output/Expression Browser-SxP_transgenes.txt
Version 1

_p_SUSPHIRE/_I_T21_SXPsysbio/_S_P4_SxP10-oldG-DE/_A_07_transgenes-CLC/

SEEK ID: https://fairdomhub.org/data_files/5176?version=1

Filename: output/Expression Browser-SxP_transgenes.txt  Download

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"Name"	"Chromosome"	"Region"	"Identifier"	"F_1_10_1_1 (paired) (GE) - Total counts"	"F_1_10_1_1 (paired) (GE) - RPKM"	"F_1_10_1_1 (paired) (GE) - TPM"	"F_1_10_1_1 (paired) (GE) - CPM"	"F_1_10_2_1 (paired) (GE) - Total counts"	"F_1_10_2_1 (paired) (GE) - RPKM"	"F_1_10_2_1 (paired) (GE) - TPM"	"F_1_10_2_1 (paired) (GE) - CPM"	"F_1_10_3_1 (paired) (GE) - Total counts"	"F_1_10_3_1 (paired) (GE) - RPKM"	"F_1_10_3_1 (paired) (GE) - TPM"	"F_1_10_3_1 (paired) (GE) - CPM"	"F_1_10_4_1 (paired) (GE) - Total counts"	"F_1_10_4_1 (paired) (GE) - RPKM"	"F_1_10_4_1 (paired) (GE) - TPM"	"F_1_10_4_1 (paired) (GE) - CPM"	"F_1_7_1_1 (paired) (GE) - Total counts"	"F_1_7_1_1 (paired) (GE) - RPKM"	"F_1_7_1_1 (paired) (GE) - TPM"	"F_1_7_1_1 (paired) (GE) - CPM"	"F_1_7_3_1 (paired) (GE) - Total counts"	"F_1_7_3_1 (paired) (GE) - RPKM"	"F_1_7_3_1 (paired) (GE) - TPM"	"F_1_7_3_1 (paired) (GE) - CPM"	"F_1_7_4_1 (paired) (GE) - Total counts"	"F_1_7_4_1 (paired) (GE) - RPKM"	"F_1_7_4_1 (paired) (GE) - TPM"	"F_1_7_4_1 (paired) (GE) - CPM"	"F_1_7_7_1 (paired) (GE) - Total counts"	"F_1_7_7_1 (paired) (GE) - RPKM"	"F_1_7_7_1 (paired) (GE) - TPM"	"F_1_7_7_1 (paired) (GE) - CPM"	"F_2_4_3_1 (paired) (GE) - Total counts"	"F_2_4_3_1 (paired) (GE) - RPKM"	"F_2_4_3_1 (paired) (GE) - TPM"	"F_2_4_3_1 (paired) (GE) - CPM"	"F_2_4_4_1 (paired) (GE) - Total counts"	"F_2_4_4_1 (paired) (GE) - RPKM"	"F_2_4_4_1 (paired) (GE) - TPM"	"F_2_4_4_1 (paired) (GE) - CPM"	"F_2_4_6_1 (paired) (GE) - Total counts"	"F_2_4_6_1 (paired) (GE) - RPKM"	"F_2_4_6_1 (paired) (GE) - TPM"	"F_2_4_6_1 (paired) (GE) - CPM"	"F_2_4_7_1 (paired) (GE) - Total counts"	"F_2_4_7_1 (paired) (GE) - RPKM"	"F_2_4_7_1 (paired) (GE) - TPM"	"F_2_4_7_1 (paired) (GE) - CPM"	"F_2_F_4_1 (paired) (GE) - Total counts"	"F_2_F_4_1 (paired) (GE) - RPKM"	"F_2_F_4_1 (paired) (GE) - TPM"	"F_2_F_4_1 (paired) (GE) - CPM"	"F_2_F_6_1 (paired) (GE) - Total counts"	"F_2_F_6_1 (paired) (GE) - RPKM"	"F_2_F_6_1 (paired) (GE) - TPM"	"F_2_F_6_1 (paired) (GE) - CPM"	"F_2_F_8_1 (paired) (GE) - Total counts"	"F_2_F_8_1 (paired) (GE) - RPKM"	"F_2_F_8_1 (paired) (GE) - TPM"	"F_2_F_8_1 (paired) (GE) - CPM"	"F_2_F_F_1 (paired) (GE) - Total counts"	"F_2_F_F_1 (paired) (GE) - RPKM"	"F_2_F_F_1 (paired) (GE) - TPM"	"F_2_F_F_1 (paired) (GE) - CPM"	"WT1_1 (paired) (GE) - Total counts"	"WT1_1 (paired) (GE) - RPKM"	"WT1_1 (paired) (GE) - TPM"	"WT1_1 (paired) (GE) - CPM"	"WT2_1 (paired) (GE) - Total counts"	"WT2_1 (paired) (GE) - RPKM"	"WT2_1 (paired) (GE) - TPM"	"WT2_1 (paired) (GE) - CPM"	"WT3_1 (paired) (GE) - Total counts"	"WT3_1 (paired) (GE) - RPKM"	"WT3_1 (paired) (GE) - TPM"	"WT3_1 (paired) (GE) - CPM"	"WT5_1 (paired) (GE) - Total counts"	"WT5_1 (paired) (GE) - RPKM"	"WT5_1 (paired) (GE) - TPM"	"WT5_1 (paired) (GE) - CPM"
