Assays

What is an Assay?

120 Assays visible to you, out of a total of 155

Imaging Analysis - Data Attached

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Personalized Vascularized Models of Breast Canc...

Organisms: No organisms

SOPs: No SOPs

Data files: Fig5b_Analysis_permeability_patients3and4.xlsx, Fig5c_Cell_death_4_patients.xlsx, samples-publish2024-03-22-D.IMG.xlsx

Snapshots: No snapshots

Created: 22nd Mar 2024 at 19:32, Last updated: 17th Jul 2024 at 19:44

Tumoroid Formation - Metadata

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Personalized Vascularized Models of Breast Canc...

Organisms: No organisms

SOPs: P.KAM-230131-V1_Cell-culture.docx, P.KAM-240321-V1_Vascularized-Tumoroid-Formation...

Data files: samples-publish2024-03-22-CEL.xlsx

Snapshots: No snapshots

Created: 22nd Mar 2024 at 19:30, Last updated: 17th Jul 2024 at 19:44

Device Creation - Metadata

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Personalized Vascularized Models of Breast Canc...

Organisms: No organisms

SOPs: P.KAM-240321-V1_MVN-Permeability-and-Fluid-Flow...

Data files: samples-publish2024-03-22-CEL.xlsx, samples-publish2024-03-22-OOC.xlsx

Snapshots: No snapshots

Created: 22nd Mar 2024 at 19:30, Last updated: 17th Jul 2024 at 19:44

Device Imaging - Metadata

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Personalized Vascularized Models of Breast Canc...

Organisms: No organisms

SOPs: P.KAM-240321-V1_MVN-Permeability-and-Fluid-Flow...

Data files: samples-publish2024-03-22-D.IMG.xlsx, samples-publish2024-03-22-OOC.xlsx

Snapshots: No snapshots

Created: 22nd Mar 2024 at 19:31, Last updated: 17th Jul 2024 at 19:44

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: No SOPs

Data files: CD4_AllMetadata.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 20:32, Last updated: 16th Jul 2024 at 20:49

PET-CT Scan - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: P.FLY-230523-V1_PET_CT_Imaging

Data files: samples-publishJB_CD4_D.IMG.xlsx, samples-publishJB_CD4_PAV.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:19, Last updated: 16th Jul 2024 at 20:49

Flow Cytometry Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publishJB_CD4_A.FLOW.xlsx, samples-publishJB_CD4_D.FLOW.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:18, Last updated: 16th Jul 2024 at 20:49

Flow Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: P.FLY-240716_V1_CD4_ICS_FlowCytometry.docx

Data files: samples-publishJB_CD4_AB.xlsx, samples-publishJB_CD4_ABP.xlsx, samples-publishJB_CD4_D.FLOW.xlsx, samples-publishJB_CD4_TIS.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:10, Last updated: 16th Jul 2024 at 20:49

Single Cell Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: P.FLY-240716_V1_CD4_scRNAseq.docx, P.SHA-220912-V1_Drop-seq_Alignment_Cookbook.pdf

Data files: samples-publishJB_CD4_A.SCXP.xlsx, samples-publishJB_CD4_D.SEQ.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:07, Last updated: 16th Jul 2024 at 20:48

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: P.FLY-240716_V1_CD4_scRNAseq.docx, P.FOR-230503-V1_Barcoding_Amplicon_Feb2023

Data files: samples-publishJB_CD4_D.SEQ.xlsx, samples-publishJB_CD4_D.SEQ.xlsx, samples-publishJB_CD4_DNA.xlsx, samples-publishJB_CD4_DNA.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:05, Last updated: 16th Jul 2024 at 20:48

Library Prep - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: P.FOR-230503-V1_Barcoding_Amplicon_Feb2023, P.SHA-220819-V1_SeqWellHughes.et.al.Master.Prot...

Data files: samples-publishJB_CD4_BAC.xlsx, samples-publishJB_CD4_DNA.xlsx, samples-publishJB_CD4_DNA.xlsx, samples-publishJB_CD4_TIS.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:05, Last updated: 16th Jul 2024 at 20:48

Bacterial Extraction - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: P.FOR-231011_Bacterial Extraction

Data files: samples-publishJB_CD4_BAC.xlsx, samples-publishJB_CD4_TIS.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:04, Last updated: 16th Jul 2024 at 20:48

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: P.FLY-210708-V1_Hannah's-GentleMacs-Protocol-as..., P.FLY-240716_V1_CD4_CFU_LibraryIdentification.docx, P.FLY-240716_V1_CD4_NX_Procedure.docx

Data files: samples-publishJB_CD4_PAV.xlsx, samples-publishJB_CD4_TIS.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:03, Last updated: 16th Jul 2024 at 20:48

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: P.FLY-240716_V1_CD4_NHPs.docx, P.FLY-240716_V1_CD4_NX_Procedure.docx

Data files: CD4-Depletion-Reinfection Study Design Graphic, samples-publishJB_CD4_AB.xlsx, samples-publishJB_CD4_BAC.xlsx, samples-publishJB_CD4_NHP.xlsx, samples-publishJB_CD4_PAV.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:02, Last updated: 16th Jul 2024 at 20:48

Digitally Barcoded Mtb Matrix Analysis - Data Attached

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD4+ T cells are homeostasis regulators during ...

