..22 NbL07g00430 ARF1..22 NbL01g26720 ARF1..22 NbL19g14620 ARF1..22 NbL19g14630 ARF3 NbL19g24650 ARF3 NbL02g24980 ARF4 NbL17g10440 ARF4 NbL07g21730 ARF4 NbL17g10430 ARF4 NbL07g21720 ARF4 NbL17g10450 ASK NbL08g05320 ASK NbL07g03040 ASK NbL18g12080 ASK NbL09g29080 ASK NbL01g20410 ASK NbL07g03030 ASK NbL01g20400 ATPB NbL14g10260 ATPB NbL03g05790 ATPB NbL03g05800 ATPB NbL01g18620 ATPB NbL11g00620 ATPB NbL19g28010 ATPB NbL03g05780 ATPB NbL11g00630 ATPB NbL01g18610 ATPB NbL07g22600 ATPB NbL14g05740 ATPB NbL15g05860 ATPB NbL06g11660 ATPB NbL09g09250 ATPB NbL05g03580 ATPB NbL11g17100 BG NbL16g20850 bHLH NbL08g25780 bHLH NbL18g03040 bHLH NbL17g32820 bHLH NbL10g25340 BRI1 NbL15g00040 BRL NbL15g21820 BRL NbL16g24600 BRL NbL13g14230 C19-GA2ox NbL18g04990 C19-GA2ox NbL15g15910 C19-GA2ox NbL14g19430 C19-GA2ox NbL14g19440 C19-GA2ox NbL12g13150 C19-GA2ox NbL02g22530 C19-GA2ox NbL05g13720 C19-GA2ox NbL05g13730 C19-GA2ox NbL01g07870 C19-GA2ox NbL05g11490 C19-GA2ox NbL15g26990 C19-GA2ox NbL14g25500 C19-GA2ox NbL07g06260 C19-GA2ox NbL15g27050 C19-GA2ox NbL01g07880 C19-GA2ox NbL15g27030 C19-GA2ox NbL15g27040 C19-GA2ox NbL14g13970 C19-GA2ox NbL15g27060 CAMTA NbL12g21410 CAMTA NbL04g11130 CAMTA NbL12g21420 CAMTA NbL04g11160 CAMTA NbL08g18800 CAMTA NbL04g11140 CAMTA NbL12g21430 CAMTA NbL04g11150 CAT1,2,3 NbL03g16380 CAT1,2,3 NbL17g29610 CAT1,2,3 NbL02g20520 CAT1,2,3 NbL12g10390 CAT1,2,3 NbL16g29980 CAT1,2,3 NbL02g03440 CAT1,2,3 NbL11g14960 CAT1,2,3 NbL02g03450 CAT1,2,3 NbL12g10380 CAT1,2,3 NbL02g20530 CAT1,2,3 NbL11g14950 CLH NbL13g08930 CLH NbL09g18710 CLH NbL19g15770 CLH NbL04g07600 CLH NbL09g18700 CLH NbL13g08940 CM NbL02g29810 CM NbL19g17760 CM NbL13g23270 CML42 NbL05g09640 CML42 NbL05g09630 CML42 NbL19g12170 CML42 NbL19g12160 CML42 NbL13g10590 CML42 NbL13g10580 CML42 NbL01g19070 CML42 NbL01g19060 COI1 NbL15g14960 COI1 NbL10g14460 COI1 NbL17g18960 COL NbL02g28850 CPK1 NbL13g15650 CPK1 NbL03g03250 CPK1 NbL16g06250 CPK1 NbL14g30820 CPK1 NbL04g06850 CPK1 NbL11g02780 CPK15 NbL04g17150 CPK15 NbL02g12420 CPK17 NbL19g02930 CPK17 NbL04g25510 CPK17 NbL01g00830 CPK17 NbL14g28830 CPK17 NbL04g01580 CPK17 NbL17g13290 CPK17 NbL04g25520 CPK17 NbL08g11330 CPK17 NbL18g09410 CPK2 NbL15g05460 CPK2 NbL09g24840 CPK20 NbL15g05280 CPK20 NbL09g29570 CPK20 NbL09g29560 CPK21 NbL09g20720 CPK21 NbL12g05290 CPK21 NbL04g17160 CPK29 NbL03g16950 CPK29 NbL17g30190 CPK29 NbL16g29590 CPK29 NbL02g03860 CPK29 NbL16g29600 CPK3 NbL16g08580 CPK4,5,6,11 NbL09g11610 CPK4,5,6,11 NbL00g02680 CPK4,5,6,11 NbL12g19930 CPK4,5,6,11 NbL10g09860 CPK4,5,6,11 NbL13g20640 CPK4,5,6,11 NbL12g19940 CPK4,5,6,11 NbL09g29390 CPK4,5,6,11 NbL01g19230 CPK4,5,6,11 NbL08g06240 CPK4,5,6,11 NbL18g11370 CPK4,5,6,11 NbL03g09010 CPK9 NbL15g24380 CPK9 NbL05g10870 CPK9 NbL18g20910 CPK9 NbL05g10880 CPS NbL09g17890 CPS NbL14g08950 CPS NbL14g25560 CRT1,2 NbL08g14730 CRT1,2 NbL18g13500 CRT1,2 NbL08g14720 CRT1,2 NbL18g13490 CRT3 NbL10g05660 CRT3 NbL10g10300 CRT3 NbL12g20430 CRT3 NbL12g13650 CRT3 NbL10g05670 CTR NbL11g16880 CTR NbL03g14130 CTR NbL05g03430 CTR NbL15g07290 CTR NbL09g24190 CTR NbL01g20600 CTR NbL11g04340 CTR NbL09g24200 