input/Prioritization_filteredRBB/input/NODES.txt Version 1
_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_DiNAR/_A_PIS_NbL35-DiNAR/
SEEK ID: https://fairdomhub.org/data_files/5404?version=1
Filename:
input/Prioritization_filteredRBB/input/NODES.txt
Format: Plain text document
Size: 18 KB
4CLL NbL01g24250 4CLL NbL01g24240 4CLL NbL11g15070 4CLL NbL11g15060 4CLL NbL17g10310 4CLL NbL07g21940 AAO NbL04g00980 AAO NbL07g08900 AAO NbL14g28190 AAO NbL07g08880 ACH NbL09g05050 ACH NbL19g03680 ACH NbL04g23360 ACH NbL18g22640 ACH NbL14g31500 ACH NbL04g06640 ACO NbL12g05530 ACO NbL14g04080 ACO NbL19g16000 ACO NbL02g28260 ACO NbL10g03910 ACO NbL11g20670 ACO NbL03g22830 ACO NbL02g12270 ACO NbL02g12260 ACO NbL02g28250 ACO NbL10g03920 ACO NbL12g05520 ACO NbL03g09970 ACO NbL13g09550 ACO NbL13g22890 ACO NbL13g09540 ACO NbL03g24810 ACO NbL11g24930 ACO NbL11g24920 ACS1,2,6 NbL08g09550 ACS1,2,6 NbL17g33350 ACS1,2,6 NbL04g20330 ACS1,2,6 NbL17g33370 ACS1,2,6 NbL17g33380 ACS1,2,6 NbL10g28330 ACS1,2,6 NbL17g33360 ACS1,2,6 NbL13g00560 ACS1,2,6 NbL19g04230 ACS10 NbL10g26760 ACS10 NbL17g31760 ACS10 NbL10g26770 ACS12 NbL06g18000 ACS12 NbL16g21980 ACS4,5,8,9,11 NbL04g08440 ACS4,5,8,9,11 NbL02g08600 ACS4,5,8,9,11 NbL12g13530 ACS4,5,8,9,11 NbL14g17370 ACS4,5,8,9,11 NbL02g13140 ACS4,5,8,9,11 NbL03g15130 ACS4,5,8,9,11 NbL12g07380 ACS7 NbL14g02740 ACS7 NbL11g25130 ACX1,5 NbL10g17950 ACX1,5 NbL15g12390 ACX2 NbL12g21820 ACX2 NbL02g01390 ACX3,6 NbL18g05560 ACX3,6 NbL01g10300 ACX3,6 NbL18g05570 ACX4 NbL13g11430 ACX4 NbL15g03330 ACX4 NbL13g11910 ADT NbL07g20160 ADT NbL09g19180 ADT NbL02g27800 ADT NbL19g15530 ADT NbL01g04300 ADT NbL17g11500 AGO1,5,7,10 NbL09g06750 AGO1,5,7,10 NbL18g24430 AGO1,5,7,10 NbL16g16120 AGO1,5,7,10 NbL06g12570 AGO1,5,7,10 NbL06g12590 AGO1,5,7,10 NbL09g06760 AGO1,5,7,10 NbL07g10590 AGO1,5,7,10 NbL17g15340 AGO1,5,7,10 NbL09g19310 AGO1,5,7,10 NbL18g28050 AGO1,5,7,10 NbL09g23130 AGO1,5,7,10 NbL04g11660 AGO1,5,7,10 NbL10g01400 AGO4,6,8,9 NbL09g13630 AGO4,6,8,9 NbL04g01360 AGO4,6,8,9 NbL08g11260 AGO4,6,8,9 NbL18g09320 AGO4,6,8,9 NbL03g22810 AGO4,6,8,9 NbL17g26630 AGO4,6,8,9 NbL11g20740 AGO4,6,8,9 NbL16g14520 AOC NbL02g18750 AOC NbL02g18760 AOC NbL19g28690 AOS NbL15g09660 AOS NbL17g11130 AOS NbL18g18320 AOS NbL08g02750 AOS NbL07g03600 AOS NbL18g18330 AOS NbL03g19640 AOX1 NbL17g21570 AOX1 NbL10g23270 AOX1 NbL13g02490 AOX2 NbL08g18790 APK NbL02g10730 APK NbL12g02450 APK NbL14g27040 APK NbL13g16640 APK NbL03g02600 APK NbL15g01020 APX1,2 NbL02g06280 APX1,2 NbL18g26830 APX1,2 NbL04g21860 APX1,2 NbL04g21850 APX1,2 NbL12g03140 APX1,2 NbL05g05650 APX3 NbL08g00700 APX3 NbL18g12260 APX3 NbL02g16740 APX4 NbL11g16060 APX4 NbL03g12940 APX6 NbL17g07860 APX6 NbL07g18370 APX-TS NbL13g20690 APX-TS NbL03g08950 ARF1..22 NbL18g15230 ARF1..22 NbL10g05120 