Atr?11_desaturase	BBa_K1554001	1..981		4874	25310.3662894503	41548.6830943329	34934.5432302245	5859	31050.0497230059	49706.4883763653	44765.7428289002	4036	22194.6032491403	36156.3867931691	30745.9021647238	5375	23543.3515931626	38438.5595401881	34013.8094979655	20412	94380.188283482	144057.1088080419	127427.1697420944	29948	110137.9342657325	168128.1795037902	157713.0139135427	24015	109726.6364747761	162971.9367506172	175251.0452954085	11516	49189.3643163112	78086.7804339858	72053.2778771438	19505	104971.0297179578	155094.4684398157	121925.8921031849	14213	89679.5988269936	138740.3712491308	97054.7502650824	13436	76423.0221544403	118131.7653747868	94871.6222206244	12230	48676.6564379618	76248.3036616337	65425.739201702	5832	24657.3212628643	38991.9994786179	34283.1711222213	4777	22832.8717718731	36523.488740054	30920.3543816442	7767	39478.5898412393	62262.0457926813	56977.2817195233	7054	28370.1843487259	45899.740970188	40817.0381671317	0	0	0	0	7	32.4550893428	52.6281921078	43.7581165481	3	13.6601776725	22.111704227	18.81543953	6	30.8453847022	50.1124767484	42.6064293195
HarFAR_reductase	BBa_K1554002	1..1365		1751	6534.8467530853	10727.3942110882	12550.3457521795	2119	8070.6054191887	12919.8329161419	16190.2387872401	1549	6121.8685792507	9972.9040327363	11800.1492698605	2006	6314.7637097896	10309.9348400106	12694.2701121709	6026	20024.4576851989	30564.3115577848	37618.8577731658	8545	22584.8663686892	34476.3363524015	44999.9233301463	5988	19662.9023931456	29204.4064057859	43697.8246607914	4359	13381.1296601994	21242.1800577773	27273.379495178	7122	27546.2083584061	40699.4630266881	44519.6720614654	4758	21575.8887674508	33379.3511208822	32490.4314192121	5491	22446.1578358552	34696.4066099369	38771.961715797	5682	16252.9375854588	25458.9984418727	30396.4881556885	2437	7404.9181691973	11709.8107419885	14325.8038451395	2164	7433.5952198548	11890.7877214523	14007.0435172447	2978	10878.5090086511	17156.5962405578	21846.0596061208	2769	8003.6117707202	12948.936199581	16022.4523227655	0	0	0	0	0	0	0	0	0	0	0	0	1	3.6946669588	6.0024834787	7.1010715532
acetyltransferase	BBa_K1554003	1..1092		146	681.101960273	1118.0750676891	1046.459440216	194	923.6063304168	1478.5556782277	1482.2587657973	159	785.4883022118	1279.6092165954	1211.2483756668	178	700.4162140719	1143.5496021447	1126.4108075605	334	1387.356635176	2117.5904539288	2085.0810647589	324	1070.43544521	1634.0451986802	1706.2580642443	276	1132.8826529117	1682.6186055438	2014.128190778	383	1469.6526324433	2333.0336551183	2396.3533715653	456	2204.6249318017	3257.3285488925	2850.4592052834	435	2465.7186879574	3814.6326548928	2970.436668213	443	2263.6240942642	3499.0229758245	3128.0238645234	500	1787.7659258908	2800.4002157991	2674.8053639289	182	691.2674942521	1093.1399030785	1069.8794828951	196	841.603895039	1346.2305876875	1268.6601337246	287	1310.4986926976	2066.7994967428	2105.3791494146	301	1087.525795859	1759.4934074006	1741.6966952519	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Putative TUBA1 gene	Niben044Scf00006458Ctg010_7730-12016	1..4287		40146	151156.3500311626	248133.4016789228	287747.6759377499	36269	139362.3927495744	223098.3594907611	277113.6246221851	37773	150608.3039612651	245350.2786763082	287751.4773211374	43325	137594.0334933318	224645.8592728177	274167.1249301125	46069	154445.5059856073	235737.7482004415	287597.6035101188	54639	145694.465754161	222406.0715713432	287741.4641118626	49404	163667.6322242009	243088.0218687591	360528.9461492551	45939	142272.9386427628	225854.4275964835	287431.0118442264	45935	179241.4441212545	