CTR NbL19g12630 CTS NbL02g01570 CTS NbL12g21560 CUL NbL04g15910 CUL NbL09g21610 CUL NbL14g08530 CUL NbL09g18350 CUL NbL08g25460 CUL NbL02g09040 CUL NbL12g00980 CUL NbL18g02150 CUL NbL08g13500 CYP94 NbL04g03810 CYP94 NbL15g03400 CYP94 NbL19g07180 CYP94 NbL05g18240 CYP94 NbL11g03350 CYP94 NbL17g12200 CYP94 NbL01g22060 CYP94 NbL06g11440 CYP94 NbL06g11430 CYP94 NbL16g14980 CYP94 NbL05g22790 CYP94 NbL09g18970 CYP94 NbL19g21280 CYP94 NbL14g27350 CYP94 NbL04g07100 CYP94 NbL14g05090 CYP94 NbL02g32720 DNAJ NbL01g13870 DNAJ NbL11g09780 DNAJ NbL14g11590 DNAJ NbL03g06900 DNAJ NbL11g09770 DNAJ NbL02g25120 DNAJ NbL19g24540 DNAJ NbL03g24330 DNAJ NbL15g29060 DNAJ NbL05g08520 DNAJ NbL19g10630 DNAJ NbL14g11600 DXPS NbL09g22180 DXPS NbL04g14050 DXPS NbL16g02520 DXPS NbL16g02500 DXPS NbL05g25600 DXPS NbL04g14060 DXPS NbL17g05060 DXPS NbL10g20800 EBF NbL17g07780 EBF NbL07g18300 EBF NbL07g17110 EBF NbL14g01160 EBF NbL10g00840 EDF NbL13g27330 EDF NbL13g27320 EDF NbL01g17390 EDF NbL05g25270 EDF NbL03g06120 EDS1 NbL18g25440 EDS1 NbL18g25430 EDS5 NbL09g28720 EDS5 NbL08g01570 EDS5 NbL15g01250 EDS5 NbL18g13180 EIN2 NbL05g04980 EIN2 NbL05g04970 EIN2 NbL15g30150 EIN3(EIL1) NbL04g01110 EIN3(EIL1) NbL14g28410 EIN3(EIL1) NbL14g28400 EIN3(EIL1) NbL13g08620 EIN3(EIL1) NbL09g13850 EIN3(EIL1) NbL09g13840 EIN3(EIL1) NbL09g13830 EIN3(EIL1) NbL13g08630 EIN3(EIL1) NbL18g09400 EIN3(EIL1) NbL18g09390 EIN3(EIL1) NbL08g11320 EIN3(EIL1) NbL08g11310 EIN3(like) NbL01g01610 EIN3(like) NbL14g29300 EIN3(like) NbL12g21850 EIN3(like) NbL03g09720 EMS NbL16g21160 EMS NbL08g31930 EMS NbL18g01910 ERF098 NbL04g17820 ERF098 NbL11g04370 ERF098 NbL08g26620 ERF098 NbL04g03940 ERF098 NbL14g33720 ERF1,2 NbL04g03950 ERF1,2 NbL08g26630 ERF1,2 NbL14g33730 ERF1,2 NbL05g24340 ERF1,2 NbL16g06470 ERF1,2 NbL03g01810 ERF1,2 NbL10g12790 ERF1,2 NbL02g24830 ERF1,2 NbL04g17810 ERF1,2 NbL10g17620 ERF1,2 NbL10g17610 ERF1,2 NbL10g17600 ERF104 NbL10g13840 ERF104 NbL10g13830 ERF105 NbL06g18850 ERF105 NbL16g23010 ERF105 NbL16g23000 ERF105 NbL16g22980 ERF105 NbL16g22970 ERF105 NbL16g23040 ERF105 NbL16g23030 ERF105 NbL15g00170 ERF105 NbL15g00160 ERF105 NbL02g24820 ERF105 NbL12g27920 ERF13 NbL08g19690 ERF13 NbL13g07870 ERF13 NbL08g19720 ERF13 NbL13g07850 ERF13 NbL13g07860 ERF14,95,96 NbL04g17830 ERF15 NbL11g02390 ERF15 NbL16g01410 ERF15 NbL16g01420 ERF15 NbL11g02380 ERF1,2 NbL16g28100 ERF5,6 NbL10g17650 ERF5,6 NbL15g12630 ETR NbL05g13780 ETR NbL06g26580 ETR NbL05g13790 ETR NbL09g03460 ETR NbL09g03470 ETR NbL09g03480 ETR NbL06g26570 ETR NbL15g27150 ETR NbL18g04290 ETR NbL16g06550 ETR NbL05g24450 ETR NbL10g11500 ETR NbL12g18480 ETR NbL18g03690 ETR NbL05g24460 ETR NbL09g00220 ETR NbL08g28910 ETR NbL06g28670 ETR NbL08g28930 FLS2 NbL02g23020 FLS2 NbL02g23010 FLS2 NbL19g26890 FLS2 NbL12g02530 FLS2 NbL02g12610 GA20ox NbL16g21790 GA20ox NbL17g14130 GA20ox NbL07g09410 GA20ox NbL17g25190 GA20ox NbL08g08090 GA20ox NbL10g17560 GA20ox NbL07g09420 GA20ox NbL13g23910 GA20ox NbL09g03170 GA3ox NbL15g13250 GA3ox NbL06g29720 GAMYB NbL03g22570 GAMYB NbL11g19680 GAMYB NbL09g13730 GAMYB NbL13g08490 GAMYB NbL07g09150 GAMYB NbL17g14410 