Peter Ruoff
Physical chemist with expertise in experimental kinetics, molecular biology, and mathematical modeling.
SEEK ID: https://fairdomhub.org/people/90
Location:
Norway
ORCID: Not specified
Joined: 28th Sep 2009
Expertise: biophysical chemistry, Kinetics
Tools: Perl, Matlab, quantitative western blot analyses, enzyme kinetics, madonna, fortran
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SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
Silicon cell model for the central carbohydrate metabolism of the archaeon Sulfolobus solfataricus under temperature variation
Programme: SysMO
Public web page: http://sulfosys.com/
MOSES (Micro Organism Systems biology: Energy and Saccharomyces cerevisiae) develops a new Systems Biology approach, which is called 'domino systems biology'. It uses this to unravel the role of cellular free energy ('ATP') in the control and regulation of cell function. MOSES operates though continuous iterations between partner groups through a new systems-biology driven data-management workflow. MOSES also tries to serve as a substrate for three or more other SYSMO programs.
Programme: SysMO
Public web page: http://www.moses.sys-bio.net/
The model describes the Entner-Doudoroff pathway in Sulfolobus solfataricus under temperature variation. The package contains source code written in FORTRAN as well as binaries for Mac OSX, Linux, and Windows. If compiling from source code, a FORTRAN compiler is required. On-line versions of the model are also available at: http://bioinfo.ux.uis.no/sulfosys http://jjj.biochem.sun.ac.za/sysmo/projects/Sulfo-Sys/index.html
Creator: Peter Ruoff
Submitter: Peter Ruoff
Model type: Ordinary differential equations (ODE)
Model format: Not specified
Environment: Not specified
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Abstract (Expand)
Authors: A. S. Figueiredo, T. Kouril, D. Esser, P. Haferkamp, P. Wieloch, D. Schomburg, P. Ruoff, B. Siebers, J. Schaber
Date Published: 12th Jul 2017
Publication Type: Not specified
Abstract (Expand)
Authors: Felix Bonowski, , , Jinda Holzwarth, Igor Kitanovic, Van Ngoc Bui, Elke Lederer,
Date Published: 23rd Dec 2009
Publication Type: Not specified
