Assays

What is an Assay?

18 Assays visible to you, out of a total of 20

Flow Cytometry – Data Linked

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Immune cells in bronchoalveolar lavage fluid of...

Organisms: No organisms

SOPs: P.BOO-210820-V1_Surface-staining-of-BAL-and-PBM..., P.BOO-211014-V1_User-Manual_231944_smxx.pdf

Data files: AB-samples-publish2023-03-30_20-15.xlsx, ABP-samples-publish2023-03-31_14-43.xlsx, D.FCS-samples-publish2023-05-19_15-43.xlsx, D.FLOW-samples-publish2023-05-19_15-39.xlsx, TIS-samples-publish2023-03-27_16-27.xlsx

Snapshots: No snapshots

Created: 18th Oct 2021 at 18:40, Last updated: 19th May 2023 at 20:44

Flow Cytometry Processing – Data Attached

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Immune cells in bronchoalveolar lavage fluid of...

Organisms: No organisms

SOPs: No SOPs

Data files: A.FLOW-flowcytometry_10.1371.journal.pone.02494..., A.FLOW-samples-publish2023-03-31_14-52.xlsx, D.FLOW-samples-publish2023-05-19_15-39.xlsx

Snapshots: No snapshots

Created: 18th Oct 2021 at 18:47, Last updated: 19th May 2023 at 20:41

Patient Visit – Metadata

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Immune cells in bronchoalveolar lavage fluid of...

Organisms: No organisms

SOPs: P.BOO-230324-V1_2016_Nov_04_Bronchoscopy_Protoc..., P.BOO-230324-V1_2018_June_Bronchoscopy_Protocol..., P.BOO-230324-V1_2019_April_Bronchoscopy_Protoco..., P.BOO-230324-V1_2020_Jan_Bronchoscopy_Protocol_..., P.BOO-230324-V1_KC_Protocol

Data files: PAT-samples-publish2023-03-27_16-07.xlsx, PAV-samples-publish2023-03-27_16-19.xlsx

Snapshots: Snapshot 1

Created: 18th Oct 2021 at 14:23, Last updated: 27th Mar 2023 at 21:38

Functional Assay – Metadata

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Robust IgM responses following intravenous vacc...

Organisms: No organisms

SOPs: P.ALT-211020-V1_LAM-ADCP-Protocol-EI.doc, P.ALT-211020-V1_LAM-ADNP-Protocol-EI.doc, P.ALT-211101-V1_LAM-ADNKA-Protocol-EI.doc

Data files: No Data files

Snapshots: No snapshots

Created: 27th Jan 2022 at 21:07, Last updated: 21st Apr 2022 at 18:18

Anti-Microbial Assay – Metadata

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Robust IgM responses following intravenous vacc...

Organisms: No organisms

SOPs: P.ALT-211119-V1_Mac-Live-Dead-Protocol-EI.docx, P.ALT-211119-V1_Mac-Lux-Opsonize-Protocol-EI.docx, P.ALT-211119-V1_Mac-Lux-Protocol-EI.docx

Data files: No Data files

Snapshots: No snapshots

Created: 27th Jan 2022 at 20:59, Last updated: 21st Apr 2022 at 18:18

Luminex Data Processing – Data Attached

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Robust IgM responses following intravenous vacc...

Organisms: No organisms

SOPs: P.ALT-220127-V1_EI-IV_BCG_PLS-DA_Statistics.docx

Data files: A.LMX-samples-publish2022-01-27_23-59.xlsx, D.FILE-220127ALT-1_Data_EI_IV_BCG_IgM_SystemsSe..., D.FILE-samples-publish2022-01-28_00-04.xlsx

Snapshots: No snapshots

Created: 27th Jan 2022 at 15:54, Last updated: 21st Apr 2022 at 18:17

Luminex Assay – Metadata

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Robust IgM responses following intravenous vacc...

Organisms: No organisms

SOPs: P.ALT-211020-V1_NHP-FcR-Luminex-Protocol-EI.doc, P.ALT-211020-V1_NHP-Isotype-Luminex-Protocol-EI..., P.ALT-211203-V1_BCG_study_EI_luminex_panel.xlsx

Snapshots: No snapshots

Created: 27th Jan 2022 at 15:54, Last updated: 21st Apr 2022 at 18:16

NHP Tissue Collection – Metadata

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Robust IgM responses following intravenous vacc...

