input/Prioritization_newScript/output/clades.organism.NGS.priority_MJU_p001.txt Version 1
_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_DiNAR/_A_CKN_NbL35-DiNAR/
SEEK ID: https://fairdomhub.org/data_files/5401?version=1
Filename:
input/Prioritization_newScript/output/clades.organism.NGS.priority_MJU_p001.txt
Format: Plain text document
Size: 455 KB
probeID clade LogFC_high10.wt LogFC_high12.wt LogFC_low.wt NbL16g03580 AT1G01020 NA NA NA NbL01g21270 AT1G01030 NA NA NA NbL05g23250 AT1G01040 NA NA NA NbL17g35120 AT1G01050 1.24 NA NA NbL05g23300 AT1G01060 NA NA NA NbL05g16800 AT1G01090 -1.01 -1.02 NA NbL04g02370 AT1G01100 NA 0 NA NbL01g21750 AT1G01110 NA NA NA NbL10g24130 AT1G01120 NA 1.05 NA NbL12g16640 AT1G01140 NA NA NA NbL14g20900 AT1G01170 NA NA NA NbL08g10890 AT1G01180 NA 7.61 NA NbL08g10690 AT1G01200 NA 0 NA NbL08g10640 AT1G01220 1.89 NA NA NbL18g08540 AT1G01225 1.08 1.24 NA NbL18g08530 AT1G01230 NA 0.75 NA NbL12g16100 AT1G01250 NA NA NA NbL02g00760 AT1G01260 NA 0 NA NbL10g24260 AT1G01280 NA NA NA NbL12g16130 AT1G01290 NA NA NA NbL18g08410 AT1G01300 NA -0.62 NA NbL08g10290 AT1G01320 -1.95 -2.03 NA NbL02g15400 AT1G01350 0.62 0.69 NA NbL18g08090 AT1G01360 0.91 0.55 NA NbL08g10090 AT1G01370 NA NA NA NbL18g08010 AT1G01430 -1.85 -2.39 NA NbL18g07500 AT1G01470 -1.39 NA NA NbL17g33350 AT1G01480 1.09 NA NA NbL12g16480 AT1G01490 1.2 NA NA NbL10g24610 AT1G01500 NA NA NA NbL08g09530 AT1G01510 NA NA NA NbL18g07410 AT1G01540 -1.32 -0.67 NA NbL08g09330 AT1G01580 -1.27 NA NA NbL17g24380 AT1G01610 -2.2 -2.36 NA NbL17g32890 AT1G01620 NA NA NA NbL07g00590 AT1G01630 -2.24 -2.47 NA NbL17g24410 AT1G01650 1.52 0.85 NA NbL08g09010 AT1G01690 NA NA NA NbL17g24640 AT1G01710 0.76 NA NA NbL13g15540 AT1G01720 1.41 NA NA NbL02g01140 AT1G01730 NA NA NA NbL08g08550 AT1G01750 NA NA NA NbL12g16500 AT1G01760 NA NA NA NbL08g08660 AT1G01770 1.04 0.89 NA NbL08g08670 AT1G01780 NA NA NA NbL15g28040 AT1G01790 -0.81 -0.61 NA NbL10g28050 AT1G01820 -0.85 -0.83 NA NbL08g07790 AT1G01840 NA NA NA NbL17g25450 AT1G01860 -0.88 -0.85 NA NbL17g25410 AT1G01880 NA 0 NA NbL08g07940 AT1G01900 -2.04 0 NA NbL14g12920 AT1G01910 NA 0 NA NbL08g07870 AT1G01920 NA NA NA NbL08g07440 AT1G01930 NA NA NA NbL13g03800 AT1G01940 NA NA NA NbL08g07400 AT1G01950 NA 0 NA NbL08g07300 AT1G01970 -0.92 -0.49 NA NbL16g22200 AT1G02000 NA 0 NA NbL08g07140 AT1G02010 NA NA NA NbL08g06980 AT1G02020 NA NA NA NbL10g18220 AT1G02030 NA NA NA NbL02g01030 AT1G02040 NA NA NA NbL08g19450 AT1G02050 NA NA NA NbL16g23390 AT1G02060 -1.31 0 NA NbL08g19340 AT1G02065 NA 0 NA NbL18g18040 AT1G02080 NA NA NA NbL08g19730 AT1G02090 NA NA NA NbL08g19750 AT1G02100 NA NA NA NbL08g19790 AT1G02120 1.03 0.58 NA NbL10g17510 AT1G02130 2.13 1.18 NA NbL10g06290 AT1G02140 -1.04 0 NA NbL08g20000 AT1G02145 NA 0 NA NbL08g20020 AT1G02150 -1.27 -1.15 NA NbL08g18910 AT1G02170 3.35 6.66 NA NbL17g07230 AT1G02180 -1.52 -2.33 NA NbL17g22260 AT1G02205 -1.19 -1.21 NA NbL10g05850 AT1G02260 NA NA NA NbL00g03810 AT1G02305 2.6 2.06 NA NbL08g24100 AT1G02330 NA NA NA NbL18g14610 AT1G02335 NA NA NA NbL08g15320 