ZucAt: the model documentation Version 2
The ASCII file includes complete information on used transformers / compounds / genes and their inter-connection in the model. The Transformer information includes: Identifier name, Trivial name, Stoichiometric equation, Compartment, EC number, Pathway, Associated genes). The Compound information includes: Identifier name, Trivial name, Kegg ID, Compartment. The Gene information includes: ATG code of the genes whose products participate in transformations accounted in the model, Association with Identifier name of the Transformer.
SEEK ID: https://fairdomhub.org/data_files/1337?version=2
Filename:
Arabidopsis_thaliana_model_documentation.txt
Format: Plain text document
Size: 269 KB
Model Name: sugar transport Arabidopsis thaliana Date: Apr 8, 2014 1:24:14 PM -------------------- REACTIONS -------------------- Identifier : ACL Trivial Name : ATP citrate lyase Equation : 1*Isocitrate + 1*CoA + 1*ATP => 1*Acetyl-CoA + 1*ADP + 1*Orthophosphate + 1*Oxaloacetate Compartment : mesophyll EC Number : 2.3.3.8 Pathway : Acetyl-CoA biosynthesis III (from cirate) Genes : AT5G49460.1 / AT1G60810.1 / AT1G10670.1 / AT1G10670.2 / AT1G10670.3 / AT1G10670.4 / AT1G09430.1 / AT3G06650.1 Identifier : ACL_root Trivial Name : ATP citrate lyase Equation : 1*Isocitrate + 1*CoA + 1*ATP => 1*Acetyl-CoA + 1*ADP + 1*Orthophosphate + 1*Oxaloacetate Compartment : root EC Number : 2.3.3.8 Pathway : Acetyl-CoA biosynthesis III (from cirate) Genes : AT5G49460.1 / AT1G60810.1 / AT1G10670.1 / AT1G10670.2 / AT1G10670.3 / AT1G10670.4 / AT1G09430.1 / AT3G06650.1 Identifier : ACOL Trivial Name : acetate-CoA ligase Equation : 1*Acetate + 1*CoA + 1*ATP + 1*H2O => 1*Acetyl-CoA + 1*AMP + 2*Orthophosphate + 1*h Compartment : mesophyll EC Number : 6.2.1.1 Pathway : Pyruvate fermentation to ethanol Genes : AT5G23050.1 / AT1G55320.1 / AT5G36880.1 / AT1G55320.2 / AT3G16910.1 / AT5G36880.2 Identifier : ACOL_root Trivial Name : acetate-CoA ligase Equation : 1*Acetate + 1*CoA + 1*ATP + 1*H2O => 1*Acetyl-CoA + 1*AMP + 2*Orthophosphate + 1*h Compartment : root EC Number : 6.2.1.1 Pathway : Pyruvate fermentation to ethanol Genes : AT5G23050.1 / AT1G55320.1 / AT5G36880.1 / AT1G55320.2 / AT3G16910.1 / AT5G36880.2 Identifier : ADG_plastid Trivial Name : ADP-glucose pyrophosphorylase Equation : D-Glucose_1-phosphate + ATP + H2O => ADP-Glucose + 2*Orthophosphate Compartment : plastid EC Number : 2.7.7.27 Pathway : Starch biosynthesis Genes : AT5G48300.1 / AT1G05610.1 / AT2G21590.1 / AT2G21590.2 / AT5G19220.1 / AT4G39210.1 / AT1G27680.1 Identifier : ADK Trivial Name : adenylate kinase Equation : 1*AMP + 1*ATP = 2*ADP Compartment : mesophyll EC Number : 2.7.4.3 Pathway : Adenosine nucleotides de novo biosynthesis Genes : AT5G26667.1 / AT5G63400.1 / AT5G35170.1 / AT3G01820.1 / AT3G60180.2 / AT5G60340.1 / AT5G47840.1 / AT5G50370.1 / AT2G39270.1 / AT4G25280.1 / AT5G63400.2 / AT5G35170.2 / AT3G60180.1 / AT5G26667.3 / AT5G26667.2 / AT2G37250.1 Identifier : ADK_plastid Trivial Name : adenylate kinase Equation : 1*AMP + 1*ATP = 2*ADP Compartment : plastid EC Number : 2.7.4.3 Pathway : Adenosine nucleotides de novo biosynthesis Genes : AT5G26667.1 / AT5G63400.1 / AT5G35170.1 / AT3G01820.1 / AT3G60180.2 / AT5G60340.1 / AT5G47840.1 / AT5G50370.1 / AT2G39270.1 / AT4G25280.1 / AT5G63400.2 / AT5G35170.2 / AT3G60180.1 / AT5G26667.3 / AT5G26667.2 / AT2G37250.1 Identifier : ADP_root Trivial Name : adenylate kinase Equation : 1*AMP + 1*ATP = 2*ADP Compartment : root EC Number : 2.7.4.3 Pathway : Adenosine nucleotides de novo biosynthesis_root Genes : AT5G26667.1 / AT5G63400.1 / AT5G35170.1 / AT3G01820.1 / AT3G60180.2 / AT5G60340.1 / AT5G47840.1 / AT5G50370.1 / AT2G39270.1 / AT4G25280.1 / AT5G63400.2 / AT5G35170.2 / AT3G60180.1 / AT5G26667.3 / AT5G26667.2 / AT2G37250.1 Identifier : AGT Trivial Name : serine:glyxylate aminotransferase Equation : Glyoxylate + L-Serine => Glycine + 3-Hydroxypyruvate Compartment : mesophyll EC Number : 2.6.1.45 Pathway : Photorespiration Genes : AT2G13360.1 Identifier : AICAR Equation : 1*PRPP + 2*L-Glutamine + 1*Glycine + 5*ATP + 1*L-Aspartate + 1*5-Formyltetrahydrofolate + 4*H2O + 1*CO2 => 1*AICAR + 5*ADP + 7*Orthophosphate + 2*L-Glutamate + 1*Tetrahydrofolate + 1*Fumarate + 9*h Compartment : mesophyll Pathway : Inosine-5'-phosphate biosynthesis II Genes : AT4G38880.1 / AT4G34740.1 / AT2G16570.1 / AT1G09830.1 / AT1G31220.1 / AT1G74260.1 / AT3G55010.2 / AT3G55010.1 / AT2G37690.1 / AT3G21110.1 / AT3G21110.2 / AT1G36280.1 / AT1G36280.2 / AT4G18440.1 Identifier : AICAR_root Equation : 1*PRPP + 2*L-Glutamine + 1*Glycine + 5*ATP + 1*L-Aspartate + 1*5-Formyltetrahydrofolate + 4*H2O + 1*CO2 => 1*AICAR + 5*ADP + 7*Orthophosphate + 2*L-Glutamate + 1*Tetrahydrofolate + 1*Fumarate + 9*h Compartment : root Pathway : Inosine-5'-phosphate biosynthesis II Genes : AT4G38880.1 / AT4G34740.1 / AT2G16570.1 / AT1G09830.1 / AT1G31220.1 / AT1G74260.1 / AT3G55010.2 / AT3G55010.1 / AT2G37690.1 / AT3G21110.1 / AT3G21110.2 / AT1G36280.1 / AT1G36280.2 / AT4G18440.1 Identifier : ALA Trivial Name : alanine transaminase Equation : 1*Pyruvate + 1*L-Glutamate = 1*L-Alanine + 1*2-Oxoglutarate Compartment : mesophyll EC Number : 2.6.1.2 Pathway : Amino acid synthesis Genes : AT1G70580.3 / A1G70580.2 / AT1G70580.4 / AT1G23310.2 / AT1G72330.1 / AT1G72330.2 Identifier : ALA_root Trivial Name : alanine transaminase Equation : 1*Pyruvate + 1*L-Glutamate = 1*L-Alanine + 1*2-Oxoglutarate Compartment : root EC Number : 2.6.1.2 Pathway : Amino acid synthesis_root Genes : AT1G70580.3 / A1G70580.2 / AT1G70580.4 / AT1G23310.2 / AT1G72330.1 / AT1G72330.2 Identifier : AL_plastid Trivial Name : aldehyde lyase Equation : Glycerone-phosphate + D-Erythrose_4-phosphate => Sedoheptulose_1,7-bisphosphate Compartment : plastid EC Number : 4.1.2. Pathway : Calvin-Benson-Bassham cycle Identifier : AMP Equation : 1*IMP + 1*L-Aspartate + 1*ATP => 1*AMP + 1*ADP + 1*Orthophosphate + 1*Fumarate + 1*h Compartment : mesophyll Pathway : Purine nucleotides de novo biosynthesis II Identifier : AMP_root Equation : 1*IMP + 1*L-Aspartate + 1*ATP => 1*AMP + 1*ADP + 1*Orthophosphate + 1*Fumarate + 1*h Compartment : root Pathway : Purine nucleotides de novo biosynthesis II Identifier : APS Trivial Name : sulfate adenyltrasferase Equation : Sulfate + ATP + H2O => APS + 2*Orthophosphate + h Compartment : plastid EC Number : 2.7.7.4 Pathway : Sulfate reduction II Genes : AT3G22890.1 / AT1G19920.1 / AT4G14680.1 / AT5G43780.1 Identifier : APS_reductase Trivial Name : APS reductase Equation : APS + NADPH => NADP + AMP + Sulfite Compartment : plastid EC Number : 1.8.4.9 Pathway : Sulfate reduction II Genes : AT4G04610.1 / AT4G21990.1 / AT1G62180.1 Identifier : ARG Equation : 1*L-Ornithine + 1*Carbamoyl_phosphate + 1*L-Aspartate + 1*ATP + 1*H2O = 1*L-Arginine + 1*Fumarate + 1*AMP + 3*Orthophosphate + 4*h Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT1G75330.1 / AT4G24830.1 / AT4G24830.2 / AT5G10920.1 Identifier : ARG_root Equation : 1*L-Ornithine + 1*Carbamoyl_phosphate + 1*L-Aspartate + 1*ATP + 1*H2O = 1*L-Arginine + 1*Fumarate + 1*AMP + 3*Orthophosphate + 4*h Compartment : root Pathway : Amino acid synthesis Genes : AT1G75330.1 / AT4G24830.1 / AT4G24830.2 / AT5G10920.1 Identifier : ASN Trivial Name : asparagine synthase Equation : 1*L-Aspartate + 1*L-Glutamine + 1*ATP + 2*H2O => 1*L-Asparagine + 2*h + 1*AMP + 2*Orthophosphate + 1*L-Glutamate Compartment : mesophyll EC Number : 6.3.5.4 Pathway : Amino acid synthesis Genes : AT5G10240.2 / AT5G65010.1 / AT3G47340.2 / AT3G47340.3 Identifier : ASN_root Trivial Name : asparagine synthase Equation : 1*L-Aspartate + 1*L-Glutamine + 1*ATP + 2*H2O => 1*L-Asparagine + 2*h + 1*AMP + 2*Orthophosphate + 1*L-Glutamate Compartment : root EC Number : 6.3.5.4 Pathway : Amino acid synthesis Genes : AT5G10240.2 / AT5G65010.1 / AT3G47340.2 / AT3G47340.3 Identifier : ASP Trivial Name : aspartate transaminase Equation : 1*Oxaloacetate + 1*L-Glutamate = 1*L-Aspartate + 1*2-Oxoglutarate Compartment : mesophyll EC Number : 2.6.1.1 Pathway : Amino acid synthesis Genes : AT2G22250.2 / AT1G80360.1 / AT1G62800.2 / AT2G30970.2 / AT1G62800.1 / AT2G22250.1 / AT2G22250.3 / AT4G31990.4 / AT4G31990.1 / AT4G31990.2 Identifier : ASP_root Trivial Name : aspartate transaminase Equation : 1*Oxaloacetate + 1*L-Glutamate = 1*L-Aspartate + 1*2-Oxoglutarate Compartment : root EC Number : 2.6.1.1 Pathway : Amino acid synthesis_root Genes : AT2G22250.2 / AT1G80360.1 / AT1G62800.2 / AT2G30970.2 / AT1G62800.1 / AT2G22250.1 / AT2G22250.3 / AT4G31990.4 / AT4G31990.1 / AT4G31990.2 Identifier : Aldo Trivial Name : fructose-bisphosphate aldolase Equation : D-Fructose_1,6-bisphosphate = Glycerone-phosphate + D-Glyceraldehyde_3-phosphate Compartment : mesophyll EC Number : 4.1.2.13 Pathway : Glycolysis Genes : AT2G36460.1 / AT3G52930.1 / AT5G03690.1 / AT2G01140.1 / AT4G26530.1 / AT4G26520.1 / AT2D36460.2 / AT4G26530.2 / AT5G03690.2 Identifier : Aldo_plastid Trivial Name : fructose-bisphosphate aldolase Equation : Glycerone-phosphate + D-Glyceraldehyde_3-phosphate = D-Fructose_1,6-bisphosphate Compartment : plastid EC Number : 4.1.2.13 Pathway : Calvin-Benson-Bassham cycle Genes : AT2G36460.1 / AT2G21330.1 / AT2G21330.2 / AT2G21330.3 / AT4G38970.1 / AT4G38970.2 / AT3G52930.1 / AT5G03690.1 / AT5G03690.2 / AT2G36460.2 / AT4G26530.1 / AT4G26530.2 / AT4G26520.1 / AT2G01140.1 Identifier : Aldo_root Trivial Name : fructose-bisphosphate aldolase Equation : D-Fructose_1,6-bisphosphate = Glycerone-phosphate + D-Glyceraldehyde_3-phosphate Compartment : root EC Number : 4.1.2.13 Pathway : Glycolysis Genes : AT2G36460.1 / AT3G52930.1 / AT5G03690.1 / AT2G01140.1 / AT4G26530.1 / AT4G26520.1 / AT2D36460.2 / AT4G26530.2 / AT5G03690.2 Identifier : BAM Trivial Name : beta-amylase Equation : 6-Phosphogluco-amylopectin + 49*H2O => Orthophosphate + 50*alpha-Maltose Compartment : plastid EC Number : 3.2.1 Pathway : Starch degradation Genes : AT5G26570.1 / AT5G26570.2 / AT3G52180.1 / AT2G32290.1 / AT5G18670.1 / AT3G23920.1 / AT5G45300.1 / AT5G45300.2 / AT5G55700.1 / AT5G55700.2 / AT4G00490.1 / AT2G45880.1 / AT4G15210.1 / AT4G15210.2 / AT4G17090.1 Identifier : CAT Trivial Name : catalase Equation : 2*H2O2 => 2*H2O + O2 Compartment : mesophyll EC Number : 1.11.1.6 Pathway : Photorespiration Identifier : CIS_mitochondria Trivial Name : isocitrate synthase (lumped: citrate synthase (CIS) + aconitase (ACO)) Equation : 1*Oxaloacetate + 1*Acetyl-CoA + 1*H2O => 1*Isocitrate + 1*CoA + 1*h Compartment : Mitochondria_mesophyll EC Number : 2.3.3.1 Pathway : TCA cycle Genes : AT3G58740.1 / AT3G60100.1 / AT2G44350.1 / AT2G44350.2 / AT3G58750.1 / AT2G42790.1 / AT5G54950.1 / AT4G35830.2 / AT4G35830.1 / AT4G26970.1 / AT2G05710.1 Identifier : CIS_mitochondria_root Trivial Name : isocitrate synthase (lumped: citrate synthase (CIS) + aconitase (ACO)) Equation : 1*Oxaloacetate + 1*Acetyl-CoA + 1*H2O => 1*Isocitrate + 1*CoA + 1*h Compartment : Mitochondria_root EC Number : 2.3.3.1 Pathway : TCA cycle Genes : AT3G58740AT3G58740.1 / AT3G60100.1 / AT2G44350.1 / AT2G44350.2 / AT3G58750.1 / AT2G42790.1 / AT5G54950.1 / AT4G35830.2 / AT4G35830.1 / AT4G26970.1 / AT2G05710.1 Identifier : CMP Equation : 1*CTP + 2*ADP = 1*CMP + 2*ATP Compartment : mesophyll EC Number : 3.6.1.5 Pathway : Pyrimidine ribonucleotides interconversion Genes : AT1G14240.1 / AT1G14240.2 / AT1G14240.3 / AT1G14240.4 / AT1G14230.1 / AT1G14250.1 / AT2G02970.1 / AT4G19180.1 Identifier : CMP_root Equation : 1*CTP + 2*ADP = 1*CMP + 2*ATP Compartment : root EC Number : 3.6.1.5 Pathway : Pyrimidine ribonucleotides interconversion Genes : AT1G14240.1 / AT1G14240.2 / AT1G14240.3 / AT1G14240.4 / AT1G14230.1 / AT1G14250.1 / AT2G02970.1 / AT4G19180.1 Identifier : CPS Trivial Name : carbamoylphosphate synthase Equation : 2*ATP + 1*NH4 + 1*CO2 + 1*H2O => 1*Carbamoyl_phosphate + 2*ADP + 2*h + 1*Orthophosphate Compartment : mesophyll EC Number : 6.3.4.16 Pathway : Urea cycle Genes : AT1G29900.1 / AT3G27740.1 Identifier : CPS_root Trivial Name : carbamoylphosphate synthase Equation : 2*ATP + 1*NH4 + 1*CO2 + 1*H2O => 1*Carbamoyl_phosphate + 2*ADP + 2*h + 1*Orthophosphate Compartment : root EC Number : 6.3.4.16 Pathway : Urea cycle Genes : AT1G29900.1 / AT3G27740.1 Identifier : CTP Trivial Name : CTP synthase Equation : 1*UTP + 1*L-Glutamine + 1*ATP + 1*H2O => 1*CTP + 1*ADP + 1*Orthophosphate + 2*h + 1*L-Glutamate Compartment : mesophyll EC Number : 6.3.4.2 Pathway : Pyrimidine ribonucleotides