ARF1..22 NbL10g29450 ARF1..22 NbL17g34390 ARF1..22 NbL06g05230 ARF1..22 NbL07g00430 ARF1..22 NbL01g26720 ARF3 NbL02g24980 ARF4 NbL17g10440 ARF4 NbL07g21730 ASK NbL08g05320 ASK NbL07g03040 ASK NbL18g12080 ASK NbL09g29080 ASK NbL01g20410 ASK NbL07g03030 ASK NbL01g20400 ATPB NbL14g10260 ATPB NbL03g05790 ATPB NbL01g18620 ATPB NbL11g00620 ATPB NbL19g28010 ATPB NbL03g05780 ATPB NbL11g00630 ATPB NbL01g18610 ATPB NbL07g22600 ATPB NbL14g05740 ATPB NbL15g05860 ATPB NbL06g11660 ATPB NbL09g09250 ATPB NbL05g03580 ATPB NbL11g17100 BRI1 NbL15g00040 BRL NbL15g21820 BRL NbL16g24600 BRL NbL13g14230 C19-GA2ox NbL14g19430 C19-GA2ox NbL14g19440 C19-GA2ox NbL12g13150 C19-GA2ox NbL02g22530 C19-GA2ox NbL05g13720 C19-GA2ox NbL05g13730 C19-GA2ox NbL01g07870 C19-GA2ox NbL05g11490 C19-GA2ox NbL15g26990 C19-GA2ox NbL14g25500 C19-GA2ox NbL15g27050 C19-GA2ox NbL14g13970 C19-GA2ox NbL15g27060 CAMTA NbL12g21420 CAMTA NbL12g21430 CAT1,2,3 NbL03g16380 CAT1,2,3 NbL17g29610 CAT1,2,3 NbL02g20520 CAT1,2,3 NbL12g10390 CAT1,2,3 NbL16g29980 CAT1,2,3 NbL02g03440 CAT1,2,3 NbL11g14960 CAT1,2,3 NbL02g03450 CAT1,2,3 NbL12g10380 CAT1,2,3 NbL02g20530 CAT1,2,3 NbL11g14950 CLH NbL13g08930 CLH NbL09g18710 CLH NbL19g15770 CLH NbL09g18700 CLH NbL13g08940 CM NbL02g29810 CM NbL19g17760 CM NbL13g23270 CML42 NbL05g09640 CML42 NbL05g09630 CML42 NbL19g12170 CML42 NbL19g12160 CML42 NbL13g10590 CML42 NbL13g10580 CML42 NbL01g19070 CML42 NbL01g19060 COI1 NbL15g14960 COI1 NbL10g14460 COI1 NbL17g18960 CPK1 NbL13g15650 CPK1 NbL03g03250 CPK1 NbL16g06250 CPK1 NbL14g30820 CPK1 NbL04g06850 CPK1 NbL11g02780 CPK15 NbL04g17150 CPK15 NbL02g12420 CPK17 NbL19g02930 CPK17 NbL04g25510 CPK17 NbL01g00830 CPK17 NbL14g28830 CPK17 NbL04g01580 CPK17 NbL17g13290 CPK17 NbL04g25520 CPK2 NbL15g05460 CPK2 NbL09g24840 CPK20 NbL15g05280 CPK20 NbL09g29570 CPK20 NbL09g29560 CPK21 NbL09g20720 CPK21 NbL12g05290 CPK21 NbL04g17160 CPK29 NbL03g16950 CPK29 NbL17g30190 CPK29 NbL16g29590 CPK29 NbL02g03860 CPK29 NbL16g29600 CPK3 NbL16g08580 CPK4,5,6,11 NbL09g11610 CPK4,5,6,11 NbL00g02680 CPK4,5,6,11 NbL12g19930 CPK4,5,6,11 NbL10g09860 CPK4,5,6,11 NbL13g20640 CPK4,5,6,11 NbL12g19940 CPK4,5,6,11 NbL09g29390 CPK4,5,6,11 NbL01g19230 CPK4,5,6,11 NbL08g06240 CPK4,5,6,11 NbL18g11370 CPK4,5,6,11 NbL03g09010 CPK9 NbL15g24380 CPK9 NbL05g10870 CPK9 NbL18g20910 CPK9 NbL05g10880 CPS NbL09g17890 CPS NbL14g25560 CRT1,2 NbL08g14730 CRT1,2 NbL18g13500 CRT1,2 NbL08g14720 CRT1,2 NbL18g13490 CRT3 NbL10g05660 CRT3 NbL10g10300 CRT3 NbL12g20430 CRT3 NbL12g13650 CRT3 NbL10g05670 CTR NbL05g03430 CTR NbL15g07290 CTR NbL09g24190 CTR NbL01g20600 CTR NbL11g04340 CTR NbL09g24200 CTR NbL19g12630 CTS NbL02g01570 CTS NbL12g21560 CUL NbL04g15910 CUL NbL09g21610 CUL NbL14g08530 CUL NbL09g18350 CUL NbL08g25460 CUL NbL02g09040 CUL NbL12g00980 