AT1G02370 NA 0 NA NbL14g19430 AT1G02400 NA NA NA NbL10g09870 AT1G02410 NA NA NA NbL07g08790 AT1G02420 -0.93 -0.82 NA NbL08g15480 AT1G02460 NA NA NA NbL18g05080 AT1G02475 -1.64 -1.02 NA NbL19g02030 AT1G02500 NA -1.73 NA NbL04g25050 AT1G02520 NA NA NA NbL04g25070 AT1G02530 NA NA NA NbL14g21810 AT1G02560 -1.08 -0.96 NA NbL18g04640 AT1G02610 NA 0 NA NbL05g20860 AT1G02620 NA -1.58 NA NbL07g17140 AT1G02630 NA NA NA NbL04g10620 AT1G02640 NA NA NA NbL18g04550 AT1G02660 1.58 1.56 NA NbL02g25710 AT1G02680 NA NA NA NbL18g04410 AT1G02700 NA NA NA NbL08g24680 AT1G02730 NA NA NA NbL15g08430 AT1G02740 NA NA NA NbL05g20390 AT1G02790 NA NA NA NbL16g30210 AT1G02810 NA NA NA NbL18g00470 AT1G02816 1.58 NA NA NbL02g16080 AT1G02840 -0.65 -0.44 NA NbL14g08500 AT1G02850 -1.14 -1.48 NA NbL08g25130 AT1G02860 NA 0 NA NbL18g00180 AT1G02870 NA 0 NA NbL08g25170 AT1G02890 NA 0.48 NA NbL18g00010 AT1G02910 -1.78 -1.92 NA NbL12g00730 AT1G02920 2.5 2.03 NA NbL08g25360 AT1G02960 -0.6 -0.52 NA NbL08g25370 AT1G02970 NA NA NA NbL12g00950 AT1G03000 -0.82 NA NA NbL08g25490 AT1G03010 NA 0 NA NbL10g13600 AT1G03020 NA NA NA NbL04g07260 AT1G03030 0.52 0.43 NA NbL06g20010 AT1G03050 NA NA NA NbL04g07390 AT1G03055 NA NA NA NbL04g07470 AT1G03060 NA NA NA NbL14g15030 AT1G03070 NA 1.11 NA NbL14g15100 AT1G03080 1.1 0.99 NA NbL14g15120 AT1G03090 1.35 1.82 NA NbL03g04900 AT1G03100 NA -0.58 NA NbL12g00990 AT1G03110 NA NA NA NbL18g03280 AT1G03120 NA NA NA NbL09g02010 AT1G03130 -3.46 -4.6 NA NbL18g03220 AT1G03140 NA 0.66 NA NbL14g09420 AT1G03150 NA 1.02 NA NbL18g03110 AT1G03160 -1.42 -1.42 NA NbL18g03050 AT1G03180 NA NA NA NbL07g19320 AT1G03190 NA NA NA NbL14g20250 AT1G03220 NA 1.73 NA NbL14g20260 AT1G03230 -1.94 0 NA NbL08g25860 AT1G03250 NA NA NA NbL08g25930 AT1G03270 NA NA NA NbL06g03670 AT1G03280 NA 0.56 NA NbL08g25920 AT1G03290 0.98 0.77 NA NbL18g02870 AT1G03310 -1.13 -1.04 NA NbL14g08840 AT1G03330 NA 0 NA NbL18g02700 AT1G03350 0.55 0.32 NA NbL08g26140 AT1G03360 NA 0 NA NbL03g01290 AT1G03370 NA NA NA NbL14g23860 AT1G03390 NA NA NA NbL09g18130 AT1G03440 -1.62 -1.89 NA NbL09g18280 AT1G03470 NA NA NA NbL14g30120 AT1G03475 -2.73 -2.55 NA NbL05g22070 AT1G03510 NA NA NA NbL15g29790 AT1G03520 NA 0 NA NbL10g03530 AT1G03530 NA -0.99 NA NbL01g10650 AT1G03540 NA NA NA NbL01g10740 AT1G03560 NA NA NA NbL03g23360 AT1G03590 NA 1.14 NA NbL15g29690 AT1G03600 -4.01 -4.92 NA NbL14g29450 AT1G03610 NA NA NA NbL01g10810 AT1G03620 NA NA NA NbL06g27210 AT1G03650 1.17 0 NA NbL03g23600 AT1G03687 -0.73 -1.28 NA NbL14g25690 AT1G03700 NA NA NA NbL01g10510 AT1G03730 NA 1.36 NA NbL15g29240 AT1G03750 NA 0.57 NA NbL05g06420 AT1G03760 0.92 0 NA NbL03g23850 AT1G03770 -0.51 NA NA NbL01g10410 AT1G03780 0 1.51 0 NbL03g24480 AT1G03790 NA NA NA NbL03g24260 AT1G03840 NA 0 NA NbL06g27080 AT1G03860 NA NA NA NbL03g24210 AT1G03870 -4.8 -4.58 NA NbL08g26830 AT1G03890 NA NA NA NbL12g01150 AT1G03900 1.65 1.82 NA NbL04g04320 AT1G03905 NA -1.1 NA NbL01g07400 AT1G03910 NA NA NA NbL01g10620 AT1G03940 3.09 0 NA NbL12g01190 AT1G03950 NA 0 NA NbL08g18190 AT1G03970 NA NA NA NbL14g33240 AT1G04010 1.31 