interconversion Genes : AT4G20320.1 / AT2G34890.1 / AT1G30820.1 / AT3G12670.1 / AT4G02120.1 / AT4G20320.2 Identifier : CTP_root Trivial Name : CTP synthase Equation : 1*UTP + 1*L-Glutamine + 1*ATP + 1*H2O => 1*CTP + 1*ADP + 1*Orthophosphate + 2*h + 1*L-Glutamate Compartment : root EC Number : 6.3.4.2 Pathway : Pyrimidine ribonucleotides interconversion Genes : AT4G20320.1 / AT2G34890.1 / AT1G30820.1 / AT3G12670.1 / AT4G02120.1 / AT4G20320.2 Identifier : CYS Equation : 1*L-Serine + 1*Acetyl-CoA + 1*H2S = 1*L-Cysteine + 1*CoA + 1*Acetate + 1*h Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT1G07920.1 / AT1G07940.1 / AT1G07940.2 / AT1G07930.2 / AT1G07930.1 / AT5G60390.1 / AT5G60390.2 / AT5G60390.3 / AT3G13110.1 / AT1G55920.1 / AT5G56760.1 / AT4G35640.1 / AT2G17640.1 / AT1G55880.1 / AT5G28030.2 / AT5G28020.1 / AT5G28030.1 / AT2G43750.2 / AT5G28020.2 / AT3G59760.2 / AT3G59760.3 / AT5G28020.6 / AT4G14880.3 / AT4G14880.2 / AT4G14880.4 / AT5G28020.5 / AT5G28020.4 / AT5G28020.3 / AT3G22460.1 / AT4G14880.1 / AT2G43750.1 / AT3G59760.1 / AT3G04940.1 / AT3G03630.1 Identifier : CYS_root Equation : 1*L-Serine + 1*Acetyl-CoA + 1*H2S = 1*L-Cysteine + 1*CoA + 1*Acetate + 1*h Compartment : root Pathway : Amino acid synthesis Genes : AT1G07920.1 / AT1G07940.1 / AT1G07940.2 / AT1G07930.2 / AT1G07930.1 / AT5G60390.1 / AT5G60390.2 / AT5G60390.3 / AT3G13110.1 / AT1G55920.1 / AT5G56760.1 / AT4G35640.1 / AT2G17640.1 / AT1G55880.1 / AT5G28030.2 / AT5G28020.1 / AT5G28030.1 / AT2G43750.2 / AT5G28020.2 / AT3G59760.2 / AT3G59760.3 / AT5G28020.6 / AT4G14880.3 / AT4G14880.2 / AT4G14880.4 / AT5G28020.5 / AT5G28020.4 / AT5G28020.3 / AT3G22460.1 / AT4G14880.1 / AT2G43750.1 / AT3G59760.1 / AT3G04940.1 / AT3G03630.1 Identifier : Chor Equation : 2*Phosphoenolpyruvate + 1*D-Erythrose_4-phosphate + 1*NADPH + 1*ATP => 1*Chorismate + 1*ADP + 4*Orthophosphate + 1*NADP Compartment : mesophyll Pathway : Chorismate biosynthesis I Genes : AT1G22410.1 / AT4G33510.2 / AT4G33510.1 / AT4G39980.1 / AT5G66120.2 / AT5G66120.1 / AT3G06350.1 / AT3G26900.1 / AT3G26900.2 / AT3G26900.3 / AT4G39540.2 / AT4G39540.1 / AT2G21940.5 / AT2G21940.1 / AT2G21940.2 / AT2G21940.3 / AT2G21940.4 / AT4G39540.3 / AT1G48860.1 / AT1G48860.2 / AT2G45300.1 / AT1G48850.1 / AT1G48850.2 / AT1G48850.3 Identifier : Chor_root Equation : 2*Phosphoenolpyruvate + 1*D-Erythrose_4-phosphate + 1*NADPH + 1*ATP => 1*Chorismate + 1*ADP + 4*Orthophosphate + 1*NADP Compartment : root Pathway : Chorismate biosynthesis I Identifier : ENO Trivial Name : Enolase Equation : D-Glycerate_2-phosphate = Phosphoenolpyruvate + H2O Compartment : mesophyll EC Number : 4.2.1.11 Pathway : Glycolysis Genes : AT2G36530.1 / AT2G29560.1 / AT1G74030.1 Identifier : ENO_root Trivial Name : Enolase Equation : D-Glycerate_2-phosphate = Phosphoenolpyruvate + H2O Compartment : root EC Number : 4.2.1.11 Pathway : Glycolysis Genes : AT2G36530.1 / AT2G29560.1 / AT1G74030.1 Identifier : FBP Trivial Name : fructose 1,6-bisphosphatase Equation : D-Fructose_1,6-bisphosphate + H2O => D-Fructose_6-phosphate + Orthophosphate Compartment : mesophyll EC Number : 3.1.3.11 Pathway : Glycolysis Genes : AT5G64380.1 / AT3G54050.2 Identifier : FBP_plastid Trivial Name : fructose 1,6-bisphosphatase Equation : D-Fructose_1,6-bisphosphate + H2O => D-Fructose_6-phosphate + Orthophosphate Compartment : plastid EC Number : 3.1.3.11 Pathway : Calvin-Benson-Bassham cycle Genes : AT5G64380.1 / AT3G54050.2 / AT3G54050.1 Identifier : FF_root Trivial Name : beta-fructofuranosidase Equation : Sucrose + H2O => D-Glucose + beta-D-Fructofuranose Compartment : root EC Number : 3.2.1.26 Pathway : Sucrose degradation Genes : AT1G55120.1 / AT1G62660.1 / AT3G52600.1 / AT3G13784.1 / AT3G13790.2 / AT1G55120.2 / AT1G55120.3 / AT3G52600.2 / AT3G13790.1 / AT1G12240.1 / AT2G36180.1 / AT5G22510.1 / AT4G09510.1 / AT1G56560.1 / AT1G35580.1 Identifier : FK_root Trivial Name : fructokinase Equation : beta-D-Fructofuranose + ATP => D-Fructose_6-phosphate + ADP + h Compartment : root EC Number : 2.7.1.4 Pathway : Sucrose degradation Genes : AT4G37840.1 / AT3G20040.1 / AT1G50460.1 / AT1G47840.1 / AT2G19860.1 / AT3G54090.1 / AT1G66430.1 / AT1G69200.1 / AT4G10260.1 / AT1G06030.1 / AT3G59480.1 / AT2G31390.1 / AT5G51830.1 / AT1G50390.1 / AT1G06020.1 / AT4G29130.1 Identifier : FNR Trivial Name : ferredoxin-NADP+ oxidoreductase Equation : 2*Fd_red + NADP + h = 2*Fd_ox + NADPH Compartment : plastid EC Number : 1.18.1.2 Pathway : Photosynthesis light reactions Identifier : FQR Trivial Name : ferredoxin-plastoquinone reductase Equation : 2*Fd_red + Plastoquinone + 2*h => 2*Fd_ox + Plastoquinol Compartment : plastid Pathway : Photosynthesis light reactions Identifier : FUM Trivial Name : fumarase Equation : 1*Fumarate + 1*H2O => 1*L-Malate Compartment : Mitochondria_mesophyll EC Number : 4.2.1.2 Pathway : TCA cycle Genes : AT5G50950.1 / AT5G50950.2 / AT5G50950.3 / AT2G47510.1 / AT2G47510.2 Identifier : FUM_root Trivial Name : fumarase Equation : 1*Fumarate + 1*H2O => 1*L-Malate Compartment : Mitochondria_root EC Number : 4.2.1.2 Pathway : TCA cycle Genes : AT5G50950.1 / AT5G50950.2 / AT5G50950.3 / AT2G47510.1 / AT2G47510.2 Identifier : Formyl Equation : 5-Formyltetrahydrofolate + ADP + Orthophosphate + NAD = Tetrahydrofolate + ATP + NADH + CO2 Compartment : mesophyll Pathway : Folate transformations II Identifier : Formyl_root Equation : 5-Formyltetrahydrofolate + ADP + Orthophosphate + NAD = Tetrahydrofolate + ATP + NADH + CO2 Compartment : root Pathway : Folate transformations II Identifier : G6PDH Trivial Name : glucose-6-phosphate 1-dehydrogenase Equation : D-Glucose_6-phosphate + NADP => D-Glucono-1,5-lactone_6-phosphate + NADPH + h Compartment : mesophyll EC Number : 1.1.1.49 Pathway : Pentose phosphate pathway Genes : AT1G09420.2 / AT3G27300.1 / AT3G27300.2 / AT3G27300.3 / AT1G09420.1 / AT5G35790.1 / AT5G13110.1 / AT5G40760.1 / AT1G24280.1 Identifier : G6PDH_plastid Trivial Name : glucose-6-phosphate 1-dehydrogenase Equation : D-Glucose_6-phosphate + NADP => D-Glucono-1,5-lactone_6-phosphate + NADPH + h Compartment : plastid EC Number : 1.1.1.49 Pathway : Pentose phosphate pathway Genes : AT1G09420.2 / AT3G27300.1 / AT3G27300.2 / AT3G27300.3 / AT1G09420.1 / AT5G35790.1 / AT5G13110.1 / AT5G40760.1 / AT1G24280.1 Identifier : G6PDH_root Trivial Name : glucose-6-phosphate 1-dehydrogenase Equation : D-Glucose_6-phosphate + NADP => D-Glucono-1,5-lactone_6-phosphate + NADPH + h Compartment : root EC Number : 1.1.1.49 Pathway : Pentose phosphate pathway Genes : AT1G09420.2 / AT3G27300.1 / AT3G27300.2 / AT3G27300.3 / AT1G09420.1 / AT5G35790.1 / AT5G13110.1 / AT5G40760.1 / AT1G24280.1 Identifier : GAPDH Trivial Name : glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) Equation : D-Glyceraldehyde_3-phosphate + Orthophosphate + NAD => 1,3-bisphospho-D-Glycerate + NADH + h Compartment : mesophyll EC Number : 1.2.1.12 Pathway : Glycolysis Genes : AT1G32060.1 / AT1G13440.1 / AT1G13440.2 / AT3G62410.1 / AT2G47400.1 / AT1G12900.1 / AT1G12900.4 / AT3G26650.1 / AT1G12900.3 / AT1G42970.1 / AT3G04120.1 / AT1G79530.1 Identifier : GAPDH_plastid Trivial Name : Glyceraldehyde-3-phosphate dehydrogenase Equation : 1,3-bisphospho-D-Glycerate + NADPH + h => NADP + Orthophosphate + D-Glyceraldehyde_3-phosphate Compartment : plastid EC Number : 1.2.1.13 Pathway : Calvin-Benson-Bassham cycle Genes : AT1G12900.4 / AT1G12900.3 / AT1G12900.2 / AT1G12900.1 / AT1G42970.1 Identifier : GAPDH_root Trivial Name : glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) Equation : D-Glyceraldehyde_3-phosphate + Orthophosphate + NAD => 1,3-bisphospho-D-Glycerate + NADH + h Compartment : root EC Number : 1.2.1.12 Pathway : Glycolysis Genes : AT1G32060.1 / AT1G13440.1 / AT1G13440.2 / AT3G62410.1 / AT2G47400.1 / AT1G12900.1 / AT1G12900.4 / AT3G26650.1 / AT1G12900.3 / AT1G42970.1 / AT3G04120.1 / AT1G79530.1 Identifier : GAT Trivial Name : glyoxylate aminotransferase Equation : Glyoxylate + L-Glutamate => Glycine + 2-Oxoglutarate Compartment : mesophyll EC Number : 2.6.1.4 Pathway : Photorespiration Genes : AT2G13360.1 / AT1G23310.1 / AT1G70580.1 Identifier : GDC Trivial Name : glycine decarboxylase Equation : Glycine + Tetrahydrofolate + NAD => CO2 + NADH + 5,10-Methylenetetrahydrofolate + NH4 Compartment : mesophyll Pathway : Photorespiration Genes : AT1G32470.1 / AT2G35370.1 / AT2G35120.1 Identifier : GDH Trivial Name : glutamate dehydrogenase Equation : L-Glutamate + NAD + H2O => 2-Oxoglutarate + NH4 + NADH + h Compartment : mesophyll EC Number : 1.4.1.2 Pathway : Amino acid synthesis Genes : AT5G07440.1 / AT5G18170.1 / AT5G07440.3 / AT5G07440.2 / AT3G03910.1 Identifier : GDH_root Trivial Name : glutamate dehydrogenase Equation : L-Glutamate + NAD + H2O => 2-Oxoglutarate + NH4 + NADH + h Compartment : root EC Number : 1.4.1.2 Pathway : Amino acid synthesis Genes : AT5G07440.1 / AT5G18170.1 / AT5G07440.3 / AT5G07440.2 / AT3G03910.1 Identifier : GHMT Trivial Name : glycine hydroxymethyltransferase, serine hydroxymethyltransferase Equation : 1*L-Serine + 1*Tetrahydrofolate = 1*Glycine + 1*5,10-Methylenetetrahydrofolate + 1*H2O Compartment : mesophyll EC Number : 2.1.2.1 Pathway : Amino acid synthesis / Photorespiration / Folate transformations II Genes : AT3G04520.1 / AT1G08630.1 / AT4G13890.1 / AT1G36370.1 / AT4G32520.1 / AT1G22020.1 / AT4G13930.1 / AT5G26780.3 / AT4G32520.2 / AT3G04520.2 / AT1G08630.2 / AT1G08630.3 / AT1G08630.4 / AT1G08630.5 / AT5G26780.1 / AT5G26780.2 / AT4G37930.1 Identifier : GHMT_root Trivial Name : glycine hydroxymethyltransferase, serine hydroxymethyltransferase Equation : 1*L-Serine + 1*Tetrahydrofolate = 1*Glycine + 1*5,10-Methylenetetrahydrofolate + 1*H2O Compartment : root EC Number : 2.1.2.1 Pathway : Amino acid synthesis / Photorespiration / Folate transformations II Genes : AT3G04520.1 / AT1G08630.1 / AT4G13890.1 / AT1G36370.1 / AT4G32520.1 / AT1G22020.1 / AT4G13930.1 / AT5G26780.3 / AT4G32520.2 / AT3G04520.2 / AT1G08630.2 / AT1G08630.3 / AT1G08630.4 / AT1G08630.5 / AT5G26780.1 / AT5G26780.2 / AT4G37930.1 Identifier : GLK Trivial Name : glucokinase Equation : D-Glucose + ATP => D-Glucose_6-phosphate + ADP + h Compartment : mesophyll EC Number : 2.7.1.2 Pathway : Sucrose biosynthesis Genes : AT4G37840.1 / AT3G20040.1 / AT1G50460.1 / AT1G47840.1 / AT2G19860.1 / AT4G29130.1 Identifier : GLK_root Trivial Name : glucokinase Equation : D-Glucose + ATP => D-Glucose_6-phosphate + ADP + h Compartment : root EC Number : 2.7.1.2 Pathway : Sucrose biosynthesis Genes : AT4G37840.1 / AT3G20040.1 / AT1G50460.1 / AT1G47840.1 / AT2G19860.1 / AT4G29130.1 Identifier : GLO Trivial Name : glycolate oxidase Equation : Glycolate + O2 => Glyoxylate + H2O2 Compartment : mesophyll EC Number : 1.1.3. Pathway : Photorespiration Identifier : GLU_plastid Trivial Name : ferredoxin-glutamate synthase Equation : 2-Oxoglutarate + L-Glutamine + 2*Fd_red => 2*L-Glutamate + 2*Fd_ox Compartment : plastid EC Number : 1.4.1.14 Pathway : Amino acid synthesis Genes : AT2G41220.1 / AT5G04140.2 / AT5G04140.1 / AT5G53460.3 / AT5G53460.2 / AT5G53460.1 Identifier : GLYK Trivial Name : glycerate kinase Equation : D-Glycerate + ATP => D-Glycerate_3-phosphate + ADP + h Compartment : plastid EC Number : 2.7.1.31 Pathway : Photorespiration Genes : AT1G80380.1 / AT1G80380.2 / AT1G80380.3 / AT1G80380.4 Identifier : GMP Equation : 1*IMP + 1*NAD + 2*ATP + 1*L-Glutamine + 3*H2O => 1*GMP + 2*ADP + 2*Orthophosphate + 1*L-Glutamate + 1*NADH + 4*h Compartment : mesophyll Pathway : Purine nucleotides de novo biosynthesis II Genes : AT1G16350.1 / AT1G79470.1 / AT1G63660.1 / AT1G63660.2 Identifier : GMP_root Equation : 1*IMP + 1*NAD + 2*ATP + 1*L-Glutamine + 3*H2O => 1*GMP + 2*ADP + 2*Orthophosphate + 1*L-Glutamate + 1*NADH + 4*h Compartment : root Pathway : Purine nucleotides de novo biosynthesis II Genes : AT1G16350.1 / AT1G79470.1 / AT1G63660.1 / AT1G63660.2 Identifier : GOGAT_root Trivial Name : glutamate synthase Equation : 2-Oxoglutarate + L-Glutamine + NADH => 2*L-Glutamate + NAD Compartment : root EC Number : 1.4.1.14 Pathway : Amino acid synthesis Genes : AT2G41220.1 / AT5G04140.2 / AT5G04140.1 / AT5G53460.3 / AT5G53460.2 / AT5G53460.1 Identifier : GPDH Trivial Name : glycerol-3-phosphate dehydrogenase Equation : 1*Glycerone-phosphate+ 1*NADH+ 1*h => 1*sn-Glycerol_3-phosphate+ 1*NAD Compartment : mesophyll EC Number : 1.1.1.94 Pathway : Glycolysis Identifier : GPDH_root Trivial Name : glycerol-3-phosphate dehydrogenase Equation : 