CUL NbL18g02150 CYP94 NbL15g03400 CYP94 NbL19g07180 CYP94 NbL05g18240 CYP94 NbL11g03350 CYP94 NbL01g22060 CYP94 NbL06g11440 CYP94 NbL06g11430 CYP94 NbL16g14980 CYP94 NbL14g27350 CYP94 NbL02g32720 DNAJ NbL01g13870 DNAJ NbL11g09780 DNAJ NbL14g11590 DNAJ NbL03g06900 DNAJ NbL02g25120 DNAJ NbL19g24540 DNAJ NbL03g24330 DNAJ NbL15g29060 DNAJ NbL05g08520 DNAJ NbL19g10630 DNAJ NbL14g11600 DXPS NbL09g22180 DXPS NbL04g14050 DXPS NbL16g02520 DXPS NbL16g02500 DXPS NbL05g25600 DXPS NbL04g14060 DXPS NbL17g05060 DXPS NbL10g20800 EBF NbL17g07780 EBF NbL07g18300 EBF NbL07g17110 EBF NbL14g01160 EBF NbL10g00840 EDF NbL13g27330 EDF NbL13g27320 EDF NbL01g17390 EDF NbL05g25270 EDF NbL03g06120 EDS5 NbL09g28720 EDS5 NbL08g01570 EDS5 NbL15g01250 EDS5 NbL18g13180 EIN2 NbL15g30150 EIN3(EIL1) NbL04g01110 EIN3(EIL1) NbL14g28410 EIN3(EIL1) NbL14g28400 EIN3(EIL1) NbL13g08620 EIN3(EIL1) NbL09g13850 EIN3(EIL1) NbL09g13840 EIN3(EIL1) NbL09g13830 EIN3(EIL1) NbL13g08630 EIN3(EIL1) NbL18g09400 EIN3(EIL1) NbL18g09390 EIN3(EIL1) NbL08g11320 EIN3(EIL1) NbL08g11310 EIN3(like) NbL01g01610 EIN3(like) NbL14g29300 EMS NbL16g21160 ERF098 NbL04g17820 ERF098 NbL11g04370 ERF098 NbL08g26620 ERF1,2 NbL04g03950 ERF1,2 NbL08g26630 ERF1,2 NbL14g33730 ERF1,2 NbL05g24340 ERF1,2 NbL02g24830 ERF105 NbL16g23010 ERF105 NbL16g23000 ERF105 NbL16g22980 ERF105 NbL16g22970 ERF14,95,96 NbL04g17830 ETR NbL05g13780 ETR NbL06g26580 ETR NbL05g13790 ETR NbL09g03460 ETR NbL09g03470 ETR NbL09g03480 ETR NbL06g26570 ETR NbL15g27150 ETR NbL18g04290 ETR NbL16g06550 ETR NbL05g24450 ETR NbL10g11500 ETR NbL12g18480 ETR NbL18g03690 ETR NbL05g24460 ETR NbL09g00220 ETR NbL06g28670 FLS2 NbL02g23020 FLS2 NbL19g26890 GA20ox NbL16g21790 GA20ox NbL17g14130 GA20ox NbL07g09410 GA20ox NbL17g25190 GA20ox NbL08g08090 GA20ox NbL07g09420 GA3ox NbL15g13250 GA3ox NbL06g29720 GID1a,b,c NbL14g08740 GID1a,b,c NbL09g18140 GID1a,b,c NbL02g08950 GID1a,b,c NbL18g02540 GID1a,b,c NbL18g02530 GID1a,b,c NbL18g10530 GID1a,b,c NbL08g12640 GID1a,b,c NbL18g10540 GPX NbL04g20110 GPX NbL04g20100 GPX NbL04g20090 GPX NbL15g13730 GPX NbL13g04220 GPX NbL13g08290 GPX NbL14g08870 GPX NbL08g25910 GPX NbL18g02920 GPX NbL17g32670 GRAS2 NbL18g27400 GRAS2 NbL13g16680 GRAS2 NbL03g02560 GRAS2 NbL14g06860 GRX480 NbL03g24240 GRX480 NbL18g05480 GRX480 NbL05g22420 GSNO NbL04g04790 GSNO NbL14g32880 GSO NbL04g03240 GSO NbL14g30260 GST NbL12g00730 GST NbL15g27260 GST NbL19g05540 GST NbL01g07810 GST NbL01g07790 GST NbL04g14370 GST NbL14g13920 GST NbL05g14050 GST NbL15g27250 GST NbL09g03450 GST NbL05g14020 GST NbL06g26640 GST NbL01g07780 GST NbL05g14040 GST NbL05g14060 GST NbL01g07800 GST NbL01g07770 GST NbL15g27270 GST NbL06g26630 GST NbL09g03440 GST NbL05g14030 GST NbL02g16130 GST NbL12g00740 GST NbL02g16120 HLS NbL18g05440 HMA NbL10g25610 HMA