Assays

What is an Assay?

1390 Assays visible to you, out of a total of 2397

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_scRNA-CITESEQ.docx

Data files: samples-publishMP_RSTR-D.SEQ.xlsx, samples-publishMP_RSTR-DNA.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:45, Last updated: 25th Feb 2025 at 20:39

CITESEQ Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_scRNA-CITESEQ.docx

Data files: samples-publishMP_RSTR-A.SCXP.xlsx, samples-publishMP_RSTR-D.SEQ.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:47, Last updated: 25th Feb 2025 at 20:39

Model Validation - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-241009-V1_TransCompR-Protocol.docx

Data files: samples-publishMP_RSTR-MDL.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:48, Last updated: 25th Feb 2025 at 20:39

Flow Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-220203-V1_Flow-protocol-for-SEEK.docx

Data files: samples-publishMP_RSTR-ABP.xlsx, samples-publishMP_RSTR-AB_FLOW.xlsx, samples-publishMP_RSTR-CEL.xlsx, samples-publishMP_RSTR-D.FCS.xlsx, samples-publishMP_RSTR-D.FLOW.xlsx, samples-publishMP_RSTR-TIS.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:41, Last updated: 25th Feb 2025 at 20:39

Flow Cytometry Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_Flow_Analysis.docx

Data files: samples-publishMP_RSTR-A.FLOW.xlsx, samples-publishMP_RSTR-D.FLOW.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:43, Last updated: 25th Feb 2025 at 20:39

Library Prep - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_scRNA-CITESEQ.docx

Data files: samples-publishMP_RSTR-DNA.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:44, Last updated: 25th Feb 2025 at 20:39

Pathogen Challenge and Antibody Depletion - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_Mice_SOP.docx

Data files: samples-publishMP_RSTR-AB_DEPL.xlsx, samples-publishMP_RSTR-BAC.xlsx, samples-publishMP_RSTR-MUS.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:38, Last updated: 25th Feb 2025 at 20:39

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240923-V1_RSTR_Mice_SOP.docx

Data files: samples-publishMP_RSTR-MUS.xlsx, samples-publishMP_RSTR-TIS.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:39, Last updated: 25th Feb 2025 at 20:39

Cell Isolation - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Comparable Non-canonical T cell responses are a...

Organisms: No organisms

SOPs: P.SAS-240827-V1_RSTR_BMDM_protocol.docx

Data files: samples-publishMP_RSTR-CEL.xlsx

Snapshots: No snapshots

Created: 19th Sep 2024 at 18:40, Last updated: 25th Feb 2025 at 20:39

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: All Metadata - Training Data.xlsx, All Metadata - Validation Data.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:37, Last updated: 5th Feb 2025 at 22:49

PCR: Validation Data - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241121-V1_qPCR-Protocol.docx

Data files: 111224_PCR.xlsx, samples-publish_KPRF_D.PCR.xlsx, samples-publish_KPRF_SAS_RNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:33, Last updated: 5th Feb 2025 at 22:46

Bacterial Survivability Restriction Assay: Validation Data - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_BSRA-Protocol.docx

Data files: 111224_BRSA.xlsx, samples-publish_KPRF_SAS_BAC.xlsx, samples-publish_KPRF_SAS_CEL.xlsx, samples-publish_KPRF_SAS_D.BSRA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:34, Last updated: 5th Feb 2025 at 22:44

TransCompR Cross Species Modeling - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_A.GEX.xlsx, samples-publish_KPRF_SAS_A.GEX.xlsx, samples-publish_TransCompR_MDL.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:37, Last updated: 5th Feb 2025 at 22:31

Gene Expression Analysis: Validation Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241121-V1_RNAseq-Analysis-Protocol.docx

Data files: samples-publish_KPRF_SAS_A.GEX.xlsx, samples-publish_KPRF_SAS_D.SEQ.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:36, Last updated: 5th Feb 2025 at 22:25

Short Read Sequencing: Validation Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_RNAseq-Protocol.docx

Data files: samples-publish_KPRF_SAS_D.SEQ.xlsx, samples-publish_KPRF_SAS_DNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:36, Last updated: 5th Feb 2025 at 21:48