GID1a,b,c NbL14g08740 GID1a,b,c NbL09g18140 GID1a,b,c NbL02g08950 GID1a,b,c NbL18g02540 GID1a,b,c NbL18g02530 GID1a,b,c NbL18g10530 GID1a,b,c NbL08g12640 GID1a,b,c NbL18g10540 GPX NbL04g20110 GPX NbL04g20100 GPX NbL04g20090 GPX NbL15g13730 GPX NbL13g04220 GPX NbL13g08290 GPX NbL14g08870 GPX NbL08g25910 GPX NbL18g02920 GPX NbL17g32670 GPX NbL10g25570 GRAS2 NbL09g08740 GRAS2 NbL18g27400 GRAS2 NbL13g16680 GRAS2 NbL03g02560 GRAS2 NbL10g14850 GRAS2 NbL14g06860 GRAS2 NbL15g15740 GRAS2 NbL13g12100 GRAS2 NbL19g09050 GRAS2 NbL05g07020 GRAS2 NbL08g14430 GRX480 NbL03g24240 GRX480 NbL18g05480 GRX480 NbL05g22420 GSNO NbL04g04790 GSNO NbL14g32880 GSNO NbL04g04780 GSO NbL04g03240 GSO NbL14g30260 GSO NbL16g13770 GST NbL12g00730 GST NbL15g27260 GST NbL19g05540 GST NbL01g07810 GST NbL01g07790 GST NbL04g14370 GST NbL14g13920 GST NbL05g14050 GST NbL15g27250 GST NbL09g03450 GST NbL05g14020 GST NbL06g26640 GST NbL01g07780 GST NbL14g13930 GST NbL05g14040 GST NbL05g14060 GST NbL01g07800 GST NbL01g07770 GST NbL15g27270 GST NbL06g26630 GST NbL09g03440 GST NbL05g14030 GST NbL01g24330 GST NbL02g16130 GST NbL12g00740 GST NbL02g16120 HLS NbL18g05440 HMA NbL10g25610 HMA NbL17g32630 HMA NbL01g01200 HMA NbL17g32640 HMA NbL17g08400 HMA NbL10g25630 HMA NbL08g18760 HMA NbL18g17260 HMA NbL17g07280 HMA NbL07g17890 HMA NbL07g17910 HMA NbL02g21020 HMA NbL12g11380 HMA NbL12g05190 HMA NbL02g21010 HMA NbL05g21090 HMGR NbL03g15890 HMGR NbL17g29020 HMGR NbL12g11040 HMGR NbL02g20180 HMGR NbL02g12040 HMGR NbL12g11050 HMGR NbL02g20170 HMGR NbL02g20190 HSP17,18 NbL18g26530 HSP17,18 NbL09g08490 HSP17,18 NbL09g08480 HSP17,18 NbL18g26520 HSP17,18 NbL18g26510 HSP17,18 NbL09g08460 HSP17,18 NbL05g07760 HSP17,18 NbL01g26050 HSP17,18 NbL03g11960 HSP17,18 NbL09g08470 HSP17,18 NbL09g08450 HSP17,18 NbL06g22940 HSP17,18 NbL18g26500 HSP17,18 NbL18g26490 HSP17,18 NbL16g23320 HSP90 NbL07g09950 HSP90 NbL01g16780 HSP90 NbL11g07060 HSP90 NbL17g14750 HSP90 NbL03g21210 HSP90 NbL11g21660 HSP90 NbL04g11380 HSP90 NbL16g29780 HSP90 NbL02g03650 HSP90 NbL16g29790 HSP90 NbL02g03630 HSP90 NbL06g16610 HSP90 NbL16g08520 HSP90 NbL16g20320 HSP90 NbL06g16620 HSP90 NbL18g21560 HSP90 NbL09g04000 HSP90 NbL18g06090 HSP90 NbL01g09740 HSP90 NbL15g22320 HSP90 NbL18g06100 HSP90 NbL15g22330 HSP90 NbL11g24670 HSP90 NbL02g33260 HSP90 NbL02g33250 HSP90 NbL16g24190 HSP90 NbL18g21550 HSP90 NbL09g04010 HSP90 NbL01g09730 HSP90 NbL16g24180 HSP90 NbL19g14180 HSP90 NbL19g14170 IAA29 NbL09g10970 IAA29 NbL17g07980 IAA29 NbL07g18480 IAA29 NbL07g17330 IAA29 NbL16g31930 ICS NbL09g07710 ICS NbL18g25670 IEGT NbL11g22820 IEGT NbL13g26620 IEGT NbL13g26610 IEGT NbL19g13600 IEGT NbL01g06250 IEGT NbL14g00760 IEGT NbL13g18740 IEGT NbL14g20740 IEGT NbL01g23470 IEGT NbL13g18730 IEGT NbL14g20720 IEGT NbL08g04130 IEGT NbL17g28520 IEGT NbL17g28510 IEGT NbL08g04110 IEGT NbL08g04100 IEGT NbL08g04180 IEGT NbL17g28540 IEGT NbL01g25090 IEGT NbL08g04120 IEGT NbL15g20130 IEGT NbL15g20120 IEGT NbL08g04140 JAM1,2 NbL08g10470 JAM1,2 NbL08g10460 JAM1,2 NbL18g08440 JAM1,2 NbL18g08430 JAM1,2 NbL02g00760 JAM3 NbL14g09210 JAM3 NbL09g17580 JAR NbL14g12280 JAR