1*Glycerone-phosphate+ 1*NADH+ 1*h => 1*sn-Glycerol_3-phosphate+ 1*NAD Compartment : root EC Number : 1.1.1.94 Pathway : Glycolysis_root Identifier : GS_plastid Trivial Name : glutamine synthetase, GLN Equation : 1*L-Glutamate + 1*NH4 + 1*ATP => 1*L-Glutamine + 1*ADP + 1*Orthophosphate Compartment : plastid EC Number : 6.3.1.2 Pathway : Amino acid synthesis Genes : AT3G53180.1 / AT5G35630.2 / AT5G35630.3 / AT1G66200.1 / AT1G66200.2 Identifier : GS_root Trivial Name : glutamine synthetase Equation : 1*L-Glutamate + 1*NH4 + 1*ATP => 1*L-Glutamine + 1*ADP + 1*Orthophosphate Compartment : root EC Number : 6.3.1.2 Pathway : Amino acid synthesis Genes : AT3G53180.1 / AT5G35630.2 / AT5G35630.3 / AT1G66200.1 / AT1G66200.2 Identifier : Glyc Equation : 1*sn-Glycerol_3-phosphate + 1*H2O = 1*Glycerol + 1*Orthophosphate Compartment : mesophyll EC Number : 3.1.3.21 Pathway : Fatty acids biosynthesis Identifier : Glyc_root Equation : 1*sn-Glycerol_3-phosphate + 1*H2O = 1*Glycerol + 1*Orthophosphate Compartment : root EC Number : 3.1.3.21 Pathway : Fatty acids biosynthesis_root Identifier : HPR Trivial Name : hydroxypyruvate reductase Equation : 3-Hydroxypyruvate + NADH + h => NAD + D-Glycerate Compartment : mesophyll EC Number : 1.1.1.29 Pathway : Photorespiration Genes : AT1G68010.1 / AT1G68010.2 / AT1G72190.1 Identifier : Hexa Equation : 8*Acetyl-CoA + 7*ATP + 14*NADPH + 6*h + 1*H2O = 1*Hexadecanoate + 8*CoA + 7*ADP + 14*NADP + 7*Orthophosphate Compartment : mesophyll Pathway : Fatty acids biosynthesis Identifier : Hexa_root Equation : 8*Acetyl-CoA + 7*ATP + 14*NADPH + 6*h + 1*H2O = 1*Hexadecanoate + 8*CoA + 7*ADP + 14*NADP + 7*Orthophosphate Compartment : root Pathway : Fatty acids biosynthesis_root Identifier : His Equation : 1*PRPP + 1*L-Glutamine + 1*ATP + 2*NAD + 5*H2O = 1*L-Histidine + 1*AICAR + 1*2-Oxoglutarate + 2*NADH + 7*h + 5*Orthophosphate Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT1G58080.1 / AT1G09795.1 / AT1G31860.1 / AT2G36230.1 / AT4G26900.1 / AT4G14910.1 / AT4G14910.3 / AT3G22425.1 / AT3G22425.2 / AT4G14910.2 / AT1G71920.1 / AT1G71920.3 / AT5G10330.3 / AT5G10330.2 / AT5G10330.1 / AT1G71920.2 / AT4G39120.1 / AT5G63890.1 / AT5G63890.2 Identifier : His_root Equation : 1*PRPP + 1*L-Glutamine + 1*ATP + 2*NAD + 5*H2O = 1*L-Histidine + 1*AICAR + 1*2-Oxoglutarate + 2*NADH + 7*h + 5*Orthophosphate Compartment : root Pathway : Amino acid synthesis Genes : AT1G58080.1 / AT1G09795.1 / AT1G31860.1 / AT2G36230.1 / AT4G26900.1 / AT4G14910.1 / AT4G14910.3 / AT3G22425.1 / AT3G22425.2 / AT4G14910.2 / AT1G71920.1 / AT1G71920.3 / AT5G10330.3 / AT5G10330.2 / AT5G10330.1 / AT1G71920.2 / AT4G39120.1 / AT5G63890.1 / AT5G63890.2 Identifier : HomoSer Equation : 1*L-Aspartate + 1*ATP + 2*NADPH + 2*h = 1*L-Homoserine + 1*ADP + 1*Orthophosphate + 2*NADP Compartment : mesophyll Pathway : Homoserine biosynthesis / Amino acid synthesis Genes : AT5G14060.1 / AT5G14060.2 / AT4G19710.1 / AT5G13280.1 / AT4G19710.2 / AT1G31230.1 / AT1G14810.1 Identifier : HomoSer_root Equation : 1*L-Aspartate + 1*ATP + 2*NADPH + 2*h = 1*L-Homoserine + 1*ADP + 1*Orthophosphate + 2*NADP Compartment : root Pathway : Homoserine biosynthesis / Amino acid synthesis Genes : AT5G14060.1 / AT5G14060.2 / AT4G19710.1 / AT5G13280.1 / AT4G19710.2 / AT1G31230.1 / AT1G14810.1 Identifier : IDH Trivial Name : NADP-dependent isocitrate dehydrogenase, ICDH Equation : 1*Isocitrate + 1*NADP => 1*2-Oxoglutarate + 1*NADPH + 1*CO2 Compartment : mesophyll EC Number : 1.1.1.42 Pathway : Glutamine biosynthesis Genes : AT1G65930.1 / AT5G14590.1 / AT1G54340.1 Identifier : IDH_mitochondria Trivial Name : NAD-dependent isocitrate dehydrogenase Equation : 1*Isocitrate + 1*NAD => 1*2-Oxoglutarate + 1*NADH + 1*CO2 Compartment : Mitochondria_mesophyll EC Number : 1.1.1.41 Pathway : TCA cycle Genes : AT2G17130.1 / AT2G17130.2 / AT5G03290.1 / AT4G35650.1 / AT4G35260.1 / AT3G09810.1 / AT1G32480.1 Identifier : IDH_mitochondria_root Trivial Name : NAD-dependent isocitrate dehydrogenase Equation : 1*Isocitrate + 1*NAD => 1*2-Oxoglutarate + 1*NADH + 1*CO2 Compartment : Mitochondria_root EC Number : 1.1.1.41 Pathway : TCA cycle Genes : AT2G17130.1 / AT2G17130.2 / AT5G03290.1 / AT4G35650.1 / AT4G35260.1 / AT3G09810.1 / AT1G32480.1 Identifier : ILE Equation : 1*L-Threonine + 1*Pyruvate + 1*NADPH + 1*L-Glutamate + 2*h = 1*L-Isoleucine + 1*NH4 + 1*NADP + 1*H2O + 1*CO2 + 1*2-Oxoglutarate Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT1G21540.1 / AT1G21530.2 / AT1G21530.1 / AT1G77240.1 / AT3G10050.1 / AT5G16290.1 / AT2G31810.1 / AT2G31810.2 / AT2G31810.3 / AT5G16290.2 / AT3G48560.1 / AT3G58610.1 / AT3G58610.2 / AT3G58610.3 / AT3G23940.1 / AT3G23940.2 / AT1G50090.1 / AT1G50110.1 / AT1G10070.3 / AT1G10070.2 / AT1G10060.1 / AT3G49680.2 / AT3G05190.1 / AT5G27410.2 / AT5G27410.1 / AT1G10060.3 / AT1G10070.1 / AT3G49680.1 / AT1G10060.2 / AT5G65780.1 Identifier : ILE_root Equation : 1*L-Threonine + 1*Pyruvate + 1*NADPH + 1*L-Glutamate + 2*h = 1*L-Isoleucine + 1*NH4 + 1*NADP + 1*H2O + 1*CO2 + 1*2-Oxoglutarate Compartment : root Pathway : Amino acid synthesis Genes : AT1G21540.1 / AT1G21530.2 / AT1G21530.1 / AT1G77240.1 / AT3G10050.1 / AT5G16290.1 / AT2G31810.1 / AT2G31810.2 / AT2G31810.3 / AT5G16290.2 / AT3G48560.1 / AT3G58610.1 / AT3G58610.2 / AT3G58610.3 / AT3G23940.1 / AT3G23940.2 / AT1G50090.1 / AT1G50110.1 / AT1G10070.3 / AT1G10070.2 / AT1G10060.1 / AT3G49680.2 / AT3G05190.1 / AT5G27410.2 / AT5G27410.1 / AT1G10060.3 / AT1G10070.1 / AT3G49680.1 / AT1G10060.2 / AT5G65780.1 Identifier : IMP Equation : 1*AICAR + 1*5-Formyltetrahydrofolate => 1*Tetrahydrofolate + 1*IMP + 1*H2O + 2*h Compartment : mesophyll Pathway : Inosine-5'-phosphate biosynthesis II Genes : AT2G35040.1 / AT2G35040.2 Identifier : IMP_root Equation : 1*AICAR + 1*5-Formyltetrahydrofolate => 1*Tetrahydrofolate + 1*IMP + 1*H2O + 2*h Compartment : root Pathway : Inosine-5'-phosphate biosynthesis II Genes : AT2G35040.1 / AT2G35040.2 Identifier : Leu Equation : 1*3-Methyl-2-oxobutanoate + 1*L-Glutamate + 1*Acetyl-CoA + 1*H2O + 1*NAD = 1*L-Leucine + 1*2-Oxoglutarate + 1*CoA + 1*NADH + 1*h + 1*CO2 Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT5G23020.1 / AT5G23010.1 / AT1G18500.1 / AT1G74040.1 / AT4G13430.1 / AT2G43090.1 / AT5G14200.1 / AT1G80560.1 / AT1G31180.1 / AT1G80555.1 / AT5G14200.2 / AT5G14200.3 / AT1G50090.1 / AT1G50110.1 / AT1G10070.3 / AT1G10070.2 / AT1G10060.1 / AT3G49680.2 / AT3G05190.1 / AT5G27410.2 / AT5G27410.1 / AT1G10060.3 / AT1G70560.1 / AT3G49680.1 / AT1G10070.1 / AT1G10060.2 / AT5G65780.1 Identifier : Leu_root Equation : 1*3-Methyl-2-oxobutanoate + 1*L-Glutamate + 1*Acetyl-CoA + 1*H2O + 1*NAD = 1*L-Leucine + 1*2-Oxoglutarate + 1*CoA + 1*NADH + 1*h + 1*CO2 Compartment : root Pathway : Amino acid synthesis Genes : AT5G23020.1 / AT5G23010.1 / AT1G18500.1 / AT1G74040.1 / AT4G13430.1 / AT2G43090.1 / AT5G14200.1 / AT1G80560.1 / AT1G31180.1 / AT1G80555.1 / AT5G14200.2 / AT5G14200.3 / AT1G50090.1 / AT1G50110.1 / AT1G10070.3 / AT1G10070.2 / AT1G10060.1 / AT3G49680.2 / AT3G05190.1 / AT5G27410.2 / AT5G27410.1 / AT1G10060.3 / AT1G70560.1 / AT3G49680.1 / AT1G10070.1 / AT1G10060.2 / AT5G65780.1 Identifier : Lino Equation : 1*cis-Octadecenoate + 1*NADH + 1*h + 1*O2 = 1*Linoleate + 1*NAD + 2*H2O Compartment : mesophyll Pathway : Fatty acids biosynthesis Identifier : Lino_root Equation : 1*cis-Octadecenoate + 1*NADH + 1*h + 1*O2 = 1*Linoleate + 1*NAD + 2*H2O Compartment : root Pathway : Fatty acids biosynthesis_root Identifier : Lys Equation : 2*L-Glutamate + 1*Acetyl-CoA + 1*ATP + 2*NADPH + 2*NAD + 2*H2O => 1*L-Lysine + 1*CO2 + 1*2-Oxoglutarate + 1*CoA + 1*AMP + 2*NADP + 2*Orthophosphate + 1*h + 2*NADH Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT2G13810.1 / AT4G33680.1 / AT3G14390.1 / AT5G11880.1 Identifier : Lys_root Equation : 2*L-Glutamate + 1*Acetyl-CoA + 1*ATP + 2*NADPH + 2*NAD + 2*H2O => 1*L-Lysine + 1*CO2 + 1*2-Oxoglutarate + 1*CoA + 1*AMP + 2*NADP + 2*Orthophosphate + 1*h + 2*NADH Compartment : root Pathway : Amino acid synthesis Genes : AT2G13810.1 / AT4G33680.1 / AT3G14390.1 / AT5G11880.1 Identifier : MDH Trivial Name : malate dehydrogenase Equation : 1*L-Malate + 1*NAD = 1*Oxaloacetate + 1*NADH + 1*h Compartment : mesophyll EC Number : 1.1.1.37 Pathway : Aspartate degradation Genes : AT5G43330.1 / AT1G04410.1 / AT5G56720.1 / AT3G15020.1 / AT3G15020.2 / AT5G09660.1 / AT5G09660.2 / AT5G09660.3 / AT5G09660.4 / AT1G53240.1 / AT2G22780.1 / AT3G47520.1 Identifier : MDH_mitochondria Trivial Name : malate dehydrogenase Equation : 1*L-Malate + 1*NAD = 1*Oxaloacetate + 1*NADH + 1*h Compartment : Mitochondria_mesophyll EC Number : 1.1.1.37 Pathway : TCA cycle Genes : AT5G43330.1 / AT1G04410.1 / AT5G56720.1 / AT3G15020.1 / AT3G15020.2 / AT5G09660.1 / AT5G09660.2 / AT5G09660.3 / AT5G09660.4 / AT1G53240.1 / AT2G22780.1 / AT3G47520.1 Identifier : MDH_mitochondria_root Trivial Name : malate dehydrogenase Equation : 1*L-Malate + 1*NAD = 1*Oxaloacetate + 1*NADH + 1*h Compartment : Mitochondria_root EC Number : 1.1.1.37 Pathway : TCA cycle Genes : AT5G43330.1 / AT1G04410.1 / AT5G56720.1 / AT3G15020.1 / AT3G15020.2 / AT5G09660.1 / AT5G09660.2 / AT5G09660.3 / AT5G09660.4 / AT1G53240.1 / AT2G22780.1 / AT3G47520.1 Identifier : MDH_root Trivial Name : malate dehydrogenase Equation : 1*L-Malate + 1*NAD = 1*Oxaloacetate + 1*NADH + 1*h Compartment : root EC Number : 1.1.1.37 Pathway : Aspartate degradation Genes : AT5G43330.1 / AT1G04410.1 / AT5G56720.1 / AT3G15020.1 / AT3G15020.2 / AT5G09660.1 / AT5G09660.2 / AT5G09660.3 / AT5G09660.4 / AT1G53240.1 / AT2G22780.1 / AT3G47520.1 Identifier : MET Trivial Name : L-Methionine synthesis pathway Equation : 1*L-Homoserine + 1*ATP + 1*L-Cysteine + 1*5-Methyltetrahydrofolate + 1*H2O => 1*L-Methionine + 1*ADP + 1*Orthophosphate + 1*Pyruvate + 1*NH4 + 1*Tetrahydrofolate + 1*h Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT2G17265.1 / AT3G01120.1 / AT3G57050.1 / AT4G23590.1 / AT4G23600.1 / AT4G23600.2 / AT4G23600.3 / AT5G17920.2 / AT3G03780.2 / AT3G03780.3 / AT3G03780.1 / AT5G20980.2 / AT3G63250.1 / AT3G25900.1 / AT3G22740.1 / AT3G25900.3 / AT3G25900.2 / AT3G63250.2 Identifier : MET_root Equation : 1*L-Homoserine + 1*ATP + 1*L-Cysteine + 1*5-Methyltetrahydrofolate + 1*H2O => 1*L-Methionine + 1*ADP + 1*Orthophosphate + 1*Pyruvate + 1*NH4 + 1*Tetrahydrofolate + 1*h Compartment : root Pathway : Amino acid synthesis Genes : AT2G17265.1 / AT3G01120.1 / AT3G57050.1 / AT4G23590.1 / AT4G23600.1 / AT4G23600.2 / AT4G23600.3 / AT5G17920.2 / AT3G03780.2 / AT3G03780.3 / AT3G03780.1 / AT5G20980.2 / AT3G63250.1 / AT3G25900.1 / AT3G22740.1 / AT3G25900.3 / AT3G25900.2 / AT3G63250.2 Identifier : MH Trivial Name : maltose hydrolase Equation : alpha-Maltose + H2O => 2*D-Glucose Compartment : mesophyll EC Number : 3.2.1.20 Pathway : Starch degradation Genes : AT1G68560.1 / AT3G45940.1 / AT3G23640.1 / AT3G23640.2 / AT5G63840.1 / AT5G11720.1 Identifier : MS3 Equation : 5-Methyltetrahydrofolate + 3*NAD + 2*H2O => Tetrahydrofolate + 3*NADH + 3*h + CO2 Compartment : mesophyll Identifier : MS3_root Equation : 5-Methyltetrahydrofolate + 3*NAD + 2*H2O => Tetrahydrofolate + 3*NADH + 3*h + CO2 Compartment : root Identifier : MTHFR Trivial Name : 5,10-methylenetetrahydrofolate reductase Equation : 5,10-Methylenetetrahydrofolate + NADH + h => 5-Methyltetrahydrofolate + NAD Compartment : mesophyll EC Number : 1.5.1.20 Pathway : Folate transformations II Genes : AT3G59970.1 / AT3G59970.2 / AT3G59970.3 / AT2G44160.1 Identifier : MTHFR_root Trivial Name : 5,10-methylenetetrahydrofolate reductase Equation : 5,10-Methylenetetrahydrofolate + NADH + h => 5-Methyltetrahydrofolate + NAD Compartment : root EC Number : 1.5.1.20 Pathway : Folate transformations II Genes : AT3G59970.1 / AT3G59970.2 / AT3G59970.3 / AT2G44160.1 Identifier : NADP_MDH Trivial Name : NADP-linked malate dehydrogenase / NADP-MDH Equation : 1*Oxaloacetate + 1*NADPH + 1*h = 1*L-Malate + 1*NADP Compartment : plastid EC Number : 1.1.1.82 Pathway : Malate-Oxaloacetate shuttle Genes : AT5G58330.1 / AT5G58330.2 / AT5G58330.3 Identifier : NIA Trivial Name : nitrate reductase Equation : Nitrate + NADH + h => Nitrite + NAD + H2O Compartment : mesophyll EC Number : 1.7.1.1 Pathway : Nitrate reduction Genes : AT1G77760.1 / AT1G37130.1 Identifier : NIA_root Trivial Name : nitrate reductase Equation : Nitrate + NADH + h => Nitrite + NAD + H2O Compartment : root EC Number : 1.7.1.1 Pathway : Nitrate reduction Genes : AT1G77760.1 / AT1G37130.1 Identifier : NiR Trivial Name : nitrite