Organisms: No organisms

SOPs: No SOPs

Data files: aCD4_cleaned_data_stats_circos, samples-publishJB_CD4_A.DBMM.xlsx, samples-publishJB_CD4_D.SEQ.xlsx

Snapshots: No snapshots

Created: 16th Jul 2024 at 17:09, Last updated: 16th Jul 2024 at 20:30

Bacterial Challenge - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish2024-06-04-BAC.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 19:20, Last updated: 6th Jun 2024 at 19:12

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: No SOPs

Data files: Fc-Engineered - All Metadata

Snapshots: No snapshots

Created: 5th Jun 2024 at 18:52, Last updated: 6th Jun 2024 at 19:12

Antibody-dependent NK Cell Activation - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240308-V1_Fc-engineering-ADNKA-Protocol-I...

Data files: samples-publish2024-06-04-AB.xlsx, samples-publish2024-06-04-CHM.xlsx, samples-publish2024-06-04-D.ADNKA.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 19:00, Last updated: 6th Jun 2024 at 19:12

Single Cell Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240411-V1_Fc-engineering-scRNAseq-Protoco...

Data files: samples-publish2024-06-04-A.SCXP.xlsx, samples-publish2024-06-04-DNA.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 19:04, Last updated: 6th Jun 2024 at 19:12

Single Cell Clustering Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240411-V1_Fc-engineering-scRNAseq-Protoco...

Data files: samples-publish2024-06-04-A.SCCL.xlsx, samples-publish2024-06-04-A.SCXP.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 19:05, Last updated: 6th Jun 2024 at 19:12

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish2024-06-04-PAT.xlsx, samples-publish2024-06-04-PAV.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 18:51, Last updated: 6th Jun 2024 at 19:12

Bacterial Survivability Restriction Assay - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240308-V1_Fc-engineering-BSRA-Protocol-Ir...

Data files: samples-publish2024-06-04-AB.xlsx, samples-publish2024-06-04-D.BSRA.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 18:58, Last updated: 6th Jun 2024 at 19:01

Antibody-dependent Neutrophil Phagocytosis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240308-V1_Fc-engineering-ADNP-Protocol-Ir...

Data files: samples-publish2024-06-04-AB.xlsx, samples-publish2024-06-04-D.ADNP.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 18:59, Last updated: 6th Jun 2024 at 19:01

Antibody-dependent Cellular Phagocytosis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240308-V1_Fc-engineering-ADCP-Protocol-Ir...

Data files: samples-publish2024-06-04-AB.xlsx, samples-publish2024-06-04-D.ADCP.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 19:01, Last updated: 6th Jun 2024 at 19:01

Antibody-dependent Complement Deposition - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240308-V1_Fc-engineering-ADCD-Protocol-Ir...

Data files: samples-publish2024-06-04-AB.xlsx, samples-publish2024-06-04-D.ADCD.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 19:02, Last updated: 6th Jun 2024 at 19:01

ELISA - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240308-V1_Fc-engineering-ELSA-Irvine.docx

Data files: samples-publish2024-06-04-AB.xlsx, samples-publish2024-06-04-CHM.xlsx, samples-publish2024-06-04-D.ELSA.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 18:56, Last updated: 6th Jun 2024 at 18:28

Luminex - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240308-V1_Fc-engineering-LMX-Protocol-Irv...

Data files: samples-publish2024-06-04-D.LMX.xlsx, samples-publish2024-06-04-TIS.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 18:55, Last updated: 6th Jun 2024 at 18:24

Library Prep - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240411-V1_Fc-engineering-scRNAseq-Protoco...

Data files: samples-publish2024-06-04-DNA.xlsx, samples-publish2024-06-04-TIS.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 18:54, Last updated: 6th Jun 2024 at 18:20

Tissue Extraction - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240308-V1_Fc-engineering-BSRA-Protocol-Ir...

Data files: samples-publish2024-06-04-AB.xlsx, samples-publish2024-06-04-BAC.xlsx, samples-publish2024-06-04-D.BSRA.xlsx, samples-publish2024-06-04-PAV.xlsx, samples-publish2024-06-04-TIS.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 18:51, Last updated: 6th Jun 2024 at 18:19

Device Imaging - Data Linked

MetNet

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MetNet

Study: Utilizing convolutional neural networks for dis...

Organisms: No organisms

SOPs: P.KAM-240227-V1_Image-Aquisiton-CNN.docx;

Data files: samples-publish2024-03-05-D.IMG.xlsx, samples-publish2024-03-05-OOC.xlsx

Snapshots: No snapshots

Created: 5th Mar 2024 at 18:50, Last updated: 6th Jun 2024 at 14:46

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