Sample types
What is a Sample type?Filters
UID (Text) *, File_PrimaryData (Text) , Link_PrimaryData (URI) , Type (Text) , Scientist (Text) , Protocol_Analysis (URI) , Protocol_Model (URI) , Parent (Text) , Model_Type (Text)
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A linear mixed model file contains statistical outputs from models that include both fixed and random effects. It represents results used to analyze complex datasets with repeated measures or hierarchical structure. Each file typically summarizes modeled results from multiple input datasets (many→1). Typical file types: .rds, .csv, .txt
UID (Text) *, File_PrimaryData (Text) , Link_PrimaryData (URI) , Scientist (Text) , Parent (Text) , Type (Text)
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UID (Text) *, File_PrimaryData (Text) , Link_PrimaryData (URI) , Parent (Text) , Scientist (Text) , Protocol (URI) , Type (Text) , Notes (Text) , Description (Text) , TrainingDatasets (Text) , AdditionalData (Text) , AdditionalData_Link (URI) , Repository (Text) , RepositoryLink (URI)
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An MDL file represents a model definition or machine learning output used for predictive analysis. It contains parameters, trained weights, or configuration metadata describing a computational model. Each file typically summarizes results from training on multiple datasets (many→1). Typical file types: .mdl, .json, .h5
UID (Text) *, File_PrimaryData (Text) , Link_PrimaryData (URI) , Scientist (Text) , Type (Text) , TrainingDatasets (URI) , ValidationDatasets (Text) , Protocol (URI)
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UID (Text) *, File_PrimaryData (Text) , Link_PrimaryData (URI) , Scientist (Text) , Parent (Text) , Notes (Text) , Protocol (Text) , Repository (Text) , RepositoryLink (Text)
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UID (Text) *, Name (Text) *, Scientist (Text) , Protocol (Text) , DateOfBirth (Date) , Sex (Text) , Genotype (Text) , StorageType (Text) , Treatment1Type (Text) , Treatment1 (Text) , Treatment1Route (Text) , Protocol_Treatment1 (Text) , Treatment2Type (Text) , Treatment2 (Text) , Treatment2Route (Text) , Protocol_Treatment2 (Text) , SacrificeDate (Date)
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A mouse sample represents an experimental animal used as a model system. Mice may be exposed to specific treatments or conditions, and tissues or cells are collected from them for downstream analysis.
UID (Text) *, Name (Text) *, Scientist (Text) *, Protocol (Text) , DateOfBirth (Date) , Sex (Text) , Strain (Text) , StrainReference (Text) , Genotype (Text) , Phenotype (Text) , StorageType (Text) , StorageLocation (Text) , StorageSite (Text) , Source (Text) , SourceFacility (Text) , ParentM (Text) , ParentF (Text) , Treatment1Type (Text) , Treatment1 (Text) , Treatment1Route (Text) , Protocol_Treatment1 (Text) , Treatment1Reference (Text) , Treatment1Dose (Real number) , Treatment1Units (Text) , Treatment1Time (Real number) , Treatment1TimeUnits (Text) , Treatment2Type (Text) , Treatment2 (Text) , Treatment2Route (Text) , Protocol_Treatment2 (Text) , Treatment2Reference (Text) , Treatment2Dose (Real number) , Treatment2Units (Text) , Treatment2Time (Real number) , Treatment2TimeUnits (Text) , SacrificeDate (Date) , Notes (Text) , Disease (Text) , DiseaseReference (Text) , DiseaseStage (Text)
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HRMS
UID (Text) *, Name (Text) , Scientist (Text) , DateOfBirth (Text) , Sex (Text) , Genotype (Text) , Notes (Text) , Lab (Text)
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UID (Text) *, Name (Text) , Scientist (Text) , DateOfBirth (Text) , Sex (Text) , Genotype (Text) , Notes (Text) , Cohort (Text) , SacrificeDate (Text) , Treatment1Type (Text) , Treatment1 (Text) , Treatment1Date (Text) , Treatment1Parent (Text) , Treatment1Route (Text) , Treatment1Dose (Text) , Treatment1DoseUnits (Text) , Treatment2Type (Text) , Treatment2 (Text) , Treatment2Date (Text) , Treatment2Parent (Text) , Treatment2Route (Text) , Treatment2Dose (Text) , Treatment2DoseUnits (Text) , Treatment3Type (Text) , Treatment3 (Text) , Treatment3Date (Text) , Treatment3Dose (Text) , Treatment3DoseUnits (Text) , AlternativeIDs (Text) , Protocol (URI)
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UID (Text) *, Name (Text) , Scientist (Text) , Protocol (Web link) , DateOfBirth (Text) , Sex (Text) , Genotype (Text) , StorageLocation (Text) , Cohort (Text) , SacrificeDate (Text) , Treatment1Type (Text) , Treatment1 (Text) , Treatment1Date (Text) , Treatment1Parent (Registered Sample - CHM - NIV) , Treatment1Route (Text) , Treatment1Dose (Text) , Treatment1DoseUnits (Text) , Treatment2Type (Text) , Treatment2 (Text) , Treatment2Date (Text) , Treatment2Parent (Registered Sample - CHM - NIV) , Treatment2Route (Text) , Treatment2Dose (Text) , Treatment2DoseUnits (Text)
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