NbL17g32630 HMA NbL01g01200 HMA NbL17g32640 HMA NbL17g08400 HMA NbL10g25630 HMA NbL08g18760 HMA NbL18g17260 HMA NbL17g07280 HMA NbL07g17890 HMA NbL07g17910 HMA NbL02g21020 HMA NbL12g11380 HMA NbL12g05190 HMA NbL02g21010 HMA NbL05g21090 HMGR NbL03g15890 HMGR NbL17g29020 HMGR NbL12g11040 HMGR NbL02g20180 HMGR NbL02g12040 HMGR NbL12g11050 HMGR NbL02g20170 HMGR NbL02g20190 HSP17,18 NbL18g26530 HSP17,18 NbL09g08490 HSP17,18 NbL09g08480 HSP17,18 NbL18g26520 HSP17,18 NbL18g26510 HSP17,18 NbL09g08460 HSP17,18 NbL01g26050 HSP17,18 NbL09g08470 HSP17,18 NbL09g08450 HSP17,18 NbL06g22940 HSP17,18 NbL18g26500 HSP17,18 NbL18g26490 HSP90 NbL07g09950 HSP90 NbL01g16780 HSP90 NbL11g07060 HSP90 NbL03g21210 HSP90 NbL11g21660 HSP90 NbL04g11380 HSP90 NbL16g29780 HSP90 NbL02g03650 HSP90 NbL16g29790 HSP90 NbL02g03630 HSP90 NbL06g16610 HSP90 NbL16g08520 HSP90 NbL16g20320 HSP90 NbL06g16620 HSP90 NbL18g21560 HSP90 NbL09g04000 HSP90 NbL18g06090 HSP90 NbL01g09740 HSP90 NbL15g22320 HSP90 NbL18g06100 HSP90 NbL15g22330 HSP90 NbL11g24670 HSP90 NbL02g33260 HSP90 NbL02g33250 HSP90 NbL16g24190 HSP90 NbL18g21550 HSP90 NbL09g04010 HSP90 NbL01g09730 HSP90 NbL16g24180 HSP90 NbL19g14180 HSP90 NbL19g14170 ICS NbL09g07710 ICS NbL18g25670 IEGT NbL08g04130 IEGT NbL17g28520 IEGT NbL17g28510 IEGT NbL08g04110 IEGT NbL08g04100 IEGT NbL17g28540 IEGT NbL08g04140 JAM3 NbL14g09210 JAR NbL14g12280 JAR NbL08g10010 JAR NbL10g24400 JAR NbL12g16370 JAR NbL10g15970 JAR NbL14g12270 JAR NbL18g07980 JAR NbL12g16360 JAR NbL10g24390 JAR NbL10g24370 JAR NbL10g24360 JAR NbL05g21960 JAR NbL11g19200 JAR NbL11g19210 JAR NbL05g21950 JMT NbL19g29560 JMT NbL02g11480 KAO1,2 NbL13g07080 KAO1,2 NbL08g20730 KAO1,2 NbL08g20740 KAT NbL08g28500 KAT NbL08g28510 KAT NbL10g04990 KAT NbL04g05200 KO NbL15g09510 KO NbL03g19900 KS NbL07g13220 LOX NbL06g01120 LOX NbL16g11180 LOX NbL06g01130 LOX NbL08g13400 LOX NbL14g23990 LOX NbL08g13430 LOX NbL08g13420 LOX NbL16g19850 LOX NbL06g16650 LOX NbL15g04590 LOX NbL09g22790 LOX NbL14g22680 LOX NbL15g06280 LOX NbL15g06260 LOX NbL15g06290 LOX NbL14g22650 LOX NbL06g01110 LOX NbL09g22780 LOX NbL04g12680 LOX NbL08g13410 LOX NbL14g23980 LOX NbL09g22770 LOX NbL04g12690 LOX NbL04g12670 LOX NbL19g06640 LOX NbL19g06630 LOX NbL01g01660 LOX NbL01g01710 LRR NbL01g05390 LRR NbL16g34760 LRR NbL16g03780 LRR NbL15g17430 LRR NbL05g26520 LRR NbL19g25550 LRR NbL02g24230 LRR NbL10g10100 LRR NbL12g20240 MAPKKK8,9,11 NbL03g21930 MES NbL04g08960 MES NbL08g03020 MES NbL12g08000 MES NbL12g07990 MFP NbL14g22210 MFP NbL02g32230 MFP NbL19g20650 MFP NbL13g19410 MFP NbL19g02520 MFP NbL04g24290 MFP NbL15g25870 MFP NbL05g12540 MFP NbL14g02130 MFP NbL07g14620 MFP NbL10g21930 MFP NbL17g19950 MFP NbL10g01900 MFP NbL10g21920 MKK3 NbL16g15670 MKK3 NbL06g12070 MKK3 NbL16g15660 MKK3 NbL06g12080 MKK6 