Dynamic shift model of the effect of pH upon solvent production by Clostridium acetobutylicum - third experiment
Version 1

LightningSimulate Model on JWS BuildDownload

An ODE model representing the metabolic network governing acid and solvent production by Clostridium acetobutylicum (Haus et al. BMC Systems Biology 2011, 5:10), incorporating the effect of pH upon gene regulation and subsequent end-product levels. This model describes the third of four experiments in which the pH of the culture was shifted. For this experiment acidogenesis at pH 5.7 was maintained for 121 hours, after which the pH control was stopped, allowing the natural metabolic shift to the production of the solvents to begin.

Simulation link for JWS Online: http://jjj.mib.ac.uk/webMathematica/Examples/run.jsp?modelName=haus3

FAIRDOMHub ID: https://fairdomhub.org/models/57?version=1

1 item is associated with this Model:
  • haus3.dat (uuencoded file - 2.5 KB) Download

Organism: Clostridium acetobutylicum

Model type: Ordinary differential equations (ODE)

Model format: Not specified

Execution or visualisation environment: JWS Online

Model image: No image specified

help Contributor and Creators
License
No license specified
Activity

Views: 1546   Downloads: 90

Created: 12th Oct 2011 at 12:05

Last updated: 7th Mar 2012 at 13:49

Last used: 19th Nov 2017 at 02:33

help Attributions

None

Related items

Powered by
Seek new full
(v.1.5.0)
Copyright © 2008 - 2017 The University of Manchester and HITS gGmbH