0 NA NbL02g09270 AT1G04020 NA 0 NA NbL14g33180 AT1G04030 -1 0 NA NbL08g27300 AT1G04040 NA NA NA NbL04g04640 AT1G04080 NA -0.52 NA NbL14g32990 AT1G04110 -2.82 -2.53 NA NbL14g32930 AT1G04120 NA NA NA NbL04g04770 AT1G04130 NA 0 NA NbL10g15200 AT1G04140 -1.09 -0.51 NA NbL04g04870 AT1G04150 NA NA NA NbL08g00040 AT1G04170 1.01 NA NA NbL09g17310 AT1G04180 NA NA NA NbL04g11430 AT1G04190 NA NA NA NbL04g11540 AT1G04200 NA -1.07 NA NbL04g11640 AT1G04210 NA NA NA NbL08g29640 AT1G04220 2.81 2.95 NA NbL06g03040 AT1G04250 NA NA NA NbL18g03950 AT1G04260 NA 0 NA NbL09g00070 AT1G04280 NA 0 NA NbL10g09850 AT1G04290 NA NA NA NbL04g17970 AT1G04300 NA 0.47 NA NbL06g29160 AT1G04340 NA 0 NA NbL08g07770 AT1G04360 -0.61 -0.67 NA NbL18g05850 AT1G04390 NA NA NA NbL08g26750 AT1G04400 0.66 0.64 NA NbL18g03390 AT1G04410 NA 0.4 NA NbL06g29070 AT1G04420 -2.51 -2.45 NA NbL08g26870 AT1G04430 -1.13 -1.21 NA NbL09g17460 AT1G04450 NA NA NA NbL04g23390 AT1G04500 NA NA NA NbL08g27480 AT1G04510 NA 0.48 NA NbL14g15750 AT1G04520 -4.79 0 NA NbL08g27630 AT1G04530 NA NA NA NbL08g27740 AT1G04555 0.8 NA NA NbL08g27780 AT1G04560 NA NA NA NbL14g16080 AT1G04570 NA NA NA NbL07g08900 AT1G04580 -1 0 NA NbL16g32530 AT1G04590 NA -1.21 NA NbL08g28020 AT1G04600 NA NA NA NbL08g28030 AT1G04610 NA NA NA NbL08g28050 AT1G04620 -1.31 0 NA NbL01g02040 AT1G04635 NA NA NA NbL01g26200 AT1G04640 -1.09 -0.94 NA NbL14g16480 AT1G04650 NA 0 NA NbL04g23650 AT1G04690 NA NA NA NbL08g28470 AT1G04700 -0.88 0 NA NbL08g28500 AT1G04710 1.19 1.05 NA NbL08g28610 AT1G04730 NA 0 NA NbL12g12190 AT1G04750 0.88 0.59 NA NbL14g07800 AT1G04760 0.78 0.75 NA NbL08g28560 AT1G04780 0.68 0.83 NA NbL08g28530 AT1G04790 NA NA NA NbL08g30170 AT1G04840 -0.86 0 NA NbL18g26090 AT1G04850 NA 0.83 NA NbL12g27340 AT1G04860 -0.81 0 NA NbL15g16820 AT1G04870 NA 0 NA NbL08g30050 AT1G04880 NA -0.5 NA NbL19g19240 AT1G04900 -1.5 0 NA NbL10g15490 AT1G04910 NA NA NA NbL08g30260 AT1G04920 -0.85 NA NA NbL05g23880 AT1G04940 -1.24 -0.89 NA NbL14g24320 AT1G04945 NA NA NA NbL01g09410 AT1G04950 0.52 NA NA NbL10g29580 AT1G04960 NA -0.53 NA NbL05g02540 AT1G04970 NA NA NA NbL03g22710 AT1G04980 NA NA NA NbL03g22730 AT1G04985 1.08 0 NA NbL16g01130 AT1G05000 NA 1.88 NA NbL10g03910 AT1G05010 4.76 4.77 NA NbL10g04030 AT1G05020 NA NA NA NbL03g21490 AT1G05030 NA NA NA NbL12g22000 AT1G05055 NA 0 NA NbL11g21170 AT1G05060 NA NA NA NbL02g28020 AT1G05070 NA NA NA NbL03g22960 AT1G05087 NA 0 NA NbL12g22380 AT1G05120 0.96 NA NA NbL03g17990 AT1G05150 NA -0.52 NA NbL08g20730 AT1G05160 NA NA NA NbL05g10730 AT1G05170 NA -0.52 NA NbL14g04190 AT1G05180 NA 0 NA NbL19g00340 AT1G05190 -3.19 -2.91 NA NbL12g22410 AT1G05200 1.16 1.02 NA NbL10g03810 AT1G05230 NA NA NA NbL10g03780 AT1G05250 NA NA NA NbL03g21550 AT1G05260 NA NA NA NbL02g07870 AT1G05270 NA NA NA NbL06g27540 AT1G05280 0 3.67 0 NbL02g12500 AT1G05300 NA NA NA NbL05g16950 AT1G05310 NA NA NA NbL06g11370 AT1G05350 NA NA NA NbL04g12570 AT1G05370 NA NA NA NbL09g22670 AT1G05380 NA NA NA NbL09g22640 AT1G05385 -1.37 -1.73 NA NbL04g12320 AT1G05410 NA 0 NA NbL04g12410 AT1G05420 NA NA NA