reductase Equation : Nitrite + 8*h + 6*Fd_red => NH4 + 2*H2O + 6*Fd_ox Compartment : plastid EC Number : 1.7.7.1 Pathway : Nitrate reduction Genes : AT2G15620.1 Identifier : NiR_root Trivial Name : nitrite reductase Equation : Nitrite + 8*h + 3*NADPH => NH4 + 2*H2O + 3*NADP + 3*h Compartment : root EC Number : 1.7.7.1 Pathway : Nitrate reduction Genes : AT2G15620.1 Identifier : Octa Equation : 1*Hexadecanoate + 2*NADPH + 1*h + 1*Acetyl-CoA + 1*ATP = 1*Octadecanoate + 1*ADP + 1*Orthophosphate + 2*NADP + 1*CoA Compartment : mesophyll Pathway : Fatty acids biosynthesis Identifier : Octa_root Equation : 1*Hexadecanoate + 2*NADPH + 1*h + 1*Acetyl-CoA + 1*ATP = 1*Octadecanoate + 1*ADP + 1*Orthophosphate + 2*NADP + 1*CoA Compartment : root Pathway : Fatty acids biosynthesis_root Identifier : Orni Equation : 2*L-Glutamate + 1*Acetyl-CoA + 1*ATP + 1*NADPH + 1*H2O => 1*L-Ornithine + 1*2-Oxoglutarate + 1*CoA + 1*ADP + 1*Orthophosphate + 1*NADP + 1*Acetate Compartment : mesophyll Pathway : Ornithine biosynthesis Genes : AT2G37500.1 / AT4G37670.1 / AT2G37500.2 / AT2G22910.1 / AT4G37670.2 / AT3G57560.1 / AT2G19940.1 / AT2G19940.2 / AT1G80600.1 / AT4G17830.2 / AT4G17830.1 Identifier : Orni_root Equation : 2*L-Glutamate + 1*Acetyl-CoA + 1*ATP + 1*NADPH + 1*H2O => 1*L-Ornithine + 1*2-Oxoglutarate + 1*CoA + 1*ADP + 1*Orthophosphate + 1*NADP + 1*Acetate Compartment : root Pathway : Ornithine biosynthesis Genes : AT2G37500.1 / AT4G37670.1 / AT2G37500.2 / AT2G22910.1 / AT4G37670.2 / AT3G57560.1 / AT2G19940.1 / AT2G19940.2 / AT1G80600.1 / AT4G17830.2 / AT4G17830.1 Identifier : OxPhos1_phloem Equation : 5*h + NADH + CoQ => 4*H_in + NAD + CoQH2 Compartment : phloem Identifier : OxPhos2_phloem Equation : Succinate + CoQ => Fumarate + CoQH2 Compartment : phloem Identifier : OxPhos3_phloem Equation : 2*h + CoQH2 + 2*Cyt_ox => 4*H_in + CoQ + 2*Cyt_red Compartment : phloem Identifier : OxPhos4_phloem Equation : 8*h + 4*Cyt_red + O2 => 4*H_in + 4*Cyt_ox + 2*H2O Compartment : phloem Identifier : OxPhos5_phloem Equation : 3*H_in + ADP + Orthophosphate => 2*h + ATP + H2O Compartment : phloem Identifier : PDC_TCA Equation : Pyruvate + 2*H2O + ADP + Orthophosphate + 4*NAD + Fumarate => 3*CO2 + 2*h + ATP + 4*NADH + Succinate Compartment : phloem Identifier : PDH Trivial Name : pyruvate dehydrogenase (acetyl-transferring) Equation : Pyruvate + CoA + NAD => CO2 + NADH + Acetyl-CoA Compartment : Mitochondria_mesophyll EC Number : 1.2.1.- Pathway : Pyruvate decarboxylation to acetyl CoA Genes : AT1G59900.1 / AT1G30120.1 / AT1G24180.1 / AT1G01090.1 / AT5G50850.1 / AT2G34590.1 / AT3G13930.1 / AT1G34430.1 / AT1G54220.1 / AT3G52200.2 / AT3G52200.1 / AT1G54220.2 / AT3G25860.1 / AT3G17240.1 / AT3G17240.2 / AT3G16950.2 / AT3G16950.1 / AT1G48030.1 / AT1G48030.2 / AT3G17240.3 / AT4G16155.1 Identifier : PDH_root Trivial Name : pyruvate dehydrogenase (acetyl-transferring) Equation : Pyruvate + CoA + NAD => CO2 + NADH + Acetyl-CoA Compartment : Mitochondria_root EC Number : 1.2.1.- Pathway : Pyruvate decarboxylation to acetyl CoA Genes : AT1G59900.1 / AT1G30120.1 / AT1G24180.1 / AT1G01090.1 / AT5G50850.1 / AT2G34590.1 / AT3G13930.1 / AT1G34430.1 / AT1G54220.1 / AT3G52200.2 / AT3G52200.1 / AT1G54220.2 / AT3G25860.1 / AT3G17240.1 / AT3G17240.2 / AT3G16950.2 / AT3G16950.1 / AT1G48030.1 / AT1G48030.2 / AT3G17240.3 / AT4G16155.1 Identifier : PFK Trivial Name : 6-phosphofructokinase Equation : D-Fructose_6-phosphate + ATP => ADP + D-Fructose_1,6-bisphosphate + h Compartment : mesophyll EC Number : 2.7.1.11 Pathway : Glycolysis Genes : AT5G47810.1 / AT2G22480.1 / AT5G61580.1 / AT5G61580.2 / AT5G56630.1 / AT5G61580.1 / AT4G29220.1 / AT4G32840.1 / AT4G26270.1 Identifier : PFK_root Trivial Name : 6-phosphofructokinase Equation : D-Fructose_6-phosphate + ATP => ADP + D-Fructose_1,6-bisphosphate + h Compartment : root EC Number : 2.7.1.11 Pathway : Glycolysis Genes : AT5G47810.1 / AT2G22480.1 / AT5G61580.1 / AT5G61580.2 / AT5G56630.1 / AT5G61580.1 / AT4G29220.1 / AT4G32840.1 / AT4G26270.1 Identifier : PGDH Trivial Name : phosphogluconate dehydrogenase Equation : 6-phospho-D-Gluconate + NADP => D-Ribulose_5-phosphate + CO2 + NADPH Compartment : mesophyll EC Number : 1.1.1.44 Pathway : Pentose phosphate pathway Genes : AT5G41670.1 / AT3G02360.2 / AT1G64190.1 / AT3G02360.1 / AT5G41670.2 Identifier : PGDH_plastid Trivial Name : phosphogluconate dehydrogenase Equation : 6-phospho-D-Gluconate + NADP => D-Ribulose_5-phosphate + CO2 + NADPH Compartment : plastid EC Number : 1.1.1.44 Pathway : Pentose phosphate pathway Genes : AT5G41670.1 / AT3G02360.2 / AT1G64190.1 / AT3G02360.1 / AT5G41670.2 Identifier : PGDH_root Trivial Name : phosphogluconate dehydrogenase Equation : 6-phospho-D-Gluconate + NADP => D-Ribulose_5-phosphate + CO2 + NADPH Compartment : root EC Number : 1.1.1.44 Pathway : Pentose phosphate pathway Genes : AT5G41670.1 / AT3G02360.2 / AT1G64190.1 / AT3G02360.1 / AT5G41670.2 Identifier : PGI Trivial Name : phosphoglucose isomerase Equation : D-Glucose_6-phosphate = D-Fructose_6-phosphate Compartment : mesophyll EC Number : 5.3.1.9 Pathway : Glycolysis Genes : AT5G42740.1 / AT4G24620.2 / AT4G24620.1 Identifier : PGI_plastid Trivial Name : Glucose_6-phosphate isomerase Equation : D-Fructose_6-phosphate = D-Glucose_6-phosphate Compartment : plastid EC Number : 5.3.1.9 Pathway : Starch biosynthesis Genes : AT5G42740.1 / AT4G24620.2 / AT4G24620.1 Identifier : PGI_root Trivial Name : phosphoglucose isomerase Equation : D-Glucose_6-phosphate = D-Fructose_6-phosphate Compartment : root EC Number : 5.3.1.9 Pathway : Glycolysis Genes : AT5G42740.1 / AT4G24620.2 / AT4G24620.1 Identifier : PGK Trivial Name : phosphoglycerateF kinase Equation : 1,3-bisphospho-D-Glycerate + ADP = D-Glycerate_3-phosphate + ATP Compartment : mesophyll EC Number : 2.7.2.3 Pathway : Glycolysis Genes : AT3G12780.1 / AT1G56190.1 / AT1G79550.2 / AT1G79550.1 / AT1G56190.2 Identifier : PGK_plastid Trivial Name : phosphoglycerate kinase Equation : D-Glycerate_3-phosphate + ATP = 1,3-bisphospho-D-Glycerate + ADP Compartment : plastid EC Number : 2.7.2.3 Pathway : Calvin-Benson-Bassham cycle Genes : AT3G12780.1 / AT1G56190.1 / AT1G79550.2 / AT1G79550.1 / AT1G56190.2 Identifier : PGK_root Trivial Name : phosphoglycerateF kinase Equation : 1,3-bisphospho-D-Glycerate + ADP = D-Glycerate_3-phosphate + ATP Compartment : root EC Number : 2.7.2.3 Pathway : Glycolysis Genes : AT3G12780.1 / AT1G56190.1 / AT1G79550.2 / AT1G79550.1 / AT1G56190.2 Identifier : PGL Trivial Name : 6-phosphogluconolactonase Equation : D-Glucono-1,5-lactone_6-phosphate + H2O => 6-phospho-D-Gluconate + h Compartment : mesophyll EC Number : 3.1.1.31 Pathway : Pentose phosphate pathway Genes : AT5G24410.1 / AT5G24400.1 / AT5G24420.1 / AT3G49360.1 / AT1G13700.1 Identifier : PGL_plastid Trivial Name : 6-phosphogluconolactonase Equation : D-Glucono-1,5-lactone_6-phosphate + H2O => 6-phospho-D-Gluconate + h Compartment : plastid EC Number : 3.1.1.31 Pathway : Pentose phosphate pathway Genes : AT5G24410.1 / AT5G24400.1 / AT5G24420.1 / AT3G49360.1 / AT1G13700.1 Identifier : PGL_root Trivial Name : 6-phosphogluconolactonase Equation : D-Glucono-1,5-lactone_6-phosphate + H2O => 6-phospho-D-Gluconate + h Compartment : root EC Number : 3.1.1.31 Pathway : Pentose phosphate pathway Genes : AT5G24410.1 / AT5G24400.1 / AT5G24420.1 / AT3G49360.1 / AT1G13700.1 Identifier : PGM Trivial Name : phosphoglycerate mutase Equation : D-Glycerate_3-phosphate = D-Glycerate_2-phosphate Compartment : mesophyll EC Number : 5.4.2.11 Pathway : Glycolysis Genes : AT1G09780.1 / AT3G08590.1 / AT1G22170.1 / AT1G78050.1 / AT3G50520.1 / AT3G08590.2 / AT3G30841.1 / AT5G04120.1 / AT4G09520.1 Identifier : PGM3 Trivial Name : phosphoglucomutase Equation : D-Glucose_1-phosphate = D-Glucose_6-phosphate Compartment : mesophyll EC Number : 5.4.2.2 Pathway : Sucrose biosynthesis Genes : AT1G23190.1 / AT1G70820.1 / AT1G70730.3 / AT5G17530.3 / AT1G70730.2 / AT1G70730.1 / AT5G17530.2 / AT5G17530.1 / AT5G51820.1 Identifier : PGM3_plastid Trivial Name : phosphoglucomutase Equation : D-Glucose_6-phosphate = D-Glucose_1-phosphate Compartment : plastid EC Number : 5.4.2.11 Pathway : Starch biosynthesis Genes : AT1G23190.1 / AT1G70820.1 / AT1G70730.3 / AT5G17530.3 / AT1G70730.2 / AT1G70730.1 / AT5G17530.2 / AT5G17530.1 / AT5G51820.1 Identifier : PGM3_root Trivial Name : phosphoglucomutase Equation : D-Glucose_1-phosphate = D-Glucose_6-phosphate Compartment : root EC Number : 5.4.2.2 Pathway : Sucrose biosynthesis Genes : AT1G23190.1 / AT1G70820.1 / AT1G70730.3 / AT5G17530.3 / AT1G70730.2 / AT1G70730.1 / AT5G17530.2 / AT5G17530.1 / AT5G51820.1 Identifier : PGM_root Trivial Name : phosphoglycerate mutase Equation : D-Glycerate_3-phosphate = D-Glycerate_2-phosphate Compartment : root EC Number : 5.4.2.11 Pathway : Glycolysis Genes : AT1G09780.1 / AT3G08590.1 / AT1G22170.1 / AT1G78050.1 / AT3G50520.1 / AT3G08590.2 / AT3G30841.1 / AT5G04120.1 / AT4G09520.1 Identifier : PGP Trivial Name : phosphoglycolate phosphotase Equation : Phosphoglycolate + H2O => Glycolate + Orthophosphate Compartment : plastid EC Number : 3.1.3.18 Pathway : Photorespiration Genes : AT5G36790.1 / AT5G47760.1 / AT5G36700.3 / AT5G36700.2 / AT5G36700.4 / AT5G36790.3 / AT5G36790.2 / AT5G36700.1 Identifier : PK Trivial Name : Pyruvate kinase Equation : Phosphoenolpyruvate + ADP + h = Pyruvate + ATP Compartment : mesophyll EC Number : 2.7.1.40 Pathway : Glycolysis Genes : AT5G52920.1 / AT1G32440.1 / AT3G55650.1 / AT5G56350.1 / AT5G63680.1 / AT3G25960.1 / AT4G26390.1 / AT3G55810.1 / AT2G36580.1 / AT3G04050.1 / AT3G49160.1 / AT5G08570.1 / AT3G52990.1 / AT3G52990.2 / AT3G22960.1 Identifier : PK_root Trivial Name : Pyruvate kinase Equation : Phosphoenolpyruvate + ADP + h = Pyruvate + ATP Compartment : root EC Number : 2.7.1.40 Pathway : Glycolysis Genes : AT5G52920.1 / AT1G32440.1 / AT3G55650.1 / AT5G56350.1 / AT5G63680.1 / AT3G25960.1 / AT4G26390.1 / AT3G55810.1 / AT2G36580.1 / AT3G04050.1 / AT3G49160.1 / AT5G08570.1 / AT3G52990.1 / AT3G52990.2 / AT3G22960.1 Identifier : PMet Equation : 2*Pyruvate + 1*NADPH + 2*h => 1*3-Methyl-2-oxobutanoate + 1*CO2 + 1*NADP + 1*H2O Compartment : mesophyll Pathway : Valine biosynthesis Genes : AT5G16290.1 / AT2G31810.1 / AT5G16290.2 / AT2G31810.3 / AT2G31810.2 / AT3G48560.1 / AT3G58610.3 / AT3G58610.2 / AT3G58610.1 / AT3G23940.1 / AT3G23940.2 Identifier : PMet_root Equation : 2*Pyruvate + 1*NADPH + 2*h => 1*3-Methyl-2-oxobutanoate + 1*CO2 + 1*NADP + 1*H2O Compartment : root Pathway : Valine biosynthesis Genes : AT5G16290.1 / AT2G31810.1 / AT5G16290.2 / AT2G31810.3 / AT2G31810.2 / AT3G48560.1 / AT3G58610.3 / AT3G58610.2 / AT3G58610.1 / AT3G23940.1 / AT3G23940.2 Identifier : PPC Trivial Name : phosphoenolpyruvate carboxylase Equation : 1*Phosphoenolpyruvate + 1*CO2 + 1*H2O => 1*Oxaloacetate + 1*Orthophosphate + 1*h Compartment : mesophyll EC Number : 4.1.1.31 Kegg ID : R00206 / R00345 Pathway : Glutamine biosynthesis Genes : AT1G68750.1 / AT1G53310.3 / AT1G53310.2 / AT2G42600.1 / AT3G14940.1 / AT1G53310.1 / AT2G42600.2 Identifier : PPC_root Trivial Name : phosphoenolpyruvate carboxylase Equation : 1*Phosphoenolpyruvate + 1*CO2 + 1*H2O => 1*Oxaloacetate + 1*Orthophosphate + 1*h Compartment : root EC Number : 4.1.1.31 Kegg ID : R00206 / R00345 Pathway : Glutamine biosynthesis Genes : AT1G68750.1 / AT1G53310.3 / AT1G53310.2 / AT2G42600.1 / AT3G14940.1 / AT1G53310.1 / AT2G42600.2 Identifier : PRK_plastid Trivial Name : phosphoribulokinase Equation : D-Ribulose_5-phosphate + ATP => D-Ribulose_1,5-bisphosphate + ADP + h Compartment : plastid EC Number : 2.7.1.19 Pathway : Calvin-Benson-Bassham cycle Genes : AT2G47400.1 / AT1G12900.4 / AT1G12900.3 / AT1G12900.1 Identifier : PRO Equation : 1*L-Glutamate + 1*ATP + 2*NADPH + h = 1*L-Proline + 1*ADP + 1*Orthophosphate + 1*H2O + 2*NADP Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT2G39800.1 / AT3G55610.1 / AT2G39800.4 / AT2G39800.3 / AT3G55610.2 / AT2G39800.2 / AT5G14800.2 / AT5G14800.1 Identifier : PRO_root Equation : 1*L-Glutamate + 1*ATP + 2*NADPH + h = 1*L-Proline + 1*ADP + 1*Orthophosphate + 1*H2O + 2*NADP Compartment : root Pathway : Amino acid synthesis Identifier : Phe Equation : 1*Chorismate + 1*L-Glutamate + 1*h => 1*L-Phenylalanine + 1*2-Oxoglutarate + 1*CO2 + 1*H2O Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT2G47485.1 / AT3G62650.1 / AT3G62650.2 / AT3G29200.1 / AT5G10870.1 / AT1G69370.1 / AT2G22250.2 / AT1G11790.2 / AT1G08250.1 / AT3G44720.1 / AT2G27820.1 / AT3G07630.1 / AT1G11790.1 / AT5G22630.1 Identifier : Phe_root Equation : 1*Chorismate + 1*L-Glutamate + 1*h => 1*L-Phenylalanine + 1*2-Oxoglutarate + 1*CO2 + 1*H2O Compartment : root Pathway : Amino acid synthesis Genes : AT2G47485.1 / AT3G62650.1 / AT3G62650.2 / AT3G29200.1 / AT5G10870.1 / AT1G69370.1 / AT2G22250.2 / AT1G11790.2 / AT1G08250.1 / AT3G44720.1 / AT2G27820.1 / AT3G07630.1 / AT1G11790.1 / AT5G22630.1 Identifier : R5PI Trivial Name : ribose-5-phosphate isomerase Equation : D-Ribulose_5-phosphate = D-Ribose_5-phosphate Compartment : mesophyll EC Number : 5.3.1.6 Pathway : Pentose phosphate pathway Genes : AT3G04790.1 / AT1G71100.1 / AT2G01290.1 Identifier : R5PI_plastid Trivial Name : ribose-5-phosphate isomerase Equation : D-Ribose_5-phosphate = D-Ribulose_5-phosphate Compartment : plastid EC Number : 5.3.1.6 Pathway : Calvin-Benson-Bassham cycle Genes : AT3G04790.1 / AT1G71100.1 / AT2G01290.1 Identifier : R5PI_root Trivial Name : ribose-5-phosphate isomerase Equation : D-Ribulose_5-phosphate = D-Ribose_5-phosphate Compartment : root EC Number : 5.3.1.6 Pathway : Pentose phosphate pathway Genes : AT3G04790.1 / AT1G71100.1 / AT2G01290.1 Identifier : RDPK Trivial Name : ribose-phosphate diphosphokinase Equation : 1*D-Ribose_5-phosphate + 1*ATP = 1*PRPP + 1*AMP + 1*h Compartment : mesophyll EC Number : 2.7.6.1 Pathway : PRPP biosynthesis I Genes : AT2G44530.1 / AT2G35390.1 / AT2G35390.3 / AT2G44530.2 / AT1G10700.1 / AT2G35390.2 / AT2G42910.1 / AT1G32380.1 Identifier : RDPK_root Trivial Name : ribose-phosphate diphosphokinase Equation : 1*D-Ribose_5-phosphate + 1*ATP = 1*PRPP + 1*AMP + 1*h Compartment : root EC Number : 2.7.6.1 Pathway : PRPP biosynthesis I_root Genes : AT2G44530.1 / AT2G35390.1 / AT2G35390.3 / AT2G44530.2 / AT1G10700.1 / AT2G35390.2 / AT2G42910.1 / AT1G32380.1 Identifier : RPC2_plastide Trivial Name : ribulose-bisphosphate carboxylase, RuBisCO Equation : D-Ribulose_1,5-bisphosphate + O2 => D-Glycerate_3-phosphate + Phosphoglycolate + 2*h Compartment : plastid EC Number : 4.1.1.39 Pathway : Photorespiration Genes : AT5G38410.3 / AT5G38420.1 / AT1G67090.1 / AT5G38410.2 / AT5G38410.1 / AT1G67090.2 / ATMG00280.1 / ATCG00490.1 Identifier : RPC_plastide Trivial Name : ribulose-bisphosphate carboxylase, RuBisCo Equation : D-Ribulose_1,5-bisphosphate + CO2 + H2O => 2*D-Glycerate_3-phosphate + 2*h Compartment : plastid EC Number : 4.1.1.39 Pathway : Calvin-Benson-Bassham cycle Genes : AT5G38410.3 / AT5G38420.1 / AT5G38430.1 / AT5G38410.2 / AT1G67090.1 / AT1G67090.2 / AT5G38410.1 / ATMG00280.1 / AT2G07732.1 / ATCG00490.1 Identifier : RPE Trivial Name : ribulose phosphate 3-epimerase Equation : D-Ribulose_5-phosphate = D-Xylulose_5-phosphate Compartment : mesophyll EC Number : 5.1.3.1 Pathway : Pentose phosphate pathway Genes : AT1G63290.1 / AT3G01850.1 / AT5G61410.1 / AT3G01850.2 / AT5G61410.2 Identifier : RPE_plastid Trivial Name : ribulose-phosphate 3-epimerase Equation : D-Xylulose_5-phosphate = D-Ribulose_5-phosphate Compartment : plastid EC Number : 5.1.3.1 Pathway : Calvin-Benson-Bassham cycle Genes : AT1G63290.1 / AT3G01850.1 / AT5G61410.1 / AT3G01850.2 / AT5G61410.2 Identifier : RPE_root Trivial Name : ribulose phosphate 3-epimerase Equation : D-Ribulose_5-phosphate = D-Xylulose_5-phosphate Compartment : root EC Number : 5.1.3.1 Pathway : Pentose phosphate pathway Genes : AT1G63290.1 / AT3G01850.1 / AT5G61410.1 / AT3G01850.2 / AT5G61410.2 Identifier : SBP_plastid Trivial Name : sedoheptulose-1,7-bisphosphatase Equation : Sedoheptulose_1,7-bisphosphate + H2O => D-Sedoheptulose_7-phosphate + Orthophosphate Compartment : plastid EC Number : 3.1.3.37 Pathway : Calvin-Benson-Bassham cycle Genes : AT3G55800.1 Identifier : SCL Trivial Name : succinate-CoA ligase Equation : 1*Succinyl-CoA + 1*ADP + 1*Orthophosphate = 1*Succinate + 1*ATP + 1*CoA Compartment : Mitochondria_mesophyll EC Number : 6.2.1.5 Pathway : TCA cycle Genes : AT5G23250.1 / AT2G20420.1 / AT5G08300.1 / AT5G23250.2 Identifier : SCL_root Trivial Name : succinate-CoA ligase Equation : 1*Succinyl-CoA + 1*ADP + 1*Orthophosphate = 1*Succinate + 1*ATP + 1*CoA Compartment : Mitochondria_root EC Number : 6.2.1.5 Pathway : TCA cycle Genes : AT5G23250.1 / AT2G20420.1 / AT5G08300.1 / AT5G23250.2 Identifier : SER Equation : 1*D-Glycerate_3-phosphate + 1*L-Glutamate + 1*NAD + 1*H2O => 1*L-Serine + 1*2-Oxoglutarate + 1*Orthophosphate + 1*h + 1*NADH Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT3G19480.1 / AT4G34200.1 / AT1G17745.1 / AT1G17745.2 / AT2G17630.1 / AT3G47810.2 / AT3G47810.1 / AT3G47810.2 / AT3G47810.3 / AT1G18640.2 Identifier : SER_root Equation : 1*D-Glycerate_3-phosphate + 1*L-Glutamate + 1*NAD + 1*H2O => 1*L-Serine + 1*2-Oxoglutarate + 1*Orthophosphate + 1*h + 1*NADH Compartment : root Pathway : Amino acid synthesis Genes : AT3G19480.1 / AT4G34200.1 / AT1G17745.1 / AT1G17745.2 / AT2G17630.1 / AT3G47810.2 / AT3G47810.1 / AT3G47810.2 / AT3G47810.3 / AT1G18640.2 Identifier : SK Trivial Name : starch kinase Equation : Starch + 6*ATP + 6*H2O => 6*6-Phosphogluco-amylopectin + 6*AMP + 6*Orthophosphate Compartment : plastid EC Number : 2.7.9.4 Pathway : Starch degradation Genes : AT4G24450.1 / AT1G10760.1 Identifier : SPP Trivial Name : sucrose-phosphatase Equation : Sucrose_6-phosphate + H2O = Sucrose + Orthophosphate Compartment : mesophyll EC Number : 3.1.3.24 Pathway : Sucrose biosynthesis Genes : AT1G51420.1 / AT3G54270.1 / AT3G52340.1 / AT2G35840.1 / AT3G52340.3 / AT3G52340.2 / AT2G35840.2 / AT2G35840.3 Identifier : SPS Trivial Name : sucrose-phosphate synthase Equation : UDP-Glucose + D-Fructose_6-phosphate => Sucrose_6-phosphate + UDP + h Compartment : mesophyll EC Number : 2.4.1.14 Pathway : Sucrose biosynthesis Genes : AT5G11110.1 / AT1G04920.1 / AT4G10120.1 / AT4G10120.2 / AT5G20280.1 Identifier : SUL_root Equation : 1*Sulfate + 2*ATP + 4*NADPH + 3*h => 1*H2S + 4*NADP + 1*AMP + 1*ADP + 3*Orthophosphate + 1*H2O Compartment : root Pathway : Sulfate reduction II Genes : AT1G18070.3 / AT1G18070.2 / AT1G18070.1 / AT5G10630.1 / AT5G10630.2 / AT1G19920.1 / AT3G22890.1 / AT4G14680.1 / AT5G43780.1 / AT1G62180.2 / AT4G21990.2 / AT4G04610.1 / AT4G21990.1 / AT1G62180.1 / AT5G04590.1 Identifier : Suc-CoA Trivial Name : 2-oxoglutarate dehydrogenase Equation : 1*2-Oxoglutarate + 1*CoA + 1*NAD => 1*Succinyl-CoA + 1*NADH + 1*CO2 Compartment : Mitochondria_mesophyll Pathway : TCA cycle Genes : AT3G17390.1 / AT1G02500.1 / AT2G36880.1 / AT4G01850.1 / AT5G65750.1 / AT3G55410.1 / AT2G36880.2 / AT4G01850.2 / AT1G02500.2 / AT4G26910.1 / AT4G26910.2 / AT4G26910.3 / AT5G55070.1 / AT3G17240.1 / AT3G17240.2 / AT3G17240.3 / AT3G16950.2 / AT3G16950.1 / AT1G48030.1 / AT1G48030.2 / AT4G16155.1 Identifier : Suc-CoA_root Trivial Name : 2-oxoglutarate dehydrogenase Equation : 1*2-Oxoglutarate + 1*CoA + 1*NAD => 1*Succinyl-CoA + 1*NADH + 1*CO2 Compartment : Mitochondria_root Pathway : TCA cycle Genes : AT3G17390.1 / AT1G02500.1 / AT2G36880.1 / AT4G01850.1 / AT5G65750.1 / AT3G55410.1 / AT2G36880.2 / AT4G01850.2 / AT1G02500.2 / AT4G26910.1 / AT4G26910.2 / AT4G26910.3 / AT5G55070.1 / AT3G17240.1 / AT3G17240.2 / AT3G17240.3 / AT3G16950.2 / AT3G16950.1 / AT1G48030.1 / AT1G48030.2 / AT4G16155.1 Identifier : Sulfite_reductase Trivial Name : Sulfite reductase Equation : Sulfite + 3*Fd_red + 8*h => 3*Fd_ox + H2S + 3*H2O Compartment : plastid EC Number : 1.8.7.1 Pathway : Sulfate reduction II Genes : AT5G04590.1 Identifier : TA Trivial Name : transaldolase Equation : D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate = D-Fructose_6-phosphate + D-Erythrose_4-phosphate Compartment : mesophyll EC Number : 2.2.1.2 Pathway : Pentose phosphate pathway Genes : AT2G45290.1 / AT5G13420.1 / AT1G12230.2 / AT1G12230.1 Identifier : TA_plastid Trivial Name : transaldolase Equation : D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate = D-Fructose_6-phosphate + D-Erythrose_4-phosphate Compartment : plastid EC Number : 2.2.1.2 Pathway : Pentose phosphate pathway Genes : AT2G45290.1 / AT5G13420.1 / AT1G12230.2 / AT1G12230.1 Identifier : TA_root Trivial Name : transaldolase Equation : D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate = D-Fructose_6-phosphate + D-Erythrose_4-phosphate Compartment : root EC Number : 2.2.1.2 Pathway : Pentose phosphate pathway Genes : AT2G45290.1 / AT5G13420.1 / AT1G12230.2 / AT1G12230.1 Identifier : TKa Trivial Name : transketolase Equation : D-Ribose_5-phosphate + D-Xylulose_5-phosphate = D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate Compartment : mesophyll EC Number : 2.2.1.1 Pathway : Pentose phosphate pathway Genes : AT2G45290.1 / AT3G60750.1 / AT3G60750.2 Identifier : TKa_plastid Trivial Name : transketolase Equation : D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate = D-Ribose_5-phosphate + D-Xylulose_5-phosphate Compartment : plastid EC Number : 2.2.1.1 Pathway : Calvin-Benson-Bassham cycle Genes : AT2G45290.1 / AT3G60750.1 / AT3G60750.2 Identifier : TKa_root Trivial Name : transketolase Equation : D-Ribose_5-phosphate + D-Xylulose_5-phosphate = D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate Compartment : root EC Number : 2.2.1.1 Pathway : Pentose phosphate pathway Genes : AT2G45290.1 / AT3G60750.1 / AT3G60750.2 Identifier : TKb Trivial Name : transketolase Equation : D-Erythrose_4-phosphate + D-Xylulose_5-phosphate = D-Fructose_6-phosphate + D-Glyceraldehyde_3-phosphate Compartment : mesophyll EC Number : 2.2.1.1 Pathway : Pentose phosphate pathway Genes : AT3G60750.1 / AT3G60750.2 / AT2G45290.1 Identifier : TKb_plastid Trivial Name : transketolase Equation : D-Fructose_6-phosphate + D-Glyceraldehyde_3-phosphate = D-Erythrose_4-phosphate + D-Xylulose_5-phosphate Compartment : plastid EC Number : 2.2.1.1 Pathway : Calvin-Benson-Bassham cycle Genes : AT3G60750.1 / AT3G60750.2 / AT2G45290.1 Identifier : TKb_root Trivial Name : transketolase Equation : D-Erythrose_4-phosphate + D-Xylulose_5-phosphate = D-Fructose_6-phosphate + D-Glyceraldehyde_3-phosphate Compartment : root EC Number : 2.2.1.1 Pathway : Pentose phosphate pathway Genes : AT3G60750.1 / AT3G60750.2 / AT2G45290.1 Identifier : TPI Trivial Name : triose phosphate isomerase Equation : D-Glyceraldehyde_3-phosphate = Glycerone-phosphate Compartment : mesophyll EC Number : 5.3.1.1 Pathway : Glycolysis Genes : AT3G55440.1 Identifier : TPI_plastid Trivial Name : triose-phosphate isomerase Equation : D-Glyceraldehyde_3-phosphate = Glycerone-phosphate Compartment : plastid EC Number : 5.3.1.1 Pathway : Calvin-Benson-Bassham cycle Genes : AT2G21170.2 / AT2G21170.1 Identifier : TPI_root Trivial Name : triose phosphate isomerase Equation : D-Glyceraldehyde_3-phosphate = Glycerone-phosphate Compartment : root EC Number : 5.3.1.1 Pathway : Glycolysis Genes : AT3G55440.1 Identifier : TRP Equation : 1*Chorismate + 1*L-Glutamine + 1*PRPP + 1*L-Serine => 1*L-Tryptophan + 2*Orthophosphate + 1*CO2 + 1*D-Glyceraldehyde_3-phosphate + 1*L-Glutamate + 2*h + 1*Pyruvate + 1*H2O Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT1G25083.1 / AT1G25155.1 / AT1G24807.1 / AT1G24909.1 / AT1G25220.1 / AT5G05730.1 / AT5G57890.1 / AT5G05730.2 / AT3G55870.1 / AT2G29690.1 / AT1G25220.2 / AT5G17990.1 / AT1G07780.1 / AT1G07780.2 / AT1G07780.5 / AT5G05590.1 / AT1G29410.2 / AT1G07780.3 / AT5G48220.1 / AT5G48220.2 / AT5G48220.3 / AT2G04400.1 / AT5G54810.1 / AT4G27070.1 / AT5G38530.1 / AT5G28237.1 / AT4G02610.1 Identifier : TRP_root Equation : 1*Chorismate + 1*L-Glutamine + 1*PRPP + 1*L-Serine => 1*L-Tryptophan + 2*Orthophosphate + 1*CO2 + 1*D-Glyceraldehyde_3-phosphate + 1*L-Glutamate + 2*h + 1*Pyruvate + 1*H2O Compartment : root Pathway : Amino acid synthesis Genes : AT1G25083.1 / AT1G25155.1 / AT1G24807.1 / AT1G24909.1 / AT1G25220.1 / AT5G05730.1 / AT5G57890.1 / AT5G05730.2 / AT3G55870.1 / AT2G29690.1 / AT1G25220.2 / AT5G17990.1 / AT1G07780.1 / AT1G07780.2 / AT1G07780.5 / AT5G05590.1 / AT1G29410.2 / AT1G07780.3 / AT5G48220.1 / AT5G48220.2 / AT5G48220.3 / AT2G04400.1 / AT5G54810.1 / AT4G27070.1 / AT5G38530.1 / AT5G28237.1 / AT4G02610.1 Identifier : Thr Equation : 1*L-Homoserine + 1*ATP + 1*H2O = 1*L-Threonine + 1*ADP + 1*Orthophosphate + 1*h Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT2G17265.1 / AT1G72810.1 / AT4G29840.1 Identifier : Thr_root Equation : 1*L-Homoserine + 1*ATP + 1*H2O = 1*L-Threonine + 1*ADP + 1*Orthophosphate + 1*h Compartment : root Pathway : Amino acid synthesis Genes : AT2G17265.1 / AT1G72810.1 / AT4G29840.1 Identifier : Tyr