NbL02g04120 MKK6 NbL16g29360 MKK6 NbL16g29350 MOS NbL18g13870 MOS NbL08g15150 MOS NbL18g13860 MOS NbL08g15160 MOS NbL07g01640 MOS NbL05g20930 MOS NbL12g00480 MOS NbL05g20940 MOS NbL12g00490 MOS NbL14g19970 MOS NbL04g11880 MOS NbL14g23810 MOS NbL15g04480 MOS NbL08g14470 MOS NbL00g02480 MOS NbL00g02470 MOS NbL17g19270 MOS NbL06g22340 MPK13 NbL01g04090 MPK13 NbL17g11600 MPK3 NbL02g06270 MPK3 NbL12g03160 MPK3 NbL12g03150 MPK3 NbL02g06260 MPK4 NbL18g07440 MPK4 NbL08g09410 MPK4 NbL10g28220 MPK4 NbL17g33280 MPK4 NbL12g16580 MPK4 NbL10g16160 MPK6 NbL14g24980 MPK6 NbL18g22980 MPK6 NbL09g05330 MPK6 NbL19g14380 MPK6 NbL19g14400 MPK6 NbL19g14390 MYB113 NbL15g02680 NAC19,55,72 NbL15g25320 NAC19,55,72 NbL09g03280 NAC19,55,72 NbL09g03260 NADPH-oxidase NbL08g13740 NADPH-oxidase NbL08g13760 NADPH-oxidase NbL18g30310 NADPH-oxidase NbL08g13750 NADPH-oxidase NbL11g23320 NADPH-oxidase NbL05g16530 NADPH-oxidase NbL14g03390 NADPH-oxidase NbL10g04630 NADPH-oxidase NbL10g08570 NADPH-oxidase NbL12g20760 NADPH-oxidase NbL11g23330 NADPH-oxidase NbL05g16520 NADPH-oxidase NbL12g20770 NADPH-oxidase NbL17g33490 NADPH-oxidase NbL10g28490 NADPH-oxidase NbL10g28500 NADPH-oxidase NbL06g05470 NADPH-oxidase NbL07g00800 NADPH-oxidase NbL06g05480 NADPH-oxidase NbL09g14620 NADPH-oxidase NbL09g19840 NADPH-oxidase NbL01g03900 NADPH-oxidase NbL18g26920 NADPH-oxidase NbL09g19850 NADPH-oxidase NbL18g26910 NADPH-oxidase NbL01g03910 NAK NbL05g06950 NAK NbL19g08990 NDA NbL12g02250 NDA NbL19g04960 NDA NbL19g04970 NDA NbL19g23080 NDA NbL02g26230 NDB NbL03g23180 NDB NbL19g22760 NDB NbL02g26510 NDB NbL11g19240 NDB NbL03g23170 NDB NbL10g27010 NDB NbL11g19230 NDB NbL05g22130 NDB NbL05g22120 NDB NbL10g27030 NDC NbL15g14890 NDC NbL10g14530 NDC NbL10g14540 NIK NbL13g19530 NIK NbL03g07390 NIK NbL01g12100 NIK NbL14g10880 NIK NbL03g06210 NIK NbL19g16770 NIK NbL02g28830 NIK NbL01g16900 NIK NbL01g16890 NPR NbL05g14540 NPR NbL11g24500 NPR NbL15g19980 NPR NbL03g00210 NPR NbL19g13760 NPR NbL13g19250 NPR NbL09g27520 NPR NbL09g27130 NPR NbL12g12060 NPR NbL05g17460 NPR NbL11g22460 NPR NbL12g20530 NPR NbL10g08890 OBE NbL10g12590 OBE NbL10g12580 OBE NbL12g17250 OBE NbL03g21190 OBE NbL11g21670 OMR1 NbL01g19380 OMR1 NbL09g23990 OMR1 NbL15g02140 OMR1 NbL05g03980 OMR1 NbL15g07730 OMR1 NbL13g12860 OMR1 NbL09g24000 OPR NbL17g02560 OPR NbL17g02550 OPR NbL18g20170 OPR NbL07g17560 OPR NbL16g32070 OPR NbL07g17550 OPR NbL16g32080 PA NbL02g01820 PA NbL12g21970 PAA NbL14g03190 PAA NbL10g02830 PAA NbL10g08440 PAL NbL05g04940 PAL NbL15g30130 PAL NbL15g02600 PAL NbL13g12690 PAL NbL08g31120 PAL NbL13g12680 PAL NbL16g02870 PAL NbL15g02590 PAL NbL08g25200 PAL NbL16g21380 PAL NbL10g05600 PAL NbL12g24380 PAL NbL10g10340 PAL NbL12g24370 PAL NbL16g21370 PAL NbL10g10330 PBB NbL13g19640 PBB NbL01g21450 PBB