NbL04g12280 AT1G05440 NA NA NA NbL13g16960 AT1G05450 NA NA NA NbL13g16940 AT1G05460 -2.67 0 NA NbL16g28630 AT1G05490 -0.66 0 NA NbL14g00960 AT1G05500 -0.57 -0.61 NA NbL08g31460 AT1G05510 NA NA NA NbL10g15600 AT1G05520 NA NA NA NbL08g30820 AT1G05530 NA 2.46 NA NbL13g06320 AT1G05570 1.65 1.61 NA NbL08g21560 AT1G05577 NA NA NA NbL13g06500 AT1G05590 0.62 NA NA NbL01g02460 AT1G05600 NA 0 NA NbL01g18740 AT1G05610 NA NA NA NbL09g04740 AT1G05620 0.86 0.85 NA NbL11g13940 AT1G05630 -1.43 0 NA NbL11g09810 AT1G05670 NA 0.37 NA NbL04g23320 AT1G05675 NA 4.68 NA NbL04g23310 AT1G05680 -0.57 -0.91 NA NbL14g25000 AT1G05690 1.09 1.06 NA NbL06g28850 AT1G05720 NA NA NA NbL09g00940 AT1G05730 NA 0 NA NbL13g26380 AT1G05780 NA NA NA NbL08g32130 AT1G05785 NA NA NA NbL18g01950 AT1G05790 NA 0 NA NbL08g31970 AT1G05800 NA NA NA NbL08g31480 AT1G05805 NA NA NA NbL04g24470 AT1G05820 0.6 0.61 NA NbL18g01790 AT1G05830 NA -1.06 NA NbL17g03110 AT1G05840 0 -0.61 0 NbL04g24340 AT1G05850 -1.16 0 NA NbL08g29670 AT1G05900 NA NA NA NbL11g16510 AT1G05910 -0.7 0 NA NbL10g27670 AT1G05940 NA 0.56 NA NbL07g12630 AT1G05950 -1.49 -2.08 NA NbL09g27440 AT1G05970 NA NA NA NbL14g04770 AT1G06030 NA 0.49 NA NbL12g15690 AT1G06040 NA 0 NA NbL06g28760 AT1G06050 1.09 1.16 NA NbL03g18180 AT1G06060 NA NA NA NbL06g29170 AT1G06070 -0.8 -0.54 NA NbL09g00670 AT1G06110 NA 1.1 NA NbL06g29380 AT1G06130 NA NA NA NbL12g28280 AT1G06143 NA 0 NA NbL19g09290 AT1G06150 1.46 1.62 NA NbL09g17560 AT1G06180 NA 0 NA NbL14g33580 AT1G06190 NA NA NA NbL04g04040 AT1G06210 -0.74 -0.83 NA NbL01g06700 AT1G06220 NA NA NA NbL06g26350 AT1G06230 NA -0.54 NA NbL01g10180 AT1G06240 -0.98 -1.29 NA NbL04g06780 AT1G06260 NA NA NA NbL14g32160 AT1G06270 -1.06 0 NA NbL03g24140 AT1G06280 NA NA NA NbL18g05560 AT1G06290 0.98 1.13 NA NbL02g24520 AT1G06330 NA NA NA NbL03g01960 AT1G06340 NA NA NA NbL15g28460 AT1G06390 NA NA NA NbL15g28290 AT1G06400 NA 0.91 NA NbL05g14940 AT1G06410 -1.12 -0.47 NA NbL02g15920 AT1G06440 0 -1.51 0 NbL15g28120 AT1G06460 NA -0.64 NA NbL15g28140 AT1G06470 NA -0.44 NA NbL15g27780 AT1G06490 NA 1.55 NA NbL14g13780 AT1G06510 NA 0 NA NbL05g15400 AT1G06520 NA NA NA NbL06g26760 AT1G06550 1.75 0.61 NA NbL11g22360 AT1G06560 NA 0 NA NbL12g19810 AT1G06570 NA 0.5 NA NbL17g04780 AT1G06590 NA 0 NA NbL18g03620 AT1G06620 -1.44 -2.04 NA NbL03g05250 AT1G06650 NA -0.52 NA NbL05g17490 AT1G06660 NA 0 NA NbL05g17380 AT1G06680 -3.6 -4.84 NA NbL11g22700 AT1G06690 -0.61 -0.84 NA NbL07g06880 AT1G06710 -1.2 -1 NA NbL08g12060 AT1G06720 -0.88 -0.71 NA NbL14g34030 AT1G06730 -0.79 -0.46 NA NbL14g01750 AT1G06740 0.69 0.84 NA NbL07g18360 AT1G06750 NA NA NA NbL08g29120 AT1G06770 NA NA NA NbL16g33580 AT1G06780 NA 0 NA NbL01g05570 AT1G06790 NA 0 NA NbL08g29110 AT1G06800 NA NA NA NbL15g05290 AT1G06820 -1.03 -0.66 NA NbL01g18890 AT1G06840 -0.81 -0.85 NA NbL03g19860 AT1G06870 NA NA NA NbL09g16110 AT1G06890 NA 0 NA NbL05g10440 AT1G06900 -0.77 -0.54 NA NbL08g20310 AT1G06950 -1.21 -1.1 NA NbL09g15830 AT1G06970 NA NA NA NbL05g10080 AT1G06980 NA NA NA NbL14g06560 AT1G07010 0.6 NA NA NbL09g15870 AT1G07030 NA NA NA