Assays

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417 Assays visible to you, out of a total of 422

Tissue Collection

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:23, Last updated: 14th Sep 2026 at 17:04

Tissue Sectioning

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:23, Last updated: 14th Sep 2026 at 16:57

Chemical Challenge

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: P.ENG-260831-V1_AnimalsAndNDMATreatment.docx

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:23, Last updated: 14th Sep 2026 at 16:55

Imaging

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:23, Last updated: 14th Sep 2026 at 16:53

Tissue Imaging

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:23, Last updated: 14th Sep 2026 at 16:53

HistoPathology Analysis

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: P.ENG-260831-V1_HistologicalAnalysis.docx

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:24, Last updated: 14th Sep 2026 at 16:52

RaDR Image Machine Learning Analysis

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: P.ENG-260831-V1_RaDRImaging.docx

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:24, Last updated: 14th Sep 2026 at 16:52

γH2AX staining and analysis

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: P.ENG-260831-V1_GammaH2AXStaining.docx

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:24, Last updated: 14th Sep 2026 at 16:52

Cleaved caspase-3 staining and analysis

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: P.ENG-260831-V1_CleavedCaspase3Staining.docx

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:24, Last updated: 14th Sep 2026 at 16:52

GPT Assay

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: P.ENG-260831-V1_GptDeltaAssay

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 20:28, Last updated: 11th Sep 2026 at 18:13

Flow Cytometry

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: P.ENG-260831-V1_MicronucleusAssay.docx

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:23, Last updated: 11th Sep 2026 at 18:01

Flow Cytometry Analysis

MIT SRP

No description specified

Submitter: Juanita Pardo Sanchez

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Sex and base excision repair as key susceptibil...

Organisms: No organisms

SOPs: P.ENG-260831-V1_MicronucleusAssay.docx

Data files: No Data files

Snapshots: No snapshots

Created: 9th Sep 2026 at 16:24, Last updated: 11th Sep 2026 at 16:22

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Population-level genome sequencing reveals dist...

Organisms: No organisms

SOPs: No SOPs

Data files: MTB-SNP All Metadata.xlsx

Snapshots: No snapshots

Created: 1st Jul 2026 at 18:28, Last updated: 13th Jul 2026 at 23:10

Variant Calling Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Population-level genome sequencing reveals dist...

Organisms: No organisms

SOPs: P.FOR-260701-V1_MC-Sequencing+Analysis.docx

Data files: 1 hidden item

Snapshots: No snapshots

Created: 1st Jul 2026 at 18:28, Last updated: 13th Jul 2026 at 23:06

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Population-level genome sequencing reveals dist...

Organisms: No organisms

SOPs: P.FOR-260701-V1_MC-Sequencing+Analysis.docx

Data files: No Data files

Snapshots: No snapshots

Created: 1st Jul 2026 at 18:27, Last updated: 13th Jul 2026 at 19:45

Tissue Colleciton - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Population-level genome sequencing reveals dist...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 1st Jul 2026 at 18:26, Last updated: 13th Jul 2026 at 18:27

Bacterial Extraction - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Population-level genome sequencing reveals dist...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 1st Jul 2026 at 18:27, Last updated: 13th Jul 2026 at 18:27

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Population-level genome sequencing reveals dist...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 1st Jul 2026 at 18:26, Last updated: 13th Jul 2026 at 17:39

Library Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Population-level genome sequencing reveals dist...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 1st Jul 2026 at 18:27, Last updated: 13th Jul 2026 at 17:35

Mass Spectrometry Analysis - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 6th Jul 2026 at 14:08, Last updated: 6th Jul 2026 at 15:35

All Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: No SOPs

Data files: All_Metadata - NG Drinking Water.xlsx

Snapshots: No snapshots

Created: 9th Dec 2025 at 17:08, Last updated: 6th Jul 2026 at 15:23

RNA Extraction - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_8-GEX.docx

Data files: No Data files

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:58, Last updated: 6th Jul 2026 at 15:23

PCR - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_8-GEX.docx

Data files: No Data files

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:58, Last updated: 6th Jul 2026 at 15:23

DNA Extraction - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_6-DuplexDNA.docx

Data files: No Data files

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:58, Last updated: 6th Jul 2026 at 15:23

Library Prep - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_6-DuplexDNA.docx

Data files: No Data files

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:58, Last updated: 6th Jul 2026 at 15:23

Short Read Sequencing - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_6-DuplexDNA.docx

Data files: No Data files

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:58, Last updated: 6th Jul 2026 at 15:23

Mutational Spectra Analysis - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_6-DuplexDNA.docx, P.ESS-251028-V1_NG_7-NGS_Analysis

Data files: Musp_matrix-NG-drinkingwater.csv

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:58, Last updated: 6th Jul 2026 at 15:23

Tissue Collection - Metadata

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_1-Animals.docx

Data files: No Data files

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:57, Last updated: 6th Jul 2026 at 15:23

Mass Spectrometry - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_3-DNA_Adducts.docx

Data files: No Data files

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:58, Last updated: 6th Jul 2026 at 15:23

GPT Assay - Data Linked

MIT SRP

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: DNA adduct and mutational profiles reveal the s...

Organisms: No organisms

SOPs: P.ESS-251028-V1_NG_4-GPT.docx

Data files: No Data files

Snapshots: No snapshots

Created: 30th Oct 2025 at 14:58, Last updated: 6th Jul 2026 at 15:23

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