Equation : 1*Chorismate + 1*L-Glutamate + 1*NAD = 1*L-Tyrosine + 1*2-Oxoglutarate + 1*CO2 + 1*NADH Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT2G47485.1 / AT3G62650.1 / AT3G62650.2 / AT3G29200.1 / AT5G10870.1 / AT1G69370.1 / AT2G22250.2 / AT1G15710.1 / AT5G34930.1 Identifier : Tyr_root Equation : 1*Chorismate + 1*L-Glutamate + 1*NAD = 1*L-Tyrosine + 1*2-Oxoglutarate + 1*CO2 + 1*NADH Compartment : root Pathway : Amino acid synthesis Genes : AT2G47485.1 / AT3G62650.1 / AT3G62650.2 / AT3G29200.1 / AT5G10870.1 / AT1G69370.1 / AT2G22250.2 / AT1G15710.1 / AT5G34930.1 Identifier : UDP Equation : 1*UMP + 1*ATP = 1*UDP + 1*ADP Compartment : mesophyll EC Number : 3.6.1.5 Pathway : Pyrimidine ribonucleotides interconversion Genes : AT1G14240.1 / AT1G14240.2 / AT1G14240.3 / AT1G14240.4 / AT1G14230.1 / AT1G14250.1 / AT2G02970.1 / AT4G19180.1 Identifier : UDP_root Equation : 1*UMP + 1*ATP = 1*UDP + 1*ADP Compartment : root EC Number : 3.6.1.5 Pathway : Pyrimidine ribonucleotides interconversion Genes : AT1G14240.1 / AT1G14240.2 / AT1G14240.3 / AT1G14240.4 / AT1G14230.1 / AT1G14250.1 / AT2G02970.1 / AT4G19180.1 Identifier : UGD Trivial Name : UDP-glucose 6-dehydrogenase Equation : UDP-Glucose + 2*NAD + H2O => UDP-Glucuronate + 2*NADH + 3*h Compartment : mesophyll EC Number : 1.1.1.22 Pathway : UDP-glucuronate biosynthesis (from UDP-glucose) Genes : AT1G77120.1 / AT3G29360.1 / AT1G26570.1 / AT5G15490.1 / AT3G01010.1 / AT5G39320.1 / AT3G29360.2 Identifier : UGD_root Trivial Name : UDP-glucose 6-dehydrogenase Equation : UDP-Glucose + 2*NAD + H2O => UDP-Glucuronate + 2*NADH + 3*h Compartment : root EC Number : 1.1.1.22 Pathway : UDP-glucuronate biosynthesis (from UDP-glucose) Genes : AT1G77120.1 / AT3G29360.1 / AT1G26570.1 / AT5G15490.1 / AT3G01010.1 / AT5G39320.1 / AT3G29360.2 Identifier : UGP Trivial Name : UDP-glucose pyrophosphorylase Equation : UDP-Glucose + 2*Orthophosphate = UTP + D-Glucose_1-phosphate + H2O Compartment : mesophyll EC Number : 2.7.7.9 Pathway : UDP-glucose biosynthesis Genes : AT5G17310.2 / AT5G17310.1 / AT3G03250.1 / AT2G35020.1 / AT5G52560.1 Identifier : UGP_root Trivial Name : UDP-glucose pyrophosphorylase Equation : UDP-Glucose + 2*Orthophosphate = UTP + D-Glucose_1-phosphate + H2O Compartment : root EC Number : 2.7.7.9 Pathway : UDP-glucose biosynthesis Genes : AT5G17310.2 / AT5G17310.1 / AT3G03250.1 / AT2G35020.1 / AT5G52560.1 Identifier : UMP Equation : 1*Carbamoyl_phosphate + 1*L-Aspartate + 1*NAD + 1*PRPP => 1*UMP + 1*NADH + 1*CO2 + 3*Orthophosphate + 2*h Compartment : mesophyll Pathway : Uridine-5'-phosphate biosynthesis Genes : AT3G20330.1 / AT4G22930.1 / AT5G23300.1 / AT3G54470.1 / AT1G29900.1 Identifier : UMP_root Equation : 1*Carbamoyl_phosphate + 1*L-Aspartate + 1*NAD + 1*PRPP => 1*UMP + 1*NADH + 1*CO2 + 3*Orthophosphate + 2*h Compartment : root Pathway : Uridine-5'-phosphate biosynthesis Genes : AT3G20330.1 / AT4G22930.1 / AT5G23300.1 / AT3G54470.1 / AT1G29900.1 Identifier : UTP Equation : 1*UDP + 1*ATP = 1*UTP + 1*ADP Compartment : mesophyll EC Number : 3.6.1.5 Pathway : Pyrimidine ribonucleotides interconversion Genes : AT3G04080.1 / AT5G18280.2 / AT5G66005.2 / AT2G02970.1 / AT1G14250.1 / AT4G19180.1 / AT1G14230.1 / AT1G14240.4 / AT1G14240.1 / AT1G14240.2 / AT1G14240.3 / AT3G01610.1 / AT5G66005.3 / AT5G18280.1 Identifier : UTP_root Equation : 1*UDP + 1*ATP = 1*UTP + 1*ADP Compartment : root EC Number : 3.6.1.5 Pathway : Pyrimidine ribonucleotides interconversion Genes : AT3G04080.1 / AT5G18280.2 / AT5G66005.2 / AT2G02970.1 / AT1G14250.1 / AT4G19180.1 / AT1G14230.1 / AT1G14240.4 / AT1G14240.1 / AT1G14240.2 / AT1G14240.3 / AT3G01610.1 / AT5G66005.3 / AT5G18280.1 Identifier : VAL Equation : 2*Pyruvate + 1*L-Glutamate + 1*NADPH + 2*h = 1*L-Valine + 1*2-Oxoglutarate + 1*H2O + 1*NADP + 1*CO2 Compartment : mesophyll Pathway : Amino acid synthesis Genes : AT5G16290.1 / AT2G31810.1 / AT2G31810.2 / AT2G31810.3 / AT5G16290.2 / AT3G48560.1 / AT3G58610.1 / AT3G58610.2 / AT3G58610.3 / AT3G23940.1 / AT3G23940.2 / AT1G50090.1 / AT1G50110.1 / AT1G10070.3 / AT1G10070.2 / AT1G10060.1 / AT3G49680.2 / AT3G05190.1 / AT5G27410.2 / AT5G27410.1 / AT1G10060.3 / AT3G49680.1 / AT1G10070.1 / AT1G10060.2 / AT5G65780.1 Identifier : VAL_root Equation : 2*Pyruvate + 1*L-Glutamate + 1*NADPH + 2*h = 1*L-Valine + 1*2-Oxoglutarate + 1*H2O + 1*NADP + 1*CO2 Compartment : root Pathway : Amino acid synthesis Genes : AT5G16290.1 / AT2G31810.1 / AT2G31810.2 / AT2G31810.3 / AT5G16290.2 / AT3G48560.1 / AT3G58610.1 / AT3G58610.2 / AT3G58610.3 / AT3G23940.1 / AT3G23940.2 / AT1G50090.1 / AT1G50110.1 / AT1G10070.3 / AT1G10070.2 / AT1G10060.1 / AT3G49680.2 / AT3G05190.1 / AT5G27410.2 / AT5G27410.1 / AT1G10060.3 / AT3G49680.1 / AT1G10070.1 / AT1G10060.2 / AT5G65780.1 Identifier : cis-Hexa Equation : 1*Hexadecanoate + 1*NADH + 1/2*O2 + 1*h = 1*cis-Hexadecenoate + 1*NAD + 1*H2O Compartment : mesophyll Pathway : Fatty acids biosynthesis Identifier : cis-Hexa_root Equation : 1*Hexadecanoate + 1*NADH + 1/2*O2 + 1*h = 1*cis-Hexadecenoate + 1*NAD + 1*H2O Compartment : root Pathway : Fatty acids biosynthesis_root Identifier : cis-Octa Equation : 1*Octadecanoate + 1*NADH + 1*h + 1*O2 = 1*cis-Octadecenoate + 1*NAD + 2*H2O Compartment : mesophyll Pathway : Fatty acids biosynthesis Identifier : cis-Octa_root Equation : 1*Octadecanoate + 1*NADH + 1*h + 1*O2 = 1*cis-Octadecenoate + 1*NAD + 2*H2O Compartment : root Pathway : Fatty acids biosynthesis_root Identifier : pH_mesophyll Equation : H2O = h + OH Compartment : mesophyll Identifier : pH_mit_root Equation : H2O = h + OH Compartment : Mitochondria_root Identifier : pH_phloem Equation : H2O = h + OH Compartment : phloem Identifier : pH_root Equation : H2O = h + OH Compartment : root Identifier : suc_hydrolysis_glycolysis Equation : Sucrose + H2O + 4*NAD + 4*ADP + 4*Orthophosphate => 4*Pyruvate + 4*NADH + 4*h + 4*ATP + 4*H2O Compartment : phloem Identifier : vac_C Equation : CO2 + ATP + 2*H2O => Carbon_inorg + ADP + Orthophosphate + h Compartment : mesophyll Identifier : vac_C_root Equation : CO2 + ATP + 2*H2O => Carbon_inorg + ADP + Orthophosphate + h Compartment : root Pathway : Storage in vacuole Identifier : vac_N Equation : Nitrate + 2*ATP + 2*H2O => Nitrogen_inorg + 2*ADP + 2*Orthophosphate + h Compartment : mesophyll Identifier : vac_N_root Equation : Nitrate + 2*ATP + 2*H2O => Nitrogen_inorg + 2*ADP + 2*Orthophosphate + h Compartment : root Pathway : Storage in vacuole Identifier : vac_P Equation : Orthophosphate + 3*ATP + 3*H2O => Phosphorus_inorg + 3*ADP + 3*Orthophosphate + h Compartment : mesophyll Identifier : vac_P_root Equation : Orthophosphate + 3*ATP + 3*H2O => Phosphorus_inorg + 3*ADP + 3*Orthophosphate + h Compartment : root Pathway : Storage in vacuole Identifier : vac_S Equation : Sulfate + 3*ATP + 3*H2O => Sulfur_inorg + 3*ADP + 3*Orthophosphate + h Compartment : mesophyll Identifier : vac_S_root Equation : Sulfate + 3*ATP + 3*H2O => Sulfur_inorg + 3*ADP + 3*Orthophosphate + h Compartment : root Pathway : Storage in vacuole Identifier : vac_suc Equation : Sucrose + ATP + H2O => Sucrose_vac + ADP + Orthophosphate + h Compartment : mesophyll Identifier : vac_suc_root Equation : Sucrose + ATP + H2O => Sucrose_vac + ADP + Orthophosphate + h Compartment : root -------------------- TRANSPORT -------------------- Identifier : ATP/ADPtranslocator.mitochondrion Equation : 1*ATP_tmp_plant+1*ADP_Mitochondria_mesophyll<=1*ATP_Mitochondria_mesophyll+1*ADP_tmp_plant Compartment : Mitochondria_mesophyll - plant Identifier : ATP/ADPtranslocator.mitochondrion.root Equation : 1*ATP_tmp2_plant+1*ADP_Mitochondria_root<=1*ATP_Mitochondria_root+1*ADP_tmp2_plant Compartment : Mitochondria_root - plant Identifier : ATP/ADPtranslocator.plastid Equation : 1*ATP_plastid+1*ADP_tmp3_plant+1*Orthophosphate_tmp_plant=1*ATP_tmp3_plant+1*ADP_plastid+1*Orthophosphate_plastid Compartment : plastid - plant Identifier : ATP_synthase Trivial Name : F0F1-ATP synthase Equation : 1*ATP_plastid + 1*H2O_plastid + 3*h_plastid <= 1*ADP_plastid + 1*Orthophosphate_plastid + 4*H_in_tmp3_plant Compartment : plastid - plant EC Number : 3.6.3.14 Pathway : Transport Genes : ATCG00150.1 / ATMG01080.1 / ATCG00480.1 / AT2G07698.1 / AT5G08670.1 / AT1G78900.1 / AT2G07707.1 / ATMG01190.1 / AT5G08690.1 / AT2G33040.1 / AT2G07671.1 / ATCG00120.1 / AT5G08680.1 / ATMG00480.1 / AT1G78900.2 / AT4G04640.1 / AT1G15700.1 Identifier : ET Trivial Name : electron transfer Equation : Plastoquinol_plastid + 2*PC_ox_plastid + 2*h_plastid => Plastoquinone_plastid + 2*PC_red_plastid + 4*H_in_tmp3_plant Compartment : plastid - plant EC Number : 1.10.9.1 Pathway : Photosynthesis light reactions Identifier : H-ATPase2_root Equation : 1*h_root + 1*ATP_root + 1*OH_root => 1*h_tmp4_plant + 1*ADP_root + 1*Orthophosphate_root Compartment : root - plant Identifier : H-ATPase_mesophyll Equation : 1*h_mesophyll + 1*ATP_mesophyll + 1*OH_mesophyll => 1*h_tmp6_plant+ 1*ADP_mesophyll + 1*Orthophosphate_mesophyll Compartment : mesophyll - plant Pathway : Transport Identifier : H-ATPase_phloem1 Equation : 1*h_phloem + 1*ATP_phloem + 1*OH_phloem => 1*h_tmp6_plant+ 1*ADP_phloem + 1*Orthophosphate_phloem Compartment : phloem - plant Identifier : H-ATPase_phloem2 Equation : 1*h_phloem + 1*ATP_phloem + 1*OH_phloem => 1*h_tmp5_plant+ 1*ADP_phloem + 1*Orthophosphate_phloem Compartment : phloem - plant Identifier : H-ATPase_root Equation : 1*h_root + 1*ATP_root + 1*OH_root => 1*h_tmp5_plant + 1*ADP_root + 1*Orthophosphate_root Compartment : root - plant Pathway : Transport Identifier : OxPhos1.mitochondrion_mesophyll Equation : 5*h_Mitochondria_mesophyll+1*NADH_Mitochondria_mesophyll+1*CoQ_Mitochondria_mesophyll=>4*H_in_tmp_plant+1*NAD_Mitochondria_mesophyll+1*CoQH2_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : OxPhos1.mitochondrion_root Equation : 5*h_Mitochondria_root+1*NADH_Mitochondria_root+1*CoQ_Mitochondria_root=>4*H_in_tmp2_plant+1*NAD_Mitochondria_root+1*CoQH2_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : OxPhos2.mitochondrion_mesophyll Equation : 1*Succinate_Mitochondria_mesophyll+1*CoQ_Mitochondria_mesophyll=>1*Fumarate_Mitochondria_mesophyll+1*CoQH2_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : OxPhos2.mitochondrion_root Equation : 1*Succinate_Mitochondria_root+1*CoQ_Mitochondria_root=>1*Fumarate_Mitochondria_root+1*CoQH2_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : OxPhos3.mitochondrion_mesophyll Equation : 2*h_Mitochondria_mesophyll+1*CoQH2_Mitochondria_mesophyll+2*Cytochrom_c_ox_Mitochondria_mesophyll=>4*H_in_tmp_plant+1*CoQ_Mitochondria_mesophyll+2*Cytochrom_c_red_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : OxPhos3.mitochondrion_root Equation : 2*h_Mitochondria_root+1*CoQH2_Mitochondria_root+2*Cytochrom_c_ox_Mitochondria_root=>4*H_in_tmp2_plant+1*CoQ_Mitochondria_root+2*Cytochrom_c_red_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : OxPhos4.mitochondrion_mesophyll Equation : 8*h_Mitochondria_mesophyll+4*Cytochrom_c_red_Mitochondria_mesophyll+1*O2_Mitochondria_mesophyll=>4*H_in_tmp_plant+4*Cytochrom_c_ox_Mitochondria_mesophyll+2*H2O_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : OxPhos4.mitochondrion_root Equation : 8*h_Mitochondria_root+4*Cytochrom_c_red_Mitochondria_root+1*O2_Mitochondria_root=>4*H_in_tmp2_plant+4*Cytochrom_c_ox_Mitochondria_root+2*H2O_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : OxPhos5.mitochondrion_mesophyll Equation : 3*H_in_tmp_plant+1*ADP_Mitochondria_mesophyll+1*Orthophosphate_Mitochondria_mesophyll=>2*h_Mitochondria_mesophyll+1*ATP_Mitochondria_mesophyll+1*H2O_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : OxPhos5.mitochonrion_root Equation : 1*ATP_Mitochondria_root+1*OH_Mitochondria_root+3*h_Mitochondria_root<=1*ADP_Mitochondria_root+1*Orthophosphate_Mitochondria_root+3*H_in_tmp2_plant Compartment : Mitochondria_root - plant Identifier : PSI Trivial Name : photosystem I Equation : PC_red_plastid + Fd_ox_plastid + hv_plant => PC_ox_plastid + Fd_red_plastid Compartment : plastid - plant EC Number : 1.97.1.12 Pathway : Photosynthesis light reactions Identifier : PSII Trivial Name : photosystem II Equation : 2*H2O_plastid + 4*hv_plant + 2*Plastoquinone_plastid => 1*O2_plastid + 2*Plastoquinol_plastid Compartment : plastid - plant EC Number : 1.10.3.9 Pathway : Photosynthesis light reactions Identifier : T.ADP.mesophyll (mitochondria <=> mesophyll) Equation : ADP_mesophyll = ADP_tmp_plant Compartment : mesophyll - plant Identifier : T.ADP.plastid Equation : 1*ADP_tmp3_plant=1*ADP_mesophyll Compartment : mesophyll - plant Identifier : T.ADP.root (mitochondria <=> root) Equation : ADP_root = ADP_tmp2_plant Compartment : root - plant Identifier : T.ATP.mesophyll (mitochondria <=> mesophyll) Equation : ATP_mesophyll = ATP_tmp_plant Compartment : mesophyll - plant Identifier : T.ATP.plastid Equation : 1*ATP_tmp3_plant=1*ATP_mesophyll Compartment : mesophyll - plant Identifier : T.ATP.root (mitochondria <=> root) Equation : ATP_root = ATP_tmp2_plant Compartment : root - plant Identifier : T.Biomass.ext Equation : Biomass_plant_plant => Biomass_plant_external Compartment : plant - external Identifier : T.Biomass.mesophyll Equation : Biomass_mesophyll_mesophyll => Biomass_mesophyll_plant Compartment : mesophyll - plant Identifier : T.Biomass.root Equation : Biomass_root_root => Biomass_root_plant Compartment : root - plant Identifier : T.CO2.ext Equation : CO2_plant=CO2_external Compartment : plant - external Identifier : T.CO2.mesophyll Equation : CO2_mesophyll = CO2_plant Compartment : mesophyll - plant Identifier : T.CO2.mesophyll (mitochondria <=> mesophyll) Equation : CO2_mesophyll = CO2_tmp2_plant Compartment : mesophyll - plant Identifier : T.CO2.mesophyll(plastid<=>mesophyll) Equation : CO2_tmp_plant = CO2_mesophyll Compartment : mesophyll - plant Identifier : T.CO2.mitochondria (mitochondria <=> mesophyll) Equation : 1*CO2_tmp2_plant=1*CO2_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.CO2.mitochondria (mitochondria <=> root) Equation : 1*CO2_tmp3_plant=1*CO2_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.CO2.phloem Equation : CO2_phloem=CO2_plant Compartment : phloem - plant Identifier : T.CO2.plastid(plastid<=>mesophyll) Equation : CO2_plastid = CO2_tmp_plant Compartment : plastid - plant Identifier : T.CO2.root Equation : CO2_root = CO2_plant Compartment : root - plant Identifier : T.CO2.root (mitochondria <=> root) Equation : CO2_root = CO2_tmp3_plant Compartment : root - plant Identifier : T.Fumarate.mesophyll (mitochondria <=> mesophyll) Equation : Fumarate_mesophyll = Fumarate_tmp_plant Compartment : mesophyll - plant Identifier : T.Fumarate.mitochondria (mitochondria <=> mesophyll) Equation : 1*Fumarate_tmp_plant=1*Fumarate_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.Fumarate.mitochondria (mitochondria <=> root) Equation : 1*Fumarate_tmp2_plant=1*Fumarate_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.Fumarate.root (mitochondria <=> root) Equation : Fumarate_root = Fumarate_tmp2_plant Compartment : root - plant Identifier : T.GAP.plastid Equation : 1*D-Glyceraldehyde_3-phosphate_plastid+1*Orthophosphate_tmp_plant=1*D-Glyceraldehyde_3-phosphate_tmp_plant+1*Orthophosphate_plastid Compartment : plastid - plant Identifier : T.GAP.plastid2 Equation : 1*D-Glyceraldehyde_3-phosphate_tmp_plant=1*D-Glyceraldehyde_3-phosphate_mesophyll Compartment : mesophyll - plant Identifier : T.Glu.plastid1 Equation : 1*L-Glutamate_tmp_plant=1*L-Glutamate_mesophyll Compartment : mesophyll - plant Identifier : T.Glu.plastid2 Equation : 1*L-Glutamate_plastid=1*L-Glutamate_tmp_plant Compartment : plastid - plant Identifier : T.Glutamine.plastid1 Equation : 1*L-Glutamine_tmp_plant=1*L-Glutamine_mesophyll Compartment : mesophyll - plant Identifier : T.Glutamine.plastid2 Equation : 1*L-Glutamine_tmp_plant=1*L-Glutamine_plastid Compartment : plastid - plant Identifier : T.Glyceraate.mesophyll Equation : D-Glycerate_mesophyll=D-Glycerate_plant Compartment : mesophyll - plant Identifier : T.Glycerate.plastid Equation : 1*D-Glycerate_plant=>1*D-Glycerate_plastid Compartment : plastid - plant Identifier : T.Glycolate.mesophyll Equation : Glycolate_plant=Glycolate_mesophyll Compartment : mesophyll - plant Identifier : T.Glycolate.plastid Equation : 1*Glycolate_plastid=>1*Glycolate_plant Compartment : plastid - plant Identifier : T.H2O.ext Equation : H2O_external => H2O_plant Compartment : plant - external Pathway : Transport Identifier : T.H2O.ext2 Equation : H2O_tmp6_plant => H2O_external Compartment : plant - external Identifier : T.H2O.mesophyll (mitochondria <=> mesophyll) Equation : H2O_mesophyll = H2O_tmp2_plant Compartment : mesophyll - plant Identifier : T.H2O.mesophyll(plastid<=>mesophyll) Equation : H2O_tmp_plant = H2O_mesophyll Compartment : mesophyll - plant Identifier : T.H2O.mesophyll.load Equation : H2O_tmp5_plant => H2O_mesophyll Compartment : mesophyll - plant Identifier : T.H2O.mesophyll.unload Equation : H2O_mesophyll => H2O_tmp6_plant Compartment : mesophyll - plant Identifier : T.H2O.mitochondria (mitochondria <=> mesophyll) Equation : 1*H2O_tmp2_plant=1*H2O_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.H2O.mitochondria (mitochondria <=> root) Equation : 1*H2O_tmp3_plant=1*H2O_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.H2O.phloem.load Equation : H2O_tmp4_plant => H2O_phloem Compartment : phloem - plant Identifier : T.H2O.phloem.unload Equation : H2O_phloem => H2O_tmp5_plant Compartment : phloem - plant Identifier : T.H2O.plastid(plastid<=>mesophyll) Equation : H2O_plastid = H2O_tmp_plant Compartment : plastid - plant Identifier : T.H2O.root (mitochondria <=>root) Equation : H2O_root = H2O_tmp3_plant Compartment : root - plant Identifier : T.H2O.root.load Equation : H2O_plant => H2O_root Compartment : root - plant Identifier : T.H2O.root.unload Equation : H2O_root => H2O_tmp4_plant Compartment : root - plant Identifier : T.H2S.plastid1 Equation : 1*H2S_tmp_plant=1*H2S_mesophyll Compartment : mesophyll - plant Identifier : T.H2S.plastid2 Equation : 1*H2S_plastid=>1*H2S_tmp_plant Compartment : plastid - plant Identifier : T.Isocitrate.mesophyll (mitochondria <=> mesophyll) Equation : Isocitrate_mesophyll = Isocitrate_tmp_plant Compartment : mesophyll - plant Identifier : T.Isocitrate.mitochondria (mitochondria <=> mesophyll) Equation : 1*Isocitrate_tmp_plant=1*Isocitrate_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.Isocitrate.mitochondria (mitochondria <=> root) Equation : 1*Isocitrate_tmp2_plant=1*Isocitrate_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.Isocitrate.root (mitochondria <=> root) Equation : Isocitrate_root = Isocitrate_tmp2_plant Compartment : root - plant Identifier : T.KG.plastid1 Equation : 1*2-Oxoglutarate_tmp3_plant=1*2-Oxoglutarate_mesophyll Compartment : mesophyll - plant Identifier : T.KG.plastid2 Equation : 1*2-Oxoglutarate_tmp3_plant=1*2-Oxoglutarate_plastid Compartment : plastid - plant Identifier : T.Malate.mesophyll(plastid<=>mesophyll) Equation : 1*L-Malate_mesophyll=1*L-Malate_tmp3_plant Compartment : mesophyll - plant Identifier : T.Malate.mit Equation : 1*L-Malate_mesophyll=1*L-Malate_tmp_plant Compartment : mesophyll - plant Identifier : T.Malate.mit2 Equation : 1*L-Malate_tmp_plant=>1*L-Malate_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.Malate.mitochondria(mitochondria<=>root) Equation : 1*L-Malate_tmp2_plant=>1*L-Malate_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.Malate.plastid Equation : 1*L-Malate_plastid=>1*L-Malate_tmp3_plant Compartment : plastid - plant Identifier : T.Malate.root(mitochondria<=>root) Equation : 1*L-Malate_root=1*L-Malate_tmp2_plant Compartment : root - plant Identifier : T.N.ext Equation : 1*Nitrate_plant+1*h_tmp4_plant<=1*Nitrate_external+1*h_external Compartment : plant - external Identifier : T.N.mesophyll.load Equation : 1*Nitrate_tmp3_plant + 1*h_tmp6_plant => 1*Nitrate_mesophyll+1*h_mesophyll Compartment : mesophyll - plant Identifier : T.N.phloem.load Equation : 1*Nitrate_tmp2_plant + 1*h_tmp5_plant => 1*Nitrate_phloem+1*h_phloem Compartment : phloem - plant Identifier : T.N.phloem.unload Equation : Nitrate_phloem => Nitrate_tmp3_plant Compartment : phloem - plant Identifier : T.N.root.load Equation : 1*Nitrate_plant + 1*h_tmp4_plant => 1*Nitrate_root+1*h_root Compartment : root - plant Identifier : T.N.root.unload Equation : Nitrate_root => Nitrate_tmp2_plant Compartment : root - plant Identifier : T.NH4.mesophyll Equation : 1*NH4_plant=1*NH4_mesophyll Compartment : mesophyll - plant Identifier : T.NH4.plastid Equation : 1*NH4_plastid<=1*NH4_plant Compartment : plastid - plant Identifier : T.NO2.plastid1 Equation : 1*Nitrite_mesophyll=1*Nitrite_tmp_plant Compartment : mesophyll - plant Identifier : T.NO2.plastid2 Equation : 1*Nitrite_tmp_plant=>1*Nitrite_plastid Compartment : plastid - plant Identifier : T.O2.ext Equation : O2_plant=O2_external Compartment : plant - external Identifier : T.O2.mesophyll Equation : O2_mesophyll = O2_plant Compartment : mesophyll - plant Identifier : T.O2.mesophyll (mitochondria <=> mesophyll) Equation : O2_mesophyll = O2_tmp2_plant Compartment : mesophyll - plant Identifier : T.O2.mesophyll (palstid <=> mesophyll) Equation : O2_tmp_plant = O2_mesophyll Compartment : mesophyll - plant Identifier : T.O2.mitochondria (mitochondria <=> mesophyll) Equation : 1*O2_tmp2_plant=1*O2_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.O2.mitochondria (mitochondria <=> root) Equation : 1*O2_tmp3_plant=1*O2_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.O2.phloem Equation : O2_phloem=O2_plant Compartment : phloem - plant Identifier : T.O2.plastid (palstid <=> mesophyll) Equation : O2_plastid = O2_tmp_plant Compartment : plastid - plant Identifier : T.O2.root Equation : O2_root = O2_plant Compartment : root - plant Identifier : T.O2.root (mitochondria <=> root) Equation : O2_root = O2_tmp3_plant Compartment : root - plant Identifier : T.OAA.mesophyll (mitochondrion <=> mesophyll) Equation : 1*Oxaloacetate_tmp2_plant=1*Oxaloacetate_mesophyll Compartment : mesophyll - plant Identifier : T.OAA.mesophyll (palstid <=> mesophyll) Equation : 1*Oxaloacetate_mesophyll=1*Oxaloacetate_tmp_plant Compartment : mesophyll - plant Identifier : T.OAA.mitochondrion Equation : 1*Oxaloacetate_tmp2_plant<=1*Oxaloacetate_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.OAA.mitochondrion (mitochondrion <=> root) Equation : 1*Oxaloacetate_Mitochondria_root=>1*Oxaloacetate_tmp3_plant Compartment : Mitochondria_root - plant Identifier : T.OAA.plastid Equation : 1*Oxaloacetate_tmp_plant=>1*Oxaloacetate_plastid Compartment : plastid - plant Identifier : T.OAA.root (mitochondrion <=> root) Equation : 1*Oxaloacetate_tmp3_plant=1*Oxaloacetate_root Compartment : root - plant Identifier : T.Orthophosphate.mesophyll (mesophyll<=>mitochondria) Equation : Orthophosphate_mesophyll = Orthophosphate_tmp2_plant Compartment : mesophyll - plant Identifier : T.Orthophosphate.root (root<=>mitochondria) Equation : Orthophosphate_root = Orthophosphate_tmp3_plant Compartment : root - plant Identifier : T.Oxoglutarate.mesophyll(mitochondria<=>mesophyll) Equation : 1*2-Oxoglutarate_mesophyll=1*2-Oxoglutarate_tmp_plant Compartment : mesophyll - plant Identifier : T.Oxoglutarate.mitochondria(mitochondria<=>mesophyll) Equation : 1*2-Oxoglutarate_tmp_plant=1*2-Oxoglutarate_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.Oxoglutarate.mitochondria(mitochondria<=>root) Equation : 1*2-Oxoglutarate_tmp2_plant=1*2-Oxoglutarate_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.Oxoglutarate.root(mitochondria<=>root) Equation : 1*2-Oxoglutarate_root=1*2-Oxoglutarate_tmp2_plant Compartment : root - plant Identifier : T.P.ext Equation : 1*Orthophosphate_plant+1*h_tmp4_plant<=1*Orthophosphate_external+1*h_external Compartment : plant - external Identifier : T.P.mesophyll.load Equation : 1*Orthophosphate_tmp5_plant+1*h_tmp6_plant => 1*Orthophosphate_mesophyll+1*h_mesophyll Compartment : mesophyll - plant Identifier : T.P.mit_mesophyll Equation : 1*Orthophosphate_tmp2_plant+1*H_in_tmp_plant=>1*Orthophosphate_Mitochondria_mesophyll+1*h_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.P.mitochondria_root2 Equation : 1*Orthophosphate_tmp3_plant+1*H_in_tmp2_plant=>1*Orthophosphate_Mitochondria_root+1*h_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.P.phloem.load Equation : 1*Orthophosphate_tmp4_plant + 1*h_tmp5_plant => 1*Orthophosphate_phloem+1*h_phloem Compartment : phloem - plant Identifier : T.P.phloem.unload Equation : Orthophosphate_phloem => Orthophosphate_tmp5_plant Compartment : phloem - plant Identifier : T.P.plastid Equation : 1*Orthophosphate_mesophyll=1*Orthophosphate_tmp_plant Compartment : mesophyll - plant Identifier : T.P.plastid2 Equation : 1*Orthophosphate_tmp_plant=1*Orthophosphate_plastid Compartment : plastid - plant Identifier : T.P.root.load Equation : 1*Orthophosphate_plant + 1*h_tmp4_plant => 