NbL01g14190 AT1G07040 NA 2.9 NA NbL09g15920 AT1G07060 NA NA NA NbL02g10170 AT1G07080 0.85 0.83 NA NbL14g06490 AT1G07090 1.62 1.13 NA NbL09g07900 AT1G07110 -2.07 -2.49 NA NbL08g23320 AT1G07130 -1.24 0 NA NbL07g02370 AT1G07160 NA NA NA NbL12g02250 AT1G07180 -3.3 -4.54 NA NbL19g05210 AT1G07200 NA 0 NA NbL08g30800 AT1G07210 NA NA NA NbL09g08010 AT1G07220 NA NA NA NbL19g04180 AT1G07230 2.38 1.46 NA NbL18g26230 AT1G07270 NA 0 NA NbL17g19020 AT1G07310 NA 0.59 NA NbL18g15790 AT1G07320 -2.64 -4.13 NA NbL09g08360 AT1G07350 NA NA NA NbL03g00670 AT1G07360 0.55 0.52 NA NbL19g04140 AT1G07380 NA -0.46 NA NbL08g12570 AT1G07390 NA NA NA NbL05g07760 AT1G07400 2.92 2.48 NA NbL02g10430 AT1G07410 -2.09 -1.47 NA NbL12g02580 AT1G07420 NA 0.94 NA NbL18g27550 AT1G07430 0 4.47 0 NbL04g03640 AT1G07440 NA NA NA NbL18g27530 AT1G07470 -0.47 -0.68 NA NbL13g12080 AT1G07510 0.47 0.4 NA NbL15g15740 AT1G07530 0.99 0.69 NA NbL18g27390 AT1G07540 0.84 NA NA NbL02g10730 AT1G07570 NA 0.44 NA NbL01g00680 AT1G07590 NA NA NA NbL03g09730 AT1G07615 NA NA NA NbL05g06780 AT1G07630 NA 0 NA NbL09g20080 AT1G07645 NA NA NA NbL02g23700 AT1G07650 -0.69 -0.6 NA NbL17g11920 AT1G07670 0.61 NA NA NbL03g20410 AT1G07700 -0.54 -0.88 NA NbL18g26980 AT1G07705 0 1.14 0 NbL05g06020 AT1G07710 2.67 2.19 NA NbL01g03650 AT1G07720 -1.07 0 NA NbL09g19910 AT1G07730 NA NA NA NbL01g03540 AT1G07740 -1.27 -1.09 NA NbL00g00570 AT1G07745 NA NA NA NbL00g00580 AT1G07750 2.44 2.45 NA NbL01g12610 AT1G07780 NA NA NA NbL07g22330 AT1G07790 -2.25 -1.58 NA NbL17g11940 AT1G07810 NA NA NA NbL16g12350 AT1G07830 NA -0.85 NA NbL01g08380 AT1G07840 NA 0 NA NbL17g11710 AT1G07850 NA NA NA NbL01g04050 AT1G07870 2.47 1.62 NA NbL01g04090 AT1G07880 NA 0 NA NbL02g06280 AT1G07890 0.79 NA NA NbL18g26730 AT1G07900 NA 3.42 NA NbL01g04490 AT1G07910 NA NA NA NbL01g04610 AT1G07960 NA 0 NA NbL07g21850 AT1G07970 NA 0 NA NbL08g22510 AT1G07985 NA NA NA NbL12g03410 AT1G07990 NA 0 NA NbL07g21410 AT1G08010 -1.39 -1.82 NA NbL17g10560 AT1G08030 NA 0 NA NbL02g05880 AT1G08040 NA 0 NA NbL03g01210 AT1G08050 NA NA NA NbL07g21240 AT1G08060 -0.67 NA NA NbL14g26830 AT1G08070 -0.94 0 NA NbL01g19510 AT1G08080 NA NA NA NbL09g19500 AT1G08090 NA NA NA NbL17g10290 AT1G08110 -0.85 NA NA NbL17g10230 AT1G08125 NA NA NA NbL17g10020 AT1G08130 NA -0.67 NA NbL02g05240 AT1G08170 NA NA NA NbL07g22410 AT1G08190 NA 0.9 NA NbL07g20380 AT1G08200 NA -1.31 NA NbL07g22420 AT1G08220 NA 0 NA NbL07g20310 AT1G08230 NA 0 NA NbL09g19180 AT1G08250 2.12 NA NA NbL07g19840 AT1G08260 NA 0 NA NbL09g19010 AT1G08280 NA 0 NA NbL09g19000 AT1G08290 NA NA NA NbL08g10990 AT1G08315 0.8 0.65 NA NbL07g07530 AT1G08320 NA NA NA NbL09g18920 AT1G08350 NA NA NA NbL07g05940 AT1G08360 NA -0.43 NA NbL05g18680 AT1G08370 NA 0.41 NA NbL09g14270 AT1G08380 -4.81 -5.89 NA NbL07g20410 AT1G08390 NA NA NA NbL07g08400 AT1G08410 NA NA NA NbL07g08230 AT1G08440 NA NA NA NbL10g10300 AT1G08450 1.23 0.7 NA NbL09g14420 AT1G08460 -0.53 -0.74 NA NbL06g28450 AT1G08465 NA 0 NA NbL17g13520 AT1G08470 NA -0.76 NA NbL06g28460 AT1G08480 1.43 1.16 NA NbL09g15910 AT1G08490 NA NA NA NbL08g08160 