Model of the arabidopsis circadian clock obtained from the Bio-PEPA model. The model is based on Alexandra Pokhilko's 2010 deterministic model and includes a scaling factor omega to translate from continuous "concentrations" to discrete amounts. Light function is a smooth function switching between 0 and 1, and is parameterised in order to allow to automate experimentation with different light conditions and photoperiods.
Maria Luisa Guerriero, Alexandra Pokhilko, Aurora Piñas Fernández, Karen J. Halliday, Andrew J. Millar, and Jane Hillston (2011). Stochastic properties of the plant circadian clock. J. R. Soc. Interface. Retrieved from: http://rsif.royalsocietypublishing.org/content/early/2011/08/26/rsif.2011.0378.abstract
Originally submitted to PLaSMo on 2011-09-08 17:35:44
Created: 10th Jan 2019 at 17:38