D.SEQ
View samplesA sequencing file contains raw nucleotide sequence reads and their quality scores. It represents the digital output from a DNA or RNA sequencing run and serves as the starting point for downstream analyses such as alignment or variant calling. Typical file type: .fastq or .fastq.gz
Attributes
| Name | Type | Description | PID  | Unit |
|---|---|---|---|---|
| UID* | Text | Not specified | - | - |
| File_PrimaryData | Text | Not specified | - | - |
| Scientist | Text | Not specified | - | - |
| SampleCreationDate | Date | Not specified | - | - |
| Protocol | Text | Not specified | - | - |
| Link_PrimaryData | Text | Not specified | - | - |
| Checksum_PrimaryData | Text | Not specified | - | - |
| Parent | Text | Not specified | - | - |
| DataType | Text | Not specified | - | - |
| SequencingType | Text | Not specified | - | - |
| Sequencer | Text | Not specified | - | - |
| F_bp | Real number | Not specified | - | - |
| R_bp | Real number | Not specified | - | - |
| NumReads | Text | Not specified | - | - |
| LibraryStrategy | Text | Not specified | - | - |
| LibrarySource | Text | Not specified | - | - |
| LibrarySelection | Text | Not specified | - | - |
| ExtractedMolecule | Text | Not specified | - | - |
| LibraryDesign | Text | Not specified | - | - |
Tags
Not specified Creators and SubmitterViews: 709 Downloads: 27
Created: 25th Oct 2022 at 15:20
Last updated: 28th May 2026 at 13:31
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Related items
Projects: MIT SRP
Institutions: Massachusetts Institute of Technology
Projects: MIT SRP, Hi-IMPAcTB, MetNet, Endometriosis, Cancer Systems Biology Consortium (CSBC), Shoulders Lab, NExtSEEK Independent Projects
Web page: https://nextseek.mit.edu/
About
This project houses all the publicly available datasets generated by the Hi-IMPAcTB consortium over the course of its 7+ years.
What is Hi-IMPAcTB?
Hi-IMPAcTB is an ambitious endeavor bringing together a team of international, interdisciplinary researchers to improve our understanding of host-pathogen interactions in the context of tuberculosis (TB). Funded by a multi-center contract from the NIH, the long-term goal of the consortium is to enable principled vaccine design by improving ...
Programme: NExtSEEK
Public web page: https://grantome.com/grant/NIH/75N93019C00071-0-9999-1
