Salmon feed switch experiment: Lipidomic data (POS mode) of muscle tissue samples.
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Created: 21st Jun 2019 at 15:56
Last updated: 20th Aug 2021 at 10:23
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Version 1 (earliest) Created 21st Jun 2019 at 15:56 by Zdenka Bartosova
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Atlantic salmon is a main source of essential ω-3 long-chain polyunsaturated fatty acids (LC-PUFA) in many Western diets, especially eicosapentaenoic acid (20:5n-3, EPA) and docosahexaenoic acid (22:6n-3, DHA). However, farmed salmon meat now contains less healthy ω-3 fatty acids (FA) than before, due to the shift from marine to vegetable lipid feed sources. An important future aquaculture challenge is therefore to maintain a healthy and high EPA/DHA content when farmed salmon is fed a vegetable ...
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Studies: GSF1: Salmon feed-switch experiment vegetable and fish oil 2015-2016
Assays: Fatty acid contents in feed using Gas chromatography/FAME analysis, Fatty acid contents in tissues using Gas chromatography/FAME analysis, Feed switch 2015-09 Solbergstranda, pilot proteomics, Feed switch 2015-09, 2016-01 Solbergstranda, gross phenotypes, Feed switch 2015-09, 2016-01 Solbergstranda, gut microbiota composition,..., Lipidomics, Metabolomics, Overview of RNAseq datasets in GenoSysFat, RNA sequencing Feed switch- Liver and Gut
Snapshots: No snapshots
This experiment is designed to pinpoint where in the metabolic network there are differences between salmon of different genetic families and on different diets. Analyses of this material will help inform feeding and breeding strategies.
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Snapshots: Snapshot 1
Lipidomic analysis by UPC2-MS of tissue samples from the GSF1 feed-switch experiment. Samples were analyzed at NTNU by Zdenka Bartosova and Per Bruheim.
There are three separate data files of lipid analysis in muscle, liver and gut tissue samples. Excel sheets contains both raw and normalised data of compounds abundance. Normalization to all compounds was used as a normalization method.
Columns: Compound 0.93_858.7669n Anova (p) 0,044998264 q Value 0,009417222 Max Fold Change 1,644961431 Maximum ...
Submitter: Zdenka Bartosova
Assay type: Experimental Assay Type
Technology type: Supercritical fluid chromatography - Mass spectrometry
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SOPs: No SOPs
Data files: Lipid Class Quantitation- POS Gut SW+FW, Lipid Class Quantitation- POS Liver SW+FW, Lipid Class Quantitation- POS Muscle SW+FW, Lipid identification- POS Gut, Lipid identification- POS Liver, Lipid identification- POS Muscle, POS Gut tissue FW+SW, POS Liver tissue FW+SW, POS Muscle tissue FW+SW
Snapshots: No snapshots