NbL11g12500 PBB NbL03g07470 PBE NbL16g21060 PBE NbL12g24290 PBE NbL10g05580 PBE NbL10g10350 PPL NbL14g19230 PPL NbL04g10480 PR1 NbL17g27420 PR1 NbL01g20820 PR1 NbL08g00450 PR1 NbL08g00440 PR1 NbL08g00470 PR1 NbL08g00460 PR1 NbL17g27340 PR1 NbL09g27890 PR3 NbL09g29260 PR3 NbL01g20550 PR3 NbL07g02840 PR3 NbL12g06070 PR3 NbL06g21250 PR3 NbL02g20690 PR3 NbL01g20540 PR3 NbL09g29270 PR4 NbL08g11760 PR4 NbL08g11740 PR4 NbL18g09850 PR4 NbL08g11770 PR5 NbL03g19440 PSAK NbL15g13930 PSAK NbL14g25990 PSAK NbL02g06970 PSAK NbL02g06960 RANGAP NbL18g03130 RANGAP NbL08g25690 RANGAP NbL08g25680 RANGAP NbL09g22900 RANGAP NbL04g12880 RANGAP NbL04g12870 RAR1 NbL17g14140 RAR1 NbL07g09390 RBCL NbL14g05760 RBCL NbL14g05750 RBCL NbL06g11650 RBCL NbL02g08560 RBCL NbL16g04620 RBCL NbL02g27230 RBCL NbL05g14570 RBCL NbL11g12680 RBCL NbL15g05850 RBCS NbL07g15100 RBCS NbL05g19150 RBCS NbL04g15770 RBCS NbL04g15750 RBCS NbL14g16990 RBCS NbL14g16980 RBCS NbL02g18990 RBCS NbL02g19000 RBX NbL14g03160 RBX NbL10g04850 RGA1,2 NbL16g02200 RGA1,2 NbL16g15270 RGA1,2 NbL16g15280 RGA1,2 NbL05g24950 RGA1,2 NbL05g24940 RGA1,2 NbL05g24970 RGA1,2 NbL05g24960 RH NbL14g12840 RH NbL10g24850 RH NbL01g20530 RPL17 NbL09g06490 RPL17 NbL14g12460 RPL17 NbL14g12450 RPL17 NbL06g11490 RPL17 NbL16g15030 RPL17 NbL18g24780 RPL17 NbL11g12930 RPL17 NbL07g15420 RPL17 NbL08g26010 RPL7 NbL09g01850 RPL7 NbL01g23690 RPL7 NbL10g22820 RPL7 NbL07g17000 RPL7 NbL14g04440 RPL7 NbL11g14260 RPL7 NbL17g20990 RPL7 NbL07g17010 RTE1 NbL17g06200 SAG12 NbL19g25180 SAG12 NbL02g24580 SAG12 NbL04g16290 SAG12 NbL19g15360 SAGT NbL07g05050 SAHH NbL18g00990 SAHH NbL08g30600 SAHH NbL08g30610 SAHH NbL12g15410 SAHH NbL10g15580 SAHH NbL18g00960 SAHH NbL16g14620 SAHH NbL12g15400 SAHH NbL18g00950 SAMC NbL04g19480 SAMC NbL02g00660 SAMC NbL15g18160 SAMS NbL19g02040 SAMS NbL19g02030 SAMS NbL04g24900 SAMS NbL15g16020 SAMS NbL10g15080 SAMS NbL09g23800 SAMS NbL09g23790 SAMS NbL15g08190 SAMS NbL15g08180 SAMS NbL05g04550 SAMS NbL05g04540 SAMS NbL01g19600 SAMS NbL01g19590 SAMS NbL13g12430 SAMS NbL18g14270 SAMS NbL18g14260 SAMS NbL15g06850 SAMS NbL14g21730 SAMS NbL04g24910 SAMS NbL08g15580 SEN4 NbL01g06370 SERK NbL13g25160 SERK NbL18g17030 SERK NbL03g12040 SERK NbL16g24960 SERK NbL15g21650 SERK NbL08g18500 SGT1 NbL16g19960 SGT1 NbL06g16410 SOD NbL09g22060 SOD NbL10g26670 SOD NbL17g31890 SOD NbL17g09960 SOD NbL15g15370 SOD NbL06g19690 SOD NbL10g14020 SOD NbL10g06260 SOD NbL07g04710 SOD NbL16g21360 SOD NbL12g24360 SOD NbL16g23360 SOD NbL06g19140 SOD NbL12g14420 SR1IP NbL08g25490 SR1IP NbL18g02230 SR1IP NbL14g08540 SR1IP NbL18g02220 SR1IP NbL09g18340 SR1IP NbL19g11630 SR1IP NbL19g11640 SR1IP NbL05g09700 SR1IP NbL04g05430 SR1IP NbL14g32350 SR1IP NbL02g09530 SR1IP NbL04g05440 SR1IP NbL02g08050 SR1IP NbL12g24920 SR1IP