1*Orthophosphate_root+1*h_root Compartment : root - plant Identifier : T.P.root.unload Equation : Orthophosphate_root => Orthophosphate_tmp4_plant Compartment : root - plant Identifier : T.Pyruvate.mesophyll (mesophyll<=>mitochondria) Equation : Pyruvate_mesophyll = Pyruvate_tmp_plant Compartment : mesophyll - plant Identifier : T.Pyruvate.mit_mesophyll2 Equation : 1*Pyruvate_tmp_plant+1*H_in_tmp_plant=>1*Pyruvate_Mitochondria_mesophyll+1*h_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.Pyruvate.mitochondria_root Equation : 1*Pyruvate_tmp2_plant+1*H_in_tmp2_plant=>1*Pyruvate_Mitochondria_root+1*h_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.Pyruvate.root (root<=>mitochondria) Equation : Pyruvate_root = Pyruvate_tmp2_plant Compartment : root - plant Identifier : T.S.ext Equation : 1*Sulfate_plant+1*h_tmp4_plant<=1*Sulfate_external+1*h_external Compartment : plant - external Identifier : T.S.mesophyll.load Equation : 1*Sulfate_tmp3_plant + 1*h_tmp6_plant => 1*Sulfate_mesophyll + 1*h_mesophyll Compartment : mesophyll - plant Identifier : T.S.phloem.load Equation : 1*Sulfate_tmp2_plant + 1*h_tmp5_plant => 1*Sulfate_phloem+1*h_phloem Compartment : phloem - plant Identifier : T.S.phloem.unload Equation : Sulfate_phloem => Sulfate_tmp3_plant Compartment : phloem - plant Identifier : T.S.root.load Equation : 1*Sulfate_plant + 1*h_tmp4_plant => 1*Sulfate_root+1*h_root Compartment : root - plant Identifier : T.S.root.unload Equation : Sulfate_root => Sulfate_tmp2_plant Compartment : root - plant Identifier : T.Starch.Plastid (Plastid <=> Plant) Equation : 1*Starch_plastid<=1*Starch_plant Compartment : plastid - plant Identifier : T.Starch.plant(plant<=>mesophyll) Equation : 1*Starch_tmp_plant=1*Starch_mesophyll Compartment : mesophyll - plant Identifier : T.Starch.plastid(plastid<=>mesophyll) Equation : 1*Starch_plastid=>1*Starch_tmp_plant Compartment : plastid - plant Identifier : T.Sucrose.mesophyll Equation : Sucrose_mesophyll = Sucrose_plant Compartment : mesophyll - plant Pathway : Transport Genes : AT2G39060.1 / AT5G50790.1 / AT3G48740.1 / AT5G23660.1 / AT5G50800.1 / AT4G25010.1 / AT5G13170.1 Identifier : T.Sucrose.phloem.load Equation : Sucrose_plant + h_tmp6_plant => Sucrose_phloem + h_phloem Compartment : phloem - plant Identifier : T.Sucrose.phloem.unload Equation : Sucrose_phloem = Sucrose_tmp_plant Compartment : phloem - plant Identifier : T.Sucrose.root Equation : Sucrose_root + h_root = Sucrose_tmp_plant + h_tmp5_plant Compartment : root - plant Pathway : Transport Genes : AT1G71880.1 / AT1G22710.1 / AT2G02860.1 / AT1G09960.1 / AT1G71890.1 / AT5G43610.1 / AT1G66570.1 / AT2G14670.1 / AT5G06170.1 / AT3G19930.1 Identifier : T.Sulfate.plastid Equation : 1*Sulfate_mesophyll=1*Sulfate_tmp_plant Compartment : mesophyll - plant Identifier : T.Sulfate.plastid2 Equation : 1*Sulfate_plastid<=1*Sulfate_tmp_plant Compartment : plastid - plant Identifier : T.alpha-Maltose.mesophyll(plastid<=>mesophyll) Equation : alpha-Maltose_tmp_plant =alpha-Maltose_mesophyll Compartment : mesophyll - plant Identifier : T.alpha-Maltose.plastid(plastid<=>mesophyll) Equation : 1*alpha-Maltose_plastid=>1*alpha-Maltose_tmp_plant Compartment : plastid - plant Identifier : T.h.ext Equation : 1*h_tmp4_plant => 1*h_external Compartment : plant - external Pathway : Transport Identifier : T.h.mit_mesphyll1 Equation : 1*h_mesophyll=1*h_tmp2_plant Compartment : mesophyll - plant Identifier : T.h.mit_mesphyll2 Equation : 1*h_tmp2_plant=1*h_Mitochondria_mesophyll Compartment : Mitochondria_mesophyll - plant Identifier : T.h.mitochondria_root1 Equation : 1*h_root=1*h_tmp3_plant Compartment : root - plant Identifier : T.h.mitochondria_root2 Equation : 1*h_tmp3_plant=1*h_Mitochondria_root Compartment : Mitochondria_root - plant Identifier : T.h.plastid_mesophyll1 Equation : 1*h_tmp_plant=1*h_mesophyll Compartment : mesophyll - plant Identifier : T.h.plastid_mesophyll2 Equation : 1*h_plastid=1*h_tmp_plant Compartment : plastid - plant Identifier : T.hv.ext Equation : 1*hv_plant<=1*hv_external Compartment : plant - external Identifier : T.starch.ext Equation : 1*Starch_plant<=1*Starch_external Compartment : plant - external -------------------- POLYMERISATION -------------------- Identifier : Ash Trivial Name : ash Equation : 75.68031*Carbon_inorg+10.94386*Phosphorus_inorg+2.73596*Sulfur_inorg+10.63986*Nitrogen_inorg=ash Compartment : mesophyll Identifier : Ash_root Trivial Name : ash Equation : 75.68031*Carbon_inorg+10.94386*Phosphorus_inorg+2.73596*Sulfur_inorg+10.63986*Nitrogen_inorg=ash Compartment : root Identifier : Biomass_mesophyll Trivial Name : biomass biosynthesis Equation : 20*Cellulose+10*Starch+9*Lipid+25*Protein+RNA+20*pectin+12*Sucrose_vac+3*ash=Biomass_mesophyll Compartment : mesophyll Identifier : Biomass_plant Trivial Name : Biomass_plant Equation : 14.1804*Biomass_root+85.8196*Biomass_mesophyll=Biomass_plant Compartment : plant Identifier : Biomass_root Trivial Name : biomass synthesis Equation : 30*Cellulose+9*Lipid+RNA+25*Protein+20*pectin+12*Sucrose_vac+3*ash=Biomass_root Compartment : root Identifier : Lipidpoly Trivial Name : Lipid polymerisation Equation : 0.2892*Hexadecanoate+0.6192*cis-Octadecenoate+1.041*cis-Hexadecenoate+0.0744*Octadecanoate+0.0018*Linoleate+0.9744*Glycerol=Lipid+2*H2O Coproducts : 1*H2O Compartment : mesophyll Identifier : Lipidpoly_root Trivial Name : Lipid polymerisation Equation : 0.2892*Hexadecanoate+0.6192*cis-Octadecenoate+1.041*cis-Hexadecenoate+0.0744*Octadecanoate+0.0018*Linoleate+0.9744*Glycerol=Lipid+2*H2O Coproducts : 1*H2O Compartment : root Identifier : Proteinpoly Trivial Name : Protein polymerisation Equation : 33.3*L-Glutamate+33.3*L-Glutamine+3*L-Proline+8.4*L-Arginine+4.5*L-Lysine+25.2*L-Serine+9.3*Glycine+5.4*L-Cysteine+28.2*L-Aspartate+28.2*L-Asparagine+20.4*L-Threonine+2.25*L-Methionine+10.2*L-Isoleucine+36.3*L-Alanine+6*L-Valine+20.4*L-Leucine+9.6*L-Phenylalanine+9*L-Tyrosine+2.25*L-Tryptophan+4.8*L-Histidine+1196*ATP+897*H2O=Protein+1196*ADP+1196*Orthophosphate+1196*h Side Equation : 4*ATP+ 4*H2O= 4*ADP+ 4*Orthophosphate+ 4*h Coproducts : 1*H2O Compartment : mesophyll Identifier : Proteinpoly_root Trivial Name : Protein polymerisation Equation : 33.3*L-Glutamate+33.3*L-Glutamine+3*L-Proline+8.4*L-Arginine+4.5*L-Lysine+25.2*L-Serine+9.3*Glycine+5.4*L-Cysteine+28.2*L-Aspartate+28.2*L-Asparagine+20.4*L-Threonine+2.25*L-Methionine+10.2*L-Isoleucine+36.3*L-Alanine+6*L-Valine+20.4*L-Leucine+9.6*L-Phenylalanine+9*L-Tyrosine+2.25*L-Tryptophan+4.8*L-Histidine+1196*ATP+897*H2O=Protein+1196*ADP+1196*Orthophosphate+1196*h Side Equation : 4*ATP+ 4*H2O= 4*ADP+ 4*Orthophosphate+ 4*h Coproducts : 1*H2O Compartment : root Identifier : RNApoly Trivial Name : RNA polymerisation Equation : 3200.32*AMP+3300.33*GMP+2600.26*UMP+900.09*CMP+10000*ATP+10000*H2O=RNA+10000*ADP+10000*Orthophosphate+10000*h Side Equation : 1*ATP+ 1*H2O= 1*ADP+ 1*Orthophosphate+ 1*h Compartment : mesophyll Identifier : RNApoly_root Trivial Name : RNA polymerisation Equation : 3200.32*AMP+3300.33*GMP+2600.26*UMP+900.09*CMP+10000*ATP+10000*H2O=RNA+10000*ADP+10000*Orthophosphate+10000*h Side Equation : 1*ATP+ 1*H2O= 1*ADP+ 1*Orthophosphate+ 1*h Compartment : root Identifier : cellulose_mesophyll Trivial Name : cellulose biosynthesis Equation : 1000*UDP-Glucose=Cellulose+1000*UDP Coproducts : 1*UDP EC Number : 2.4.1.12 Compartment : mesophyll Identifier : cellulose_root Trivial Name : cellulose biosynthesis Equation : 1000*UDP-Glucose=Cellulose+1000*UDP Coproducts : 1*UDP EC Number : 2.4.1.12 Compartment : root Identifier : pectin_mesophyll Trivial Name : homogalacturanan biosynthesis Equation : 300*UDP-Glucuronate=pectin+300*UDP Coproducts : 1*UDP Compartment : mesophyll Identifier : pectin_root Trivial Name : homogalacturanan biosynthesis Equation : 300*UDP-Glucuronate=pectin+300*UDP Coproducts : 1*UDP Compartment : root Identifier : starch synthase Trivial Name : starch synthase Equation : 600*ADP-Glucose=Starch+600*ADP Coproducts : 1*ADP EC Number : 2.4.1.21 Compartment : plastid -------------------- COMPOUNDS -------------------- Identifier : 1,3-bisphospho-D-Glycerate Kegg ID : C00236 Compartment : mesophyll Identifier : 1,3-bisphospho-D-Glycerate Kegg ID : C00236 Compartment : plastid Identifier : 1,3-bisphospho-D-Glycerate Kegg ID : C00236 Compartment : root Identifier : 2-Oxoglutarate Trivial Name : 2-oxoglutarate, 2OG, alpha-ketoglutarate, a-KG Kegg ID : C00026 Compartment : plastid Identifier : 2-Oxoglutarate Trivial Name : 2-oxoglutarate, 2OG, alpha-ketoglutarate, a-KG Kegg ID : C00026 Compartment : Mitochondria_mesophyll Identifier : 2-Oxoglutarate Trivial Name : 2-oxoglutarate, 2OG, alpha-ketoglutarate, a-KG Kegg ID : C00026 Compartment : root Identifier : 2-Oxoglutarate Trivial Name : 2-oxoglutarate, 2OG, alpha-ketoglutarate, a-KG Kegg ID : C00026 Compartment : mesophyll Identifier : 2-Oxoglutarate Trivial Name : 2-oxoglutarate, 2OG, alpha-ketoglutarate, a-KG Kegg ID : C00026 Compartment : Mitochondria_root Identifier : 2-Oxoglutarate_tmp Trivial Name : 2-oxoglutarate, 2OG, alpha-ketoglutarate, a-KG Kegg ID : C00026 Compartment : plant Identifier : 2-Oxoglutarate_tmp2 Trivial Name : 2-oxoglutarate, 2OG, alpha-ketoglutarate Kegg ID : C00026 Compartment : plant Identifier : 2-Oxoglutarate_tmp3 Trivial Name : 2-oxoglutarate, 2OG, alpha-ketoglutarate, a-KG Kegg ID : C00026 Compartment : plant Identifier : 3-Hydroxypyruvate Trivial Name : 3-hydroxypyruvate Kegg ID : C00168 Compartment : mesophyll Identifier : 3-Methyl-2-oxobutanoate Trivial Name : 2-oxo-3-methylbutanoate / alpha-ketoisovalerate / alpha-ketovaline Kegg ID : C00141 Compartment : mesophyll Identifier : 3-Methyl-2-oxobutanoate Trivial Name : 2-oxo-3-methylbutanoate / alpha-ketoisovalerate / alpha-ketovaline Kegg ID : C00141 Compartment : root Identifier : 5,10-Methylenetetrahydrofolate Trivial Name : 5,10-methylenetetrahydrofolate Kegg ID : C00143 Compartment : root Identifier : 5,10-Methylenetetrahydrofolate Trivial Name : 5,10-methylenetetrahydrofolate Kegg ID : C00143 Compartment : mesophyll Identifier : 5-Formyltetrahydrofolate Trivial Name : 5-formyltetrahydrofolate Kegg ID : C03479 Compartment : root Identifier : 5-Formyltetrahydrofolate Trivial Name : 5-formyltetrahydrofolate Kegg ID : C03479 Compartment : mesophyll Identifier : 5-Methyltetrahydrofolate Trivial Name : 5-methyltetrahydrofolate Kegg ID : C00440 Compartment : mesophyll Identifier : 5-Methyltetrahydrofolate Trivial Name : 5-methyltetrahydrofolate Kegg ID : C00440 Compartment : root Identifier : 6-Phosphogluco-amylopectin Compartment : plastid Identifier : 6-phospho-D-Gluconate Trivial Name : 6-phospho-D-Gluconate, D-gluconate 6-phosphate Kegg ID : C00345 Compartment : root Identifier : 6-phospho-D-Gluconate Trivial Name : 6-phospho-D-Gluconate, D-gluconate 6-phosphate Kegg ID : C00345 Compartment : mesophyll Identifier : 6-phospho-D-Gluconate Trivial Name : 6-phospho-D-Gluconate, D-gluconate 6-phosphate Kegg ID : C00345 Compartment : plastid Identifier : ADP Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : root Identifier : ADP Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : mesophyll Identifier : ADP Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : phloem Identifier : ADP Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : plastid Identifier : ADP Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : Mitochondria_root Identifier : ADP Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : Mitochondria_mesophyll Identifier : ADP-Glucose Trivial Name : ADP-Glucose Kegg ID : C00498 Compartment : plastid Identifier : ADP_tmp Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : plant Identifier : ADP_tmp2 Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : plant Identifier : ADP_tmp3 Trivial Name : Adenosine 5'-diphosphate Kegg ID : C00008 Compartment : plant Identifier : AICAR Trivial Name : 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide Kegg ID : C04677 Compartment : root Identifier : AICAR Trivial Name : 5'-phosphoribosyl-5-amino-4-imidazolecarboxamide Kegg ID : C04677 Compartment : mesophyll Identifier : AMP Trivial Name : Adenosine 5'-monophosphate Kegg ID : C00020 Compartment : root Identifier : AMP Trivial Name : Adenosine 5'-monophosphate Kegg ID : C00020 Compartment : mesophyll Identifier : AMP Trivial Name : Adenosine 5'-monophosphate Kegg ID : C00020 Compartment : plastid Identifier : APS Trivial Name : Adenosine 5'-phosphosulfate Kegg ID : C00224 