NbL08g10010 JAR NbL10g24400 JAR NbL12g16370 JAR NbL10g15970 JAR NbL14g12270 JAR NbL18g07980 JAR NbL12g16360 JAR NbL10g24390 JAR NbL10g24370 JAR NbL10g24360 JAR NbL05g21960 JAR NbL11g19200 JAR NbL01g10720 JAR NbL11g19210 JAR NbL05g21950 JAZ1,2,5,6 NbL05g16340 JAZ1,2,5,6 NbL05g16330 JAZ1,2,5,6 NbL11g23530 JAZ1,2,5,6 NbL10g04700 JAZ1,2,5,6 NbL14g03310 JAZ1,2,5,6 NbL11g23540 JAZ1,2,5,6 NbL14g03320 JAZ1,2,5,6 NbL06g01260 JAZ1,2,5,6 NbL04g20950 JAZ3,4 NbL07g00230 JAZ3,4 NbL06g04960 JAZ3,4 NbL17g16560 JAZ3,4 NbL07g11920 JAZ3,4 NbL14g05300 JAZ3,4 NbL09g14880 JAZ7,8 NbL07g06170 JAZ7,8 NbL07g06160 JAZ7,8 NbL14g25530 JMT NbL03g18480 JMT NbL19g29560 JMT NbL02g11480 JMT NbL13g16560 JMT NbL15g16330 JMT NbL13g16550 KAO1,2 NbL13g07080 KAO1,2 NbL08g20730 KAO1,2 NbL08g20740 KAO1,2 NbL10g04510 KAT NbL08g28500 KAT NbL08g28510 KAT NbL10g04990 KAT NbL04g05200 KO NbL15g09510 KO NbL03g19900 KS NbL07g13220 KS NbL14g24740 KS NbL14g25570 KS NbL01g11300 LOX NbL06g01120 LOX NbL16g11180 LOX NbL06g01130 LOX NbL08g13400 LOX NbL14g23990 LOX NbL08g13430 LOX NbL08g13420 LOX NbL16g19850 LOX NbL06g16650 LOX NbL15g04590 LOX NbL09g22790 LOX NbL04g12660 LOX NbL14g22680 LOX NbL15g06280 LOX NbL15g06260 LOX NbL15g06290 LOX NbL14g22650 LOX NbL14g22640 LOX NbL06g01110 LOX NbL09g22780 LOX NbL04g12680 LOX NbL14g31360 LOX NbL04g06450 LOX NbL08g13410 LOX NbL14g23980 LOX NbL09g22770 LOX NbL04g12690 LOX NbL04g12670 LOX NbL19g06640 LOX NbL19g06630 LOX NbL02g20420 LOX NbL01g01660 LOX NbL01g01710 LRR NbL01g05390 LRR NbL16g34760 LRR NbL16g03780 LRR NbL15g17430 LRR NbL05g26520 LRR NbL19g25550 LRR NbL02g24230 LRR NbL10g10100 LRR NbL12g20240 LSD1 NbL12g12550 MAPKKK8,9,11 NbL08g18020 MAPKKK8,9,11 NbL18g16620 MAPKKK8,9,11 NbL11g20330 MAPKKK8,9,11 NbL03g21930 MES NbL04g08960 MES NbL08g03020 MES NbL04g08950 MES NbL14g17770 MES NbL08g03010 MES NbL08g02990 MES NbL18g18740 MES NbL12g08000 MES NbL12g07990 MFP NbL14g22210 MFP NbL02g32230 MFP NbL19g20650 MFP NbL13g19410 MFP NbL19g02520 MFP NbL04g24290 MFP NbL19g02530 MFP NbL04g24300 MFP NbL15g25870 MFP NbL05g12540 MFP NbL14g02130 MFP NbL07g14620 MFP NbL10g21930 MFP NbL17g19950 MFP NbL10g01900 MFP NbL10g21920 MKK3 NbL16g15670 MKK3 NbL06g12070 MKK3 NbL16g15660 MKK3 NbL06g12080 MKK6 NbL02g04120 MKK6 NbL16g29360 MKK6 NbL16g29350 MKS1 NbL13g05730 MKS1 NbL05g23980 MKS1 NbL13g21770 MOS NbL18g13870 MOS NbL08g15150 MOS NbL18g13860 MOS NbL08g15160 MOS NbL10g26580 MOS NbL07g01640 MOS NbL06g06380 MOS NbL05g20930 MOS NbL12g00480 MOS NbL05g20940 MOS NbL12g00490 MOS NbL14g19970 MOS NbL04g11880 MOS NbL14g23810 MOS NbL15g04480 MOS NbL08g14470 MOS NbL00g02480 MOS NbL00g02470 MOS NbL17g19270 MOS NbL06g22340 MPK13 NbL01g04090 MPK13 NbL17g11600 MPK3 NbL02g06270 MPK3 NbL12g03160 MPK3 NbL12g03150 MPK3 NbL02g06260 MPK4 NbL18g07440 MPK4 NbL08g09410 MPK4 NbL10g28220 MPK4 NbL17g33280 MPK4 NbL12g16580 MPK4 NbL10g16160 MPK6 NbL14g24980 MPK6 NbL18g22980 MPK6 NbL09g05330 MPK6 NbL19g14380 MPK6 NbL19g14400 MPK6 NbL19g14390 MYB113 NbL15g02680 MYB113 NbL15g02690 MYB44,70,73 NbL16g23880 MYB44,70,73 NbL16g23870 MYB44,70,73 NbL15g08380 MYB44,70,73 NbL15g09250 MYB44,70,73 NbL17g03960 MYB44,70,73 