samples-publish2023-11-03_CEL.xlsx
268 PE Cultured scEEOs
https://fairdomhub.org/sops/674
Uterus
Estradiol (1 nM) + Medroxyprogesterone acetate (500 nM)
Linda Griffith
Single Cell Endometrial Epithelial Organoids

Views: 113
Created: 3rd Nov 2023 at 18:47

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- People (1)
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- Assays (5)
- Data files (1)
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- Samples (1)
Projects: Hi-IMPAcTB, MIT SRP, MetNet, Endometriosis, Cancer Systems Biology Consortium (CSBC)
Institutions: Massachusetts Institute of Technology
Projects: MIT SRP, Hi-IMPAcTB, MetNet, Endometriosis, Cancer Systems Biology Consortium (CSBC)
Web page: https://nextseek.mit.edu/
Endometriosis research done by the Griffith lab (MIT) and the Goods lab (Dartmouth)
Programme: NExtSEEK
Public web page: Not specified
Organisms: Not specified
Submitter: Charles Demurjian
Studies: Integrating endometrial proteomic and single cell transcriptomic pipelin..., Organoid co-culture model of the cycling human endometrium in a fully-de...
Assays: All Metadata, All Metadata, Cell Culture Imaging - Data Linked, Cell Culture and Organoid Generation - Metadata, DNA Extraction - Metadata, DNA Extraction - Metadata, Elisa - Data Linked, Gene Expression Analysis - Data Linked, Immunohistochemistry - Data Linked, Linear Mixed Model - Data Linked, Luminex - Data Linked, Mass Spectrometry Proteomics - Data Linked, Mass Spectrometry Proteomics Analysis - Data Linked, Patient Visit - Metadata, Patient Visit - Metadata, Short Read Sequencing - Data Linked, Single Cell Expression Matrix Analysis - Data Linked, Single Cell Sequencing - Data Linked, Tissue Collection - Metadata, Tissue Collection - Metadata
Snapshots: No snapshots
Juan S. Gnecco, Alexander Brown, Kira Buttrey, Clara Ives, Brittany A. Goods, Lauren Baugh, Victor Hernandez-Gordillo, Megan Loring, Keith Isaacson, Linda G. Griffith
https://doi.org/10.1101/2021.09.30.462577
The human endometrium undergoes recurring cycles of growth, differentiation, and breakdown in response to sex hormones. Dysregulation of epithelial-stromal communication during hormone cycles is linked to myriad gynecological disorders for which treatments ...
Submitter: Charles Demurjian
Investigation: Endometriosis
Assays: All Metadata, Cell Culture Imaging - Data Linked, Cell Culture and Organoid Generation - Metadata, DNA Extraction - Metadata, Elisa - Data Linked, Gene Expression Analysis - Data Linked, Luminex - Data Linked, Patient Visit - Metadata, Short Read Sequencing - Data Linked, Tissue Collection - Metadata
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Endometriosis
Organisms: No organisms
SOPs: P.GRI-231030-V1_Cell_Culture_and_Organoid_Gener...
Data files: samples-publish2023-11-03_CEL.xlsx, samples-publish2023-11-03_TIS.xlsx
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Endometriosis
Organisms: No organisms
SOPs: P.GRI-231101-V1_RNA-isolation-and-bulk-RNA-seq
Data files: samples-publish2023-11-03_CEL.xlsx, samples-publish2023-11-03_DNA_2.xlsx
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Endometriosis
Organisms: No organisms
SOPs: P.GRI-231030-V4_Imaging_Protocol
Data files: samples-publish2023-11-03_AB_IMF.xlsx, samples-publish2023-11-03_CEL.xlsx, samples-publish2023-11-03_D.IMG_CCI.xlsx
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Endometriosis
Organisms: No organisms
SOPs: No SOPs
Data files: samples-publish2023-11-03_CEL.xlsx, samples-publish2023-11-03_D.LMX.xlsx
Snapshots: No snapshots
Submitter: Charles Demurjian
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: Endometriosis
Organisms: No organisms
SOPs: P.GRI-231103-V1_ELISA_Luminex_Protocol
Data files: samples-publish2023-11-03_CEL.xlsx, samples-publish2023-11-03_D.ELISA.xlsx
Snapshots: No snapshots
Batch sample publishing
Creator: Charles Demurjian
Submitter: Charles Demurjian
UID (Text) *, Name (Text) , Protocol (URI) , Source (Text) , Treatment (Text) , Parent (Registered Sample - TIS - GRI) , Scientist (Text) , Type (Text)
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