264828.8444255886	287140.0078830965	42090	192556.4352305756	297897.7566774966	287415.3548622613	40706	167874.1596889149	259493.4129245	287425.1454385782	53753	155120.1444809105	242983.9834108417	287557.625454545	41076	125917.9760261628	199121.1293075563	241463.5694472503	34627	120002.7985288898	191956.6187133771	224132.1145432685	39177	144381.2221490679	227704.9484593837	287395.2576188702	46102	134436.6493330521	217503.2529023451	266763.1263936926	19984	57417.9670605041	131423.7171889264	140962.3725395272	41801	140521.4592985969	227865.351936426	261304.7185466991	45951	151705.480800001	245565.3800045729	288196.0872815189	40440	150737.4966209864	244893.340363464	287167.333613162
Putative RNL-gene CDS	Niben101Scf04639_1222484-1264848	1..42365		385	560.6900344972	920.4107238536	2759.4992087888	400	594.4947114494	951.6971704742	3056.2036408193	361	556.7402659409	906.964462159	2750.0670667654	433	531.8962376525	868.4118367473	2740.0892116501	477	618.5329799723	944.0972138093	2977.7954128444	526	542.5053789511	828.1473803023	2770.0362401003	232	297.2806643333	441.5373256798	1693.0352907989	514	615.7180356391	977.4356657471	3215.9938198031	594	896.5182816016	1324.603814073	3713.0981753033	483	854.6813626844	1322.2495540743	3298.2089902227	459	732.1770308734	1131.7710656503	3240.9998957477	571	637.3523518025	998.3642923714	3054.6277256069	278	329.6266953724	521.2571064423	1634.2115178288	358	479.8853868551	767.6252334107	2317.2465707826	443	631.48240566	995.9166884276	3249.7664222671	408	460.1888245431	744.5333306357	2360.8380453912	23	25.5606102514	58.5055616706	162.2365176346	368	478.499832291	775.9208681062	2300.4266985284	339	432.8964195329	700.7286302685	2126.1446668938	368	530.5617800929	861.9689825607	2613.1943315936
Putative THI1 gene	Niben101Scf11490_32963-37724	1..4762		89586	424930.3757086335	697552.0352241134	642110.3795287018	91861	444666.7915553923	711845.0663680299	701864.8066232471	86320	433583.1399086397	706333.856819032	657578.363443745	110928	443808.6153603295	724593.6849080916	701969.0902307563	90994	384302.104143767	586579.1437659935	568053.4922355544	111650	375052.9239482025	572527.2199934825	587974.4224471432	90764	378798.1321718015	562611.4790436142	662356.2721296047	108420	423003.2292913935	671506.142590888	678361.9648697409	73633	361960.1203544314	534795.2917449423	460280.4005759452	58864	339251.9848753922	524845.6387435235	401958.1242245699	72601	377191.1908636782	583047.6210493013	512635.8026823126	114407	415921.7251796374	651509.9499774814	612032.9145420373	122576	473367.6222091996	748562.6634623164	720557.9532711596	108470	473565.0712024971	757515.2490040183	702099.8199239996	94210	437391.2151267441	689813.6933222067	691107.2113810083	121334	445732.133010724	721144.0431898496	702083.1455870093	104832	379448.4450160592	868517.777249403	739459.9398550697	112316	475653.9670326859	771306.0990033599	702105.2311736813	111954	465628.3712140401	753711.7796609317	702154.5723817798	98860	464220.454960088	754188.5756937483	702011.9337536399
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Created: 10th Apr 2022 at 16:45

Last updated: 21st Sep 2022 at 10:46

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Version 1 (earliest) Created 10th Apr 2022 at 16:45 by Marko Petek

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