NbL06g23410 MYB44,70,73 NbL02g07810 MYB44,70,73 NbL12g25160 MYC NbL16g07500 MYC NbL13g01830 MYC NbL13g01820 MYC NbL07g06680 MYC NbL02g04990 NAC19,55,72 NbL15g25320 NAC19,55,72 NbL09g03280 NAC19,55,72 NbL09g03260 NADPH-oxidase NbL08g13740 NADPH-oxidase NbL08g13760 NADPH-oxidase NbL18g30310 NADPH-oxidase NbL08g13750 NADPH-oxidase NbL11g23320 NADPH-oxidase NbL05g16530 NADPH-oxidase NbL14g03390 NADPH-oxidase NbL10g04630 NADPH-oxidase NbL10g08570 NADPH-oxidase NbL12g20760 NADPH-oxidase NbL11g23330 NADPH-oxidase NbL05g16520 NADPH-oxidase NbL12g20770 NADPH-oxidase NbL17g33490 NADPH-oxidase NbL10g28490 NADPH-oxidase NbL10g28500 NADPH-oxidase NbL06g05470 NADPH-oxidase NbL07g00800 NADPH-oxidase NbL06g05480 NADPH-oxidase NbL09g14620 NADPH-oxidase NbL09g19840 NADPH-oxidase NbL01g03900 NADPH-oxidase NbL18g26920 NADPH-oxidase NbL09g19850 NADPH-oxidase NbL18g26910 NADPH-oxidase NbL01g03910 NAK NbL05g06950 NAK NbL19g08990 NDA NbL12g02250 NDA NbL19g04960 NDA NbL19g04970 NDA NbL19g23080 NDA NbL02g26230 NDB NbL03g23180 NDB NbL19g22760 NDB NbL02g26510 NDB NbL11g19240 NDB NbL03g23170 NDB NbL10g27010 NDB NbL11g19230 NDB NbL05g22130 NDB NbL05g22120 NDB NbL10g27030 NDB NbL10g27020 NDC NbL15g14890 NDC NbL10g14530 NDC NbL10g14540 NDR NbL09g02140 NDR NbL01g01960 NIK NbL13g19530 NIK NbL03g07390 NIK NbL01g12100 NIK NbL14g10880 NIK NbL03g06210 NIK NbL19g16770 NIK NbL02g28830 NIK NbL01g16900 NIK NbL01g16890 NPR NbL05g14540 NPR NbL11g24500 NPR NbL05g14610 NPR NbL15g19980 NPR NbL03g00210 NPR NbL19g13760 NPR NbL13g19250 NPR NbL09g27520 NPR NbL09g27130 NPR NbL12g12060 NPR NbL05g17460 NPR NbL11g22460 NPR NbL12g20530 NPR NbL10g08890 OBE NbL10g12590 OBE NbL10g12580 OBE NbL12g17250 OBE NbL03g21190 OBE NbL11g21670 OMR1 NbL01g19380 OMR1 NbL09g23990 OMR1 NbL15g02140 OMR1 NbL05g03980 OMR1 NbL15g07730 OMR1 NbL13g12860 OMR1 NbL09g24000 OPR NbL17g02560 OPR NbL17g02550 OPR NbL18g20170 OPR NbL19g28870 OPR NbL07g17560 OPR NbL16g32070 OPR NbL07g17550 OPR NbL16g32080 PA NbL02g01820 PA NbL12g21970 PAA NbL14g03190 PAA NbL10g02830 PAA NbL10g08440 PAD4 NbL12g05320 PAL NbL05g04940 PAL NbL15g30130 PAL NbL15g02600 PAL NbL13g12690 PAL NbL08g31120 PAL NbL13g12680 PAL NbL16g02870 PAL NbL15g02590 PAL NbL08g25200 PAL NbL16g21380 PAL NbL10g05600 PAL NbL12g24380 PAL NbL10g10340 PAL NbL12g24370 PAL NbL16g21370 PAL NbL10g10330 PBB NbL13g19640 PBB NbL01g21450 PBB NbL11g12500 PBB NbL03g07470 PBE NbL16g21060 PBE NbL12g24290 PBE NbL10g05580 PBE NbL10g10350 PPL NbL14g19230 PPL NbL04g10480 PR1 NbL17g27420 PR1 NbL01g20820 PR1 NbL08g00450 PR1 NbL08g00440 PR1 NbL08g00470 PR1 NbL08g00460 PR1 NbL17g27340 PR1 NbL09g27890 PR3 NbL09g29260 PR3 NbL01g20550 PR3 NbL07g02840 PR3 NbL12g06070 PR3 NbL06g21250 PR3 NbL02g20690 PR3 NbL01g20540 PR3 NbL09g29270 PR4 NbL08g11760 PR4 NbL08g11740 PR4 NbL18g09850 PR4 NbL08g11770 PR5 NbL03g19440 PR5 NbL13g06100 PSAK NbL15g13930 PSAK NbL14g25990 PSAK NbL02g06970 PSAK NbL02g06960 RANGAP NbL18g03130 RANGAP NbL08g25690 RANGAP NbL08g25680 RANGAP NbL09g22900 RANGAP NbL04g12880 RANGAP NbL04g12870 RAR1 NbL17g14140 RAR1 NbL07g09390 RBCL NbL14g05760 RBCL NbL14g05750 RBCL NbL06g11650 