NbL12g07590 SR1IP NbL02g13400 SR1IP NbL02g08060 SR1IP NbL02g13390 TDX NbL07g00220 TDX NbL06g04940 TDX NbL06g04930 TGA1,4 NbL12g22250 TGA1,4 NbL13g16790 TGA1,4 NbL03g02470 TGA1,4 NbL03g12100 TGA1,4 NbL13g25280 TGA1,4 NbL04g19750 TGA1,4 NbL02g02020 TGA1,4 NbL12g22240 TGA1,4 NbL17g31020 TGA1,4 NbL18g24220 TGA2,5,6 NbL01g00820 TGA2,5,6 NbL17g13280 TGA2,5,6 NbL04g01590 TGA2,5,6 NbL09g26080 TGA2,5,6 NbL19g13020 TGA2,5,6 NbL14g28840 TGA3,7 NbL04g19740 TGA3,7 NbL13g25270 UPL1,2 NbL15g22690 UPL1,2 NbL16g23990 UPL1,2 NbL15g22710 UPL1,2 NbL15g22700 UPL3,4 NbL08g00670 UPL3,4 NbL18g12210 UPL3,4 NbL09g28990 UPL3,4 NbL01g20340 UPL3,4 NbL08g00680 UPL3,4 NbL01g20350 UPL3,4 NbL09g29000 UPL5 NbL04g15890 UPL5 NbL14g17170 UPL5 NbL11g15010 UPL6,7 NbL14g19510 UPL6,7 NbL04g11040 UPL6,7 NbL15g07760 UPL6,7 NbL05g03960 VDAC1 NbL12g09010 VDAC1 NbL02g14570 VDAC1 NbL14g18510 VDAC1 NbL04g09870 VDAC1 NbL11g09510 VDAC1 NbL17g15060 VDAC1 NbL07g10310 VDAC1 NbL11g09520 WAKL NbL05g00300 WAKL NbL05g07400 WAKL NbL15g07710 WD40 NbL06g14600 WRKY33 NbL05g09050 WRKY33 NbL19g11360 WRKY57 NbL01g15620 XDH NbL00g00360 XDH NbL01g02880 XDH NbL01g02900 XRN NbL12g13780 XRN NbL11g12660 XRN NbL10g05810 XRN NbL17g31000 XRN NbL11g15320 XRN NbL01g24500
Export PNG
Creators and Submitter
Views: 1245 Downloads: 44
Created: 11th Apr 2022 at 14:16
Last updated: 21st Sep 2022 at 10:45
AttributionsNone
Version History
Version 1 (earliest) Created 11th Apr 2022 at 14:16 by Marko Petek
No revision comments
Related items
https://orcid.org/0000-0003-3644-7827PhD in Biotechnology, Research Associate at Department of Biotechnology and Systems Biology, National Institute of Biology
National Institute of Biology, Department of Biotechnology and Systems Biology projects
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato, _p_RNAinVAL, tst, tst2, Playground
Web page: http://www.nib.si/eng/index.php/departments/department-of-biotechnology-and-systems-biology
SUSPHIRE aims to provide a sustainable, low-cost biomanufacturing platform for the commercial production of insect pheromones.
Synthetic biology data management spreadsheet: https://fairdomhub.org/data_files/6036
Programme: NIBSys
Public web page: http://susphire.info/susphireproject/
Start date: 1st Apr 2018
End date: 30th Sep 2021
Short Name: T21_SXPsysbio Title: Use a systems biology approach to identify regulatory bottlenecks in SxPv1 Description: Samples from SXPv1.0 plants as well as sister nulls (progeny from the original transgenic event in which the transgene has segregated) and wild type will be grown and leaf samples taken for RNA extraction and profiling of primary metabolites and volatiles (target pheromones as well as potential derivatives) (P1, P5). Phenotypic and GC-MS data will be obtained and analysed from ...