AT1G08500 NA 2.77 NA NbL06g13460 AT1G08510 NA NA NA NbL13g18230 AT1G08520 -2.11 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NA NA NbL02g16370 AT2G22630 NA NA NA NbL14g17250 AT2G22640 NA 0 NA NbL07g22670 AT2G22650 -1.36 -1.35 NA NbL11g17170 AT2G22670 NA 0.59 NA NbL02g16210 AT2G22680 NA NA NA NbL04g08370 AT2G22720 NA 0 NA NbL08g00250 AT2G22730 -0.52 NA NA NbL16g23160 AT2G22740 -0.67 0 NA NbL02g08840 AT2G22750 NA NA NA NbL08g00320 AT2G22780 -1.42 -1.48 NA NbL12g13360 AT2G22795 NA NA NA NbL02g08530 AT2G22840 NA NA NA NbL04g08450 AT2G22850 NA NA NA NbL05g03930 AT2G22870 NA NA NA NbL12g24550 AT2G22900 NA 0 NA NbL02g08370 AT2G22910 0.79 0 NA NbL03g02160 AT2G22950 NA 0.9 NA NbL04g18140 AT2G23000 NA NA NA NbL12g24790 AT2G23060 2.95 2.76 NA NbL12g07560 AT2G23070 NA NA NA NbL02g08010 AT2G23093 NA NA NA NbL04g25850 AT2G23140 0.64 NA NA NbL12g25050 AT2G23150 0.64 0.63 NA NbL09g26040 AT2G23180 1.49 1.69 NA NbL12g25300 AT2G23320 2.12 1.54 NA NbL12g25400 AT2G23340 NA -0.96 NA NbL11g18970 AT2G23350 NA -0.6 NA NbL12g26570 AT2G23360 -0.96 -1.26 NA NbL12g26540 AT2G23380 -1.69 0 NA NbL18g15310 AT2G23390 0 1.09 0 NbL12g26450 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AT2G24765 0.96 0.53 NA NbL01g23070 AT2G24820 0.97 0.68 NA NbL10g22140 AT2G24830 NA NA NA NbL11g04520 AT2G24840 NA NA NA NbL02g05130 AT2G24860 -1.02 -0.88 NA NbL16g30250 AT2G24940 1.41 1.24 NA NbL02g05120 AT2G24970 NA NA NA NbL15g01970 AT2G25010 NA NA NA NbL14g00580 AT2G25050 1.06 1.26 NA NbL07g17230 AT2G25060 NA NA NA NbL13g04220 AT2G25080 -1.34 -1.31 NA NbL11g03110 AT2G25100 NA NA NA NbL06g06280 AT2G25110 0.82 NA NA NbL05g20200 AT2G25140 NA NA NA NbL09g11160 AT2G25170 NA -0.74 NA NbL07g20450 AT2G25180 2.18 1.6 NA NbL07g01610 AT2G25220 -0.93 0 NA NbL13g04390 AT2G25270 NA NA NA NbL07g18830 AT2G25280 0.98 NA NA NbL12g02670 AT2G25290 -2 0 NA NbL16g30240 AT2G25300 NA 0 NA NbL13g04430 AT2G25310 NA NA NA NbL17g08110 AT2G25320 NA 0 NA NbL08g10250 AT2G25410 NA NA NA NbL07g18440 AT2G25430 NA NA NA NbL07g18400 AT2G25460 NA NA NA NbL14g01160 AT2G25490 -1.28 NA NA NbL17g07660 AT2G25520 0.71 0.58 NA NbL09g10850 AT2G25530 1.15 0.64 NA NbL07g18140 AT2G25540 NA 0 NA NbL14g01370 AT2G25570 0.84 NA NA 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AT4G21192 NA NA NA NbL02g27160 AT4G21200 NA NA NA NbL10g23620 AT4G21210 1.6 1.63 NA NbL19g21990 AT4G21215 NA 2.62 NA NbL04g17060 AT4G21220 0.56 NA NA NbL09g02170 AT4G21270 -0.88 0 NA NbL02g21920 AT4G21300 -0.66 0 NA NbL02g27070 AT4G21320 NA NA NA NbL02g26980 AT4G21330 NA NA NA NbL19g22270 AT4G21350 0.89 NA NA NbL04g16970 AT4G21380 -1.06 0 NA NbL19g22340 AT4G21390 NA -1.75 NA NbL02g26640 AT4G21440 NA NA NA NbL05g22770 AT4G21445 -1.3 -1.59 NA NbL19g22690 AT4G21450 0.61 NA NA NbL19g22810 AT4G21470 1.28 1.43 NA NbL03g11800 AT4G21480 NA NA NA NbL02g26510 AT4G21490 2.43 0 NA NbL09g20840 AT4G21510 NA 0.95 NA NbL02g26470 AT4G21520 NA 0 NA NbL19g22950 AT4G21530 NA 0 NA NbL04g16870 AT4G21540 NA NA NA NbL17g24200 AT4G21550 NA NA NA NbL02g26280 AT4G21580 1.31 1.21 NA NbL19g23070 AT4G21585 1.57 1.88 NA NbL02g25660 