Organisms: No organisms

SOPs: No SOPs

Data files: CEX-samples-publish2022-01-28_00-10.xlsx, NHP-samples-publish2022-01-28_00-20.xlsx

Snapshots: No snapshots

Created: 27th Jan 2022 at 15:52, Last updated: 21st Apr 2022 at 18:16

Single Cell Sequencing – Data Linked

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-FcγR interactions shift alveolar macrophage ...

Organisms: No organisms

SOPs: No SOPs

Data files: D.SEQ-samples-publish2022-03-25_04-01.xlsx

Snapshots: No snapshots

Created: 24th Mar 2022 at 19:56, Last updated: 21st Apr 2022 at 17:50

Single Cell Sequencing Analysis – Data Linked

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-FcγR interactions shift alveolar macrophage ...

Organisms: No organisms

SOPs: No SOPs

Data files: A.SCCLUST-samples-publish2022-04-08_05-10.xlsx, A.SCEXPR-samples-publish2022-04-08_05-07.xlsx

Snapshots: No snapshots

Created: 7th Apr 2022 at 21:03, Last updated: 21st Apr 2022 at 17:48

Tissue Extraction – Metadata

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-FcγR interactions shift alveolar macrophage ...

Organisms: No organisms

SOPs: No SOPs

Data files: MUS-samples-publish2022-03-15_01-19.xlsx, TIS-samples-publish2022-03-15_01-23.xlsx

Snapshots: No snapshots

Created: 14th Mar 2022 at 17:10, Last updated: 21st Apr 2022 at 17:47

RaDR Image Machine Learning Analysis – Data Attached

MIT SRP

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Excision of mutagenic replication-blocking lesi...

Organisms: No organisms

SOPs: No SOPs

Data files: A.IMG-samples-publish2021-12-13_22-22.xlsx, WAD_RaDR_roi_extraction_10.1016.j.celrep.2021.1..., samples-publish2021-03-30_16-04.xlsx

Snapshots: No snapshots

Created: 13th Dec 2021 at 14:19, Last updated: 10th Jan 2022 at 17:04

GPT Assay – Data Attached

MIT SRP

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Excision of mutagenic replication-blocking lesi...

Organisms: No organisms

SOPs: P.ESS-201123-V1_gpt-NextGen-Protocol.pdf

Data files: 10.1016.j.celrep.2021.108864_GPT_assay, D.GPT-samples-publish2021-12-13_23-22.xlsx

Snapshots: No snapshots

Created: 20th Sep 2021 at 13:55, Last updated: 10th Jan 2022 at 16:58

Tissue Imaging – Metadata

MIT SRP

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Excision of mutagenic replication-blocking lesi...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish2021-03-30_16-04.xlsx

Snapshots: No snapshots

Created: 29th Mar 2021 at 17:57, Last updated: 10th Jan 2022 at 16:49

Mouse Necropsy – Metadata

MIT SRP

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Excision of mutagenic replication-blocking lesi...

Organisms: No organisms

SOPs: P.ENG-200806-V2_Short-Term-Collection-at-Necrop..., P.ENG-201008-V1_Med-Term-Collection-at-Necropsy...

Data files: samples-publish2021-03-30_16-25.xlsx, samples-publish2021-03-30_17-38.xlsx, samples-publish2021-09-20_22-36.xlsx

Snapshots: No snapshots

Created: 29th Mar 2021 at 16:35, Last updated: 10th Jan 2022 at 16:47

Tissue Lysis – Metadata

MIT SRP

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Excision of mutagenic replication-blocking lesi...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish2021-03-30_17-07.xlsx

Snapshots: No snapshots

Created: 30th Mar 2021 at 16:57, Last updated: 10th Jan 2022 at 16:41

Mass Spectrometry – Data Linked

MIT SRP

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Excision of mutagenic replication-blocking lesi...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish2021-03-30_15-51.xlsx, samples-publish2021-03-30_17-07.xlsx

Snapshots: No snapshots

Created: 29th Mar 2021 at 18:00, Last updated: 10th Jan 2022 at 16:38

Mass Spectrometry Processing – Data Linked

MIT SRP

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: MIT SRP

Study: Excision of mutagenic replication-blocking lesi...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish2021-03-30_14-31.xlsx, samples-publish2021-03-30_15-51.xlsx

Snapshots: No snapshots

Created: 29th Mar 2021 at 18:00, Last updated: 10th Jan 2022 at 16:37

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