Submitter: Marko Petek
Studies: Investigation files, _S_P1_SPv10T0andT1, _S_P1_SPv10T2andT3, _S_P1_SPv1TransientExp, _S_P1_SxPAltAcTransferases, _S_P1_SxPv10vsSxP12, _S_P1_SxPv12T2, _S_P4_CoExpNetViz, _S_P4_DiNAR, _S_P4_GAtreat, _S_P4_SxP10-newG-DE, _S_P4_SxP10-oldG-DE, _S_P4_SxP1012-finalG, _S_P4_SxP12-newG-DE
Assays: _A_00_SxP_photos-phenotyping, _A_01_RNA1-RNAisol, _A_01_SxP_Data_Only-CoExp, _A_01_SxPv12_fastq-QC, _A_01_mapping-CLC, _A_01_toNewGenome-CLC-mapping, _A_02_FastQC-bioinfo, _A_02_Nb_datasets-CoExp, _A_02_SxPv12_mapping-CLC, _A_02_limmavoomDE-R, _A_02a_limmavoom-multim-R, _A_02a_limmavoomDEbylines-R, _A_02b_limmavoom-uniquem-R, _A_03_MapMan-visualisation, _A_03_NewGenome-MapMan, _A_03_SxPv12_limmavoom_DE-R, _A_03_mapping-CLC, _A_03a_mapping2-STAR, _A_04_GSEA-Stat, _A_04_MapManBINenrich-GSEA, _A_04_Mercator-bioinfo, _A_04_SxPv12_GeneSetEnrichment-RNAseg-GSEA, _A_05_DEstat-R, _A_05_Phenotype_analysis-Stat, _A_05_VOCcomp-Bioinfo, _A_05a_DEstat2-R, _A_05b_DElow-wt-R, _A_06_MapMan-bioinfo, _A_06_SxPv1-0_Illumina-Centrifuge, _A_07_NbAUSv1-0-InterPro, _A_07_transgenes-CLC, _A_CKN-DiNAR, _A_CKN_NbL35-DiNAR, _A_LeavesSxPv10vsv12-GCMS, _A_P4_v10v12-phenotyping, _A_PIS-DiNAR, _A_PIS-SxPv12-DiNAR, _A_PIS_NbL35-DiNAR, _A_RootsSxPv10vsv12-GCMS, _A_SP10T0Analysis-GCMS, _A_SP10T1Analysis-GCMS, _A_SPv10EaDActAnalysis-GCMS, _A_SPv10T2Analysis-GCMS, _A_SPv10T3Analysis-GCMS, _A_SPv10_phenotyping-Images, _A_SxPAlternativeAcetyltransferases-GCMS, _A_SxPv10vsv12-phenotyping, _A_SxPv12ScreeningT2-GCMS, _A_TransientSPv11andSPv12-GCMS, _I_T21_SXPsysbio-files, _S_P1_SPv10T0andT1-files, _S_P1_SPv10T2andT3-files, _S_P1_SPv1TransientExp-files, _S_P1_SxPAltAcTransferases-files, _S_P1_SxPv10vsSxP12-files, _S_P1_SxPv12T2-files, _S_P4_CoExpNetViz-files, _S_P4_DiNAR-files, _S_P4_GAtreat-files, _S_P4_SxP10-newG-DE-files, _S_P4_SxP10-oldG-DE-files, _S_P4_SxP1012-finalG-files, _S_P4_SxP12-newG-DE-files
Short Name: DiNAR Title: DiNAR analyses of SxP DE data Description: DiNAR visualisation of SxPv1.0 and SxPv1.2 expressoin data in either PIS or CKN networks. Raw Data: Principal investigator: Ĺ pela Baebler License: Creative Commons Attribution 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Marko Petek
Investigation: _I_T21_SXPsysbio
Assays: _A_CKN-DiNAR, _A_CKN_NbL35-DiNAR, _A_PIS-DiNAR, _A_PIS-SxPv12-DiNAR, _A_PIS_NbL35-DiNAR, _S_P4_DiNAR-files
Short Name: PIS_NbL35-DiNAR Assay Class: DRY Assay Type: DiNAR Title: DE genes of SxP v1.0 and v1.2 visualisation in DiNAR Description: As input, DE genes determined by contrasting phenotype groups without outliers were used. Mapping to Nb genome v3.5. Visualisatoin in PIS network. pISA Assay creation date: 2022-01-30 pISA Assay creator: Mojca Juteršek Phenodata: None Featuredata: Data:
Submitter: Marko Petek
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_T21_SXPsysbio
Study: _S_P4_DiNAR