AT4G21610 NA 0 NA NbL19g23370 AT4G21660 -0.46 NA NA NbL02g25930 AT4G21670 NA NA NA NbL02g25610 AT4G21700 NA 0 NA NbL15g25600 AT4G21705 NA 0 NA NbL02g25650 AT4G21710 NA NA NA NbL10g27530 AT4G21720 NA NA NA NbL02g27290 AT4G21750 NA NA NA NbL19g21860 AT4G21760 -0.71 -1.39 NA NbL02g27350 AT4G21770 -1.39 -1.21 NA NbL18g17300 AT4G21790 -1.32 0 NA NbL10g25070 AT4G21800 NA NA NA NbL02g27460 AT4G21820 NA NA NA NbL00g05560 AT4G21860 NA NA NA NbL19g12540 AT4G21870 NA -1.23 NA NbL02g27500 AT4G21890 NA NA NA NbL02g27580 AT4G21903 NA NA NA NbL04g17150 AT4G21940 NA 0 NA NbL19g12360 AT4G21960 NA -2.07 NA NbL18g06580 AT4G21970 NA NA NA NbL09g20740 AT4G21980 NA 0 NA NbL02g27850 AT4G21990 1.67 0.89 NA NbL07g17390 AT4G22000 NA NA NA NbL19g15610 AT4G22010 NA 0 NA NbL02g27880 AT4G22030 NA NA NA NbL10g09410 AT4G22070 1.54 1.87 NA NbL19g15820 AT4G22120 NA -1.53 NA NbL02g28130 AT4G22130 NA NA NA NbL14g03960 AT4G22140 0.97 1.61 NA NbL19g15940 AT4G22150 1.17 0.86 NA NbL02g12250 AT4G22190 NA NA NA NbL18g15990 AT4G22200 0.82 0.76 NA NbL16g13570 AT4G22220 0.93 1.03 NA NbL19g15850 AT4G22240 0.61 NA NA NbL11g02080 AT4G22260 -0.5 -0.81 NA NbL02g21000 AT4G22285 NA 0 NA NbL13g17640 AT4G22290 -1.56 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Created: 11th Apr 2022 at 14:16
Last updated: 21st Sep 2022 at 10:45
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Version 1 (earliest) Created 11th Apr 2022 at 14:16 by Marko Petek
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Related items
Advanced People list for this Data file with search and filtering
https://orcid.org/0000-0003-3644-7827PhD in Biotechnology, Research Associate at Department of Biotechnology and Systems Biology, National Institute of Biology
Advanced Programmes list for this Data file with search and filtering
National Institute of Biology, Department of Biotechnology and Systems Biology projects
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato, _p_RNAinVAL, tst, tst2, Playground
Web page: http://www.nib.si/eng/index.php/departments/department-of-biotechnology-and-systems-biology
Advanced Projects list for this Data file with search and filtering
SUSPHIRE aims to provide a sustainable, low-cost biomanufacturing platform for the commercial production of insect pheromones.
Synthetic biology data management spreadsheet: https://fairdomhub.org/data_files/6036
Programme: NIBSys
Public web page: http://susphire.info/susphireproject/
Start date: 1st Apr 2018
End date: 30th Sep 2021
Advanced Investigations list for this Data file with search and filtering
Short Name: T21_SXPsysbio Title: Use a systems biology approach to identify regulatory bottlenecks in SxPv1 Description: Samples from SXPv1.0 plants as well as sister nulls (progeny from the original transgenic event in which the transgene has segregated) and wild type will be grown and leaf samples taken for RNA extraction and profiling of primary metabolites and volatiles (target pheromones as well as potential derivatives) (P1, P5). Phenotypic and GC-MS data will be obtained and analysed from ...