RBCL NbL04g06560 RBCL NbL02g08560 RBCL NbL16g04620 RBCL NbL02g27230 RBCL NbL05g14570 RBCL NbL11g12680 RBCL NbL15g05850 RBCL NbL02g19760 RBCS NbL07g15100 RBCS NbL05g19150 RBCS NbL04g15770 RBCS NbL04g15750 RBCS NbL14g16990 RBCS NbL14g16980 RBCS NbL02g18990 RBCS NbL02g19000 RBX NbL14g03160 RBX NbL10g04850 RBX NbL11g23750 RGA1,2 NbL16g02200 RGA1,2 NbL16g15270 RGA1,2 NbL16g15280 RGA1,2 NbL16g02220 RGA1,2 NbL12g17180 RGA1,2 NbL12g16870 RGA1,2 NbL05g08900 RGA1,2 NbL13g23410 RGA1,2 NbL05g24950 RGA1,2 NbL05g24940 RGA1,2 NbL05g24970 RGA1,2 NbL05g24960 RGA1,2 NbL06g11720 RGA1,2 NbL19g21000 RGA1,2 NbL17g17820 RGA1,2 NbL19g02230 RGA1,2 NbL12g00340 RGA1,2 NbL18g04790 RGA1,2 NbL14g15970 RGA1,2 NbL08g27730 RGA1,2 NbL12g16900 RGA1,2 NbL08g23900 RGA1,2 NbL15g15800 RH NbL14g12840 RH NbL10g24850 RH NbL17g24780 RH NbL01g20530 RIN4 NbL04g05620 RIN4 NbL09g16930 RIN4 NbL14g07610 RIN4 NbL14g32130 RPL17 NbL09g06490 RPL17 NbL14g12460 RPL17 NbL14g12450 RPL17 NbL06g11490 RPL17 NbL16g15030 RPL17 NbL18g24780 RPL17 NbL11g12930 RPL17 NbL07g15420 RPL17 NbL08g26010 RPL7 NbL09g01850 RPL7 NbL01g23690 RPL7 NbL10g22820 RPL7 NbL07g17000 RPL7 NbL14g04440 RPL7 NbL11g14260 RPL7 NbL17g20990 RPL7 NbL07g17010 RTE1 NbL18g16450 RTE1 NbL08g17850 RTE1 NbL10g19580 RTE1 NbL17g06190 RTE1 NbL17g06200 SAG101 NbL02g21820 SAG101 NbL12g09150 SAG101 NbL02g14710 SAG101 NbL12g12250 SAG12 NbL19g25180 SAG12 NbL02g24580 SAG12 NbL04g16290 SAG12 NbL19g15360 SAG12 NbL19g25120 SAG12 NbL19g25190 SAGT NbL07g05050 SAGT NbL13g03410 SAGT NbL13g03380 SAGT NbL13g03370 SAGT NbL14g09530 SAGT NbL13g03400 SAGT NbL14g09540 SAGT NbL13g03360 SAGT NbL02g05550 SAHH NbL18g00990 SAHH NbL08g30600 SAHH NbL08g30610 SAHH NbL12g15410 SAHH NbL10g15580 SAHH NbL18g00960 SAHH NbL16g14620 SAHH NbL12g15400 SAHH NbL06g11210 SAHH NbL18g00950 SAMC NbL04g19480 SAMC NbL02g00660 SAMC NbL15g18160 SAMS NbL19g02040 SAMS NbL19g02030 SAMS NbL04g24900 SAMS NbL15g16020 SAMS NbL10g15080 SAMS NbL09g23800 SAMS NbL09g23790 SAMS NbL15g08190 SAMS NbL15g08180 SAMS NbL05g04550 SAMS NbL05g04540 SAMS NbL01g19600 SAMS NbL01g19590 SAMS NbL13g12430 SAMS NbL18g14270 SAMS NbL18g14260 SAMS NbL15g06850 SAMS NbL14g21730 SAMS NbL04g24910 SAMS NbL08g15580 SEN4 NbL01g06370 SERK NbL13g25160 SERK NbL18g17030 SERK NbL03g12040 SERK NbL16g24960 SERK NbL15g21650 SERK NbL08g18500 SGT1 NbL16g19960 SGT1 NbL06g16410 SLY NbL15g08460 SLY NbL15g08450 SOD NbL09g22060 SOD NbL10g26670 SOD NbL17g31890 SOD NbL17g09960 SOD NbL15g15370 SOD NbL06g19690 SOD NbL10g14020 SOD NbL10g06260 SOD NbL07g04710 SOD NbL16g21360 SOD NbL12g24360 SOD NbL16g23360 SOD NbL06g19140 SOD NbL12g14420 SR1IP NbL08g25490 SR1IP NbL18g02230 SR1IP NbL14g08540 SR1IP NbL18g02220 SR1IP NbL09g18340 SR1IP NbL19g11630 SR1IP NbL19g11640 SR1IP NbL05g09700 SR1IP NbL04g05430 SR1IP NbL14g32350 SR1IP NbL02g09530 SR1IP NbL04g05440 SR1IP NbL02g08050 SR1IP NbL12g24920 SR1IP NbL12g07590 SR1IP NbL02g13400 SR1IP NbL02g08060 SR1IP NbL02g13390 TDX NbL07g00220 TDX NbL06g04940 TDX NbL06g04930 TGA1,4 NbL12g22250 TGA1,4 NbL13g16790 TGA1,4 NbL03g02470 TGA1,4 NbL03g12100 TGA1,4 NbL13g25280 TGA1,4 NbL04g19750 TGA1,4 NbL02g02020 TGA1,4 