Library Prep: Validation Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_RNAseq-Protocol.docx

Data files: samples-publish_KPRF_SAS_DNA.xlsx, samples-publish_KPRF_SAS_RNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:35, Last updated: 5th Feb 2025 at 20:46

RNA Extraction: Validation Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_RNAseq-Protocol.docx

Data files: samples-publish_KPRF_SAS_CEL.xlsx, samples-publish_KPRF_SAS_RNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:33, Last updated: 5th Feb 2025 at 20:00

Cell Extraction: Validation Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: P.SAS-241120-V1_Bacterial-culture-protocol.docx, P.SAS-241120-V1_Cell-culture-protocol.docx

Data files: samples-publish_KPRF_SAS_BAC.xlsx, samples-publish_KPRF_SAS_CEL.xlsx, samples-publish_KPRF_SAS_MUS.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:30, Last updated: 5th Feb 2025 at 19:47

Gene Expression Analysis: Training Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_A.GEX.xlsx, samples-publish_KPRF_D.SEQ.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:30, Last updated: 5th Feb 2025 at 19:29

Short Read Sequencing: Training Data - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_D.SEQ.xlsx, samples-publish_KPRF_DNA.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:29, Last updated: 5th Feb 2025 at 19:26

Library Prep: Training Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_DNA.xlsx, samples-publish_KPRF_RNA.xlsx, samples-publish_KPRF_TIS.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 18:28, Last updated: 5th Feb 2025 at 19:23

Tissue Collection: Training Data - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systems-level computational translation of mous...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_KPRF_BAC.xlsx, samples-publish_KPRF_MUS.xlsx, samples-publish_KPRF_PAT.xlsx, samples-publish_KPRF_PAV.xlsx, samples-publish_KPRF_TIS.xlsx

Snapshots: No snapshots

Created: 5th Feb 2025 at 17:09, Last updated: 5th Feb 2025 at 19:06

Digitally Barcoded Mtb Matrix Analysis - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: No SOPs

Data files: A.DBMM-ASIVBCG.xlsx, samples-publishAS-BCG_A.DBMM, samples-publishAS-BCG_D.SEQ

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:37, Last updated: 3rd Feb 2025 at 22:38

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: P.FOR-230503-V1_Barcoding_Amplicon_Feb2023

Data files: samples-publishAS-BCG_D.SEQ, samples-publishAS-BCG_DNA

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:35, Last updated: 3rd Feb 2025 at 22:36

Library Prep - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: P.FOR-230503-V1_Barcoding_Amplicon_Feb2023

Data files: samples-publishAS-BCG_BAC_extracted, samples-publishAS-BCG_DNA

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:23, Last updated: 3rd Feb 2025 at 22:27

Bacterial Extraction - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: P.FOR-231011_Bacterial Extraction

Data files: samples-publishAS-BCG_BAC_extracted, samples-publishAS-BCG_TIS.xlsx

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:22, Last updated: 3rd Feb 2025 at 22:20

PET-CT Scan - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: P.FLY-220823-V1_P---PET_CT_Imaging.docx

Data files: samples-publishAS-BCG_D.IMG.xlsx, samples-publishAS-BCG_PAV.xlsx

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:20, Last updated: 3rd Feb 2025 at 22:14

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: P.FLY-250203-V1_IVBCG-AS-NHP-Protocol.docx

Data files: samples-publishAS-BCG_PAV.xlsx, samples-publishAS-BCG_TIS.xlsx

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:18, Last updated: 3rd Feb 2025 at 21:55

Flow Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publishAS-BCG_TIS.xlsx

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:38, Last updated: 3rd Feb 2025 at 21:55

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Intravenous BCG-mediated protection against tub...

Organisms: No organisms

SOPs: P.FLY-250203-V1_IVBCG-AS-NHP-Protocol.docx

Data files: samples-publishAS-BCG_AB.xlsx, samples-publishAS-BCG_BAC.xlsx, samples-publishAS-BCG_NHP.xlsx, samples-publishAS-BCG_PAV.xlsx

Snapshots: No snapshots

Created: 23rd Jan 2025 at 20:17, Last updated: 3rd Feb 2025 at 21:24

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