Submitter: Marko Petek
Studies: Investigation files, _S_P1_SPv10T0andT1, _S_P1_SPv10T2andT3, _S_P1_SPv1TransientExp, _S_P1_SxPAltAcTransferases, _S_P1_SxPv10vsSxP12, _S_P1_SxPv12T2, _S_P4_CoExpNetViz, _S_P4_DiNAR, _S_P4_GAtreat, _S_P4_SxP10-newG-DE, _S_P4_SxP10-oldG-DE, _S_P4_SxP1012-finalG, _S_P4_SxP12-newG-DE
Assays: _A_00_SxP_photos-phenotyping, _A_01_RNA1-RNAisol, _A_01_SxP_Data_Only-CoExp, _A_01_SxPv12_fastq-QC, _A_01_mapping-CLC, _A_01_toNewGenome-CLC-mapping, _A_02_FastQC-bioinfo, _A_02_Nb_datasets-CoExp, _A_02_SxPv12_mapping-CLC, _A_02_limmavoomDE-R, _A_02a_limmavoom-multim-R, _A_02a_limmavoomDEbylines-R, _A_02b_limmavoom-uniquem-R, _A_03_MapMan-visualisation, _A_03_NewGenome-MapMan, _A_03_SxPv12_limmavoom_DE-R, _A_03_mapping-CLC, _A_03a_mapping2-STAR, _A_04_GSEA-Stat, _A_04_MapManBINenrich-GSEA, _A_04_Mercator-bioinfo, _A_04_SxPv12_GeneSetEnrichment-RNAseg-GSEA, _A_05_DEstat-R, _A_05_Phenotype_analysis-Stat, _A_05_VOCcomp-Bioinfo, _A_05a_DEstat2-R, _A_05b_DElow-wt-R, _A_06_MapMan-bioinfo, _A_06_SxPv1-0_Illumina-Centrifuge, _A_07_NbAUSv1-0-InterPro, _A_07_transgenes-CLC, _A_CKN-DiNAR, _A_CKN_NbL35-DiNAR, _A_LeavesSxPv10vsv12-GCMS, _A_P4_v10v12-phenotyping, _A_PIS-DiNAR, _A_PIS-SxPv12-DiNAR, _A_PIS_NbL35-DiNAR, _A_RootsSxPv10vsv12-GCMS, _A_SP10T0Analysis-GCMS, _A_SP10T1Analysis-GCMS, _A_SPv10EaDActAnalysis-GCMS, _A_SPv10T2Analysis-GCMS, _A_SPv10T3Analysis-GCMS, _A_SPv10_phenotyping-Images, _A_SxPAlternativeAcetyltransferases-GCMS, _A_SxPv10vsv12-phenotyping, _A_SxPv12ScreeningT2-GCMS, _A_TransientSPv11andSPv12-GCMS, _I_T21_SXPsysbio-files, _S_P1_SPv10T0andT1-files, _S_P1_SPv10T2andT3-files, _S_P1_SPv1TransientExp-files, _S_P1_SxPAltAcTransferases-files, _S_P1_SxPv10vsSxP12-files, _S_P1_SxPv12T2-files, _S_P4_CoExpNetViz-files, _S_P4_DiNAR-files, _S_P4_GAtreat-files, _S_P4_SxP10-newG-DE-files, _S_P4_SxP10-oldG-DE-files, _S_P4_SxP1012-finalG-files, _S_P4_SxP12-newG-DE-files
Advanced Studies list for this Data file with search and filtering
Short Name: DiNAR Title: DiNAR analyses of SxP DE data Description: DiNAR visualisation of SxPv1.0 and SxPv1.2 expressoin data in either PIS or CKN networks. Raw Data: Principal investigator: Ĺ pela Baebler License: Creative Commons Attribution 4.0 Sharing permission: Private Upload to FAIRDOMHub: Yes
Submitter: Marko Petek
Investigation: _I_T21_SXPsysbio
Assays: _A_CKN-DiNAR, _A_CKN_NbL35-DiNAR, _A_PIS-DiNAR, _A_PIS-SxPv12-DiNAR, _A_PIS_NbL35-DiNAR, _S_P4_DiNAR-files
Advanced Assays list for this Data file with search and filtering
Short Name: CKN_NbL35-DiNAR Assay Class: DRY Assay Type: DiNAR Title: Visualisation of SxP DE genes in CKN with DiNAR tool Description: Mapping to Nb genome v3.5, DE was done by groups (v1.0 low, v1.0 high, v1.2 high) against wt and without the 3 outliers. pISA Assay creation date: 2022-01-30 pISA Assay creator: Mojca Juteršek Phenodata: None Featuredata: Data:
Submitter: Marko Petek
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_T21_SXPsysbio
Study: _S_P4_DiNAR