NbL12g22240 TGA1,4 NbL17g31020 TGA1,4 NbL18g24220 TGA2,5,6 NbL01g00820 TGA2,5,6 NbL17g13280 TGA2,5,6 NbL04g01590 TGA2,5,6 NbL09g26080 TGA2,5,6 NbL19g13020 TGA2,5,6 NbL14g28840 TGA3,7 NbL04g19740 TGA3,7 NbL13g25270 UPL1,2 NbL15g22690 UPL1,2 NbL16g23990 UPL1,2 NbL15g22710 UPL1,2 NbL11g17470 UPL1,2 NbL16g23830 UPL1,2 NbL15g22700 UPL3,4 NbL08g00670 UPL3,4 NbL18g12210 UPL3,4 NbL09g28990 UPL3,4 NbL01g20340 UPL3,4 NbL08g00680 UPL3,4 NbL01g20350 UPL3,4 NbL09g29000 UPL3,4 NbL15g30820 UPL3,4 NbL05g05590 UPL5 NbL10g12700 UPL5 NbL12g17100 UPL5 NbL16g00800 UPL5 NbL14g17180 UPL5 NbL12g17090 UPL5 NbL04g15890 UPL5 NbL14g17170 UPL5 NbL11g15010 UPL6,7 NbL14g19510 UPL6,7 NbL04g11040 UPL6,7 NbL15g07760 UPL6,7 NbL05g03960 VDAC1 NbL12g09010 VDAC1 NbL02g14570 VDAC1 NbL14g18510 VDAC1 NbL04g09870 VDAC1 NbL11g09510 VDAC1 NbL17g15060 VDAC1 NbL07g10310 VDAC1 NbL11g09520 VDAC1 NbL06g09770 WAK NbL19g10900 WAK NbL07g22770 WAK NbL19g10890 WAKL NbL05g00300 WAKL NbL05g04020 WAKL NbL05g04000 WAKL NbL05g07400 WAKL NbL15g07710 WD40 NbL06g14600 WRKY11,17 NbL13g03460 WRKY11,17 NbL01g23130 WRKY11,17 NbL01g10600 WRKY11,17 NbL01g23120 WRKY22 NbL14g12490 WRKY22 NbL10g24590 WRKY22 NbL18g07470 WRKY22 NbL08g09570 WRKY22 NbL06g16390 WRKY23 NbL10g14960 WRKY23 NbL08g23780 WRKY8,28 NbL15g27760 WRKY8,28 NbL06g26800 WRKY33 NbL05g09050 WRKY33 NbL19g11360 WRKY33 NbL05g09040 WRKY40 NbL06g06420 WRKY40 NbL09g01930 WRKY40 NbL17g04650 WRKY40 NbL07g01800 WRKY41 NbL17g34830 WRKY41 NbL10g28950 WRKY41 NbL18g08030 WRKY41 NbL08g10080 WRKY41 NbL12g16280 WRKY41 NbL13g00390 WRKY48 NbL14g19670 WRKY48 NbL04g10890 WRKY48 NbL15g15840 WRKY53 NbL16g08690 WRKY53 NbL17g34840 WRKY53 NbL16g08700 WRKY53 NbL10g15960 WRKY57 NbL01g15620 WRKY57 NbL11g08080 WRKY6 NbL19g15690 WRKY6 NbL02g27970 WRKY6 NbL12g05410 WRKY6 NbL11g20490 WRKY6 NbL02g12310 WRKY70 NbL13g11090 WRKY70 NbL05g09580 WRKY70 NbL19g11840 WRKY70 NbL06g19440 WRKY71 NbL19g26740 WRKY71 NbL02g23120 WRKY71 NbL05g15330 WRKY71 NbL09g03630 XDH NbL00g00360 XDH NbL01g02880 XDH NbL01g02900 XRN NbL12g13780 XRN NbL11g12660 XRN NbL10g05810 XRN NbL10g05800 XRN NbL17g31000 XRN NbL11g15320 XRN NbL01g24500
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Created: 11th Apr 2022 at 14:16
Last updated: 21st Sep 2022 at 10:45
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Version 1 (earliest) Created 11th Apr 2022 at 14:16 by Marko Petek
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https://orcid.org/0000-0003-3644-7827PhD in Biotechnology, Research Associate at Department of Biotechnology and Systems Biology, National Institute of Biology
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National Institute of Biology, Department of Biotechnology and Systems Biology projects
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato, _p_RNAinVAL, tst, tst2, Playground
Web page: http://www.nib.si/eng/index.php/departments/department-of-biotechnology-and-systems-biology
Advanced Projects list for this Data file with search and filtering
SUSPHIRE aims to provide a sustainable, low-cost biomanufacturing platform for the commercial production of insect pheromones.
Synthetic biology data management spreadsheet: https://fairdomhub.org/data_files/6036
Programme: NIBSys
Public web page: http://susphire.info/susphireproject/
Start date: 1st Apr 2018
End date: 30th Sep 2021
Advanced Investigations list for this Data file with search and filtering
Short Name: T21_SXPsysbio Title: Use a systems biology approach to identify regulatory bottlenecks in SxPv1 Description: Samples from SXPv1.0 plants as well as sister nulls (progeny from the original transgenic event in which the transgene has segregated) and wild type will be grown and leaf samples taken for RNA extraction and profiling of primary metabolites and volatiles (target pheromones as well as potential derivatives) (P1, P5). Phenotypic and GC-MS data will be obtained and analysed from ...
Submitter: Marko Petek
Studies: Investigation files, _S_P1_SPv10T0andT1, _S_P1_SPv10T2andT3, _S_P1_SPv1TransientExp, _S_P1_SxPAltAcTransferases, _S_P1_SxPv10vsSxP12, _S_P1_SxPv12T2, _S_P4_CoExpNetViz, _S_P4_DiNAR, _S_P4_GAtreat, _S_P4_SxP10-newG-DE, _S_P4_SxP10-oldG-DE, _S_P4_SxP1012-finalG, _S_P4_SxP12-newG-DE
Assays: _A_00_SxP_photos-phenotyping, _A_01_RNA1-RNAisol, _A_01_SxP_Data_Only-CoExp, _A_01_SxPv12_fastq-QC, _A_01_mapping-CLC, _A_01_toNewGenome-CLC-mapping, _A_02_FastQC-bioinfo, _A_02_Nb_datasets-CoExp, _A_02_SxPv12_mapping-CLC, _A_02_limmavoomDE-R, _A_02a_limmavoom-multim-R, _A_02a_limmavoomDEbylines-R, _A_02b_limmavoom-uniquem-R, _A_03_MapMan-visualisation, _A_03_NewGenome-MapMan, _A_03_SxPv12_limmavoom_DE-R, _A_03_mapping-CLC, _A_03a_mapping2-STAR, _A_04_GSEA-Stat, _A_04_MapManBINenrich-GSEA, _A_04_Mercator-bioinfo, _A_04_SxPv12_GeneSetEnrichment-RNAseg-GSEA, _A_05_DEstat-R, _A_05_Phenotype_analysis-Stat, _A_05_VOCcomp-Bioinfo, _A_05a_DEstat2-R, _A_05b_DElow-wt-R, _A_06_MapMan-bioinfo, _A_06_SxPv1-0_Illumina-Centrifuge, _A_07_NbAUSv1-0-InterPro, _A_07_transgenes-CLC, _A_CKN-DiNAR, _A_CKN_NbL35-DiNAR, _A_LeavesSxPv10vsv12-GCMS, _A_P4_v10v12-phenotyping, _A_PIS-DiNAR, _A_PIS-SxPv12-DiNAR, _A_PIS_NbL35-DiNAR, _A_RootsSxPv10vsv12-GCMS, _A_SP10T0Analysis-GCMS, _A_SP10T1Analysis-GCMS, _A_SPv10EaDActAnalysis-GCMS, _A_SPv10T2Analysis-GCMS, _A_SPv10T3Analysis-GCMS, _A_SPv10_phenotyping-Images, _A_SxPAlternativeAcetyltransferases-GCMS, _A_SxPv10vsv12-phenotyping, _A_SxPv12ScreeningT2-GCMS, _A_TransientSPv11andSPv12-GCMS, _I_T21_SXPsysbio-files, _S_P1_SPv10T0andT1-files, _S_P1_SPv10T2andT3-files, _S_P1_SPv1TransientExp-files, _S_P1_SxPAltAcTransferases-files, _S_P1_SxPv10vsSxP12-files, _S_P1_SxPv12T2-files, _S_P4_CoExpNetViz-files, _S_P4_DiNAR-files, _S_P4_GAtreat-files, _S_P4_SxP10-newG-DE-files, _S_P4_SxP10-oldG-DE-files, _S_P4_SxP1012-finalG-files, _S_P4_SxP12-newG-DE-files
Advanced Studies list for this Data file with search and filtering
Short Name: DiNAR Title: DiNAR analyses of SxP DE data Description: DiNAR visualisation of SxPv1.0 and SxPv1.2 expressoin data in either PIS or CKN networks. Raw Data: Principal investigator: Ĺ pela Baebler License: Creative Commons Attribution 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Marko Petek
Investigation: _I_T21_SXPsysbio
Assays: _A_CKN-DiNAR, _A_CKN_NbL35-DiNAR, _A_PIS-DiNAR, _A_PIS-SxPv12-DiNAR, _A_PIS_NbL35-DiNAR, _S_P4_DiNAR-files
Advanced Assays list for this Data file with search and filtering
Short Name: PIS_NbL35-DiNAR Assay Class: DRY Assay Type: DiNAR Title: DE genes of SxP v1.0 and v1.2 visualisation in DiNAR Description: As input, DE genes determined by contrasting phenotype groups without outliers were used. Mapping to Nb genome v3.5. Visualisatoin in PIS network. pISA Assay creation date: 2022-01-30 pISA Assay creator: Mojca Juteršek Phenodata: None Featuredata: Data:
Submitter: Marko Petek
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_T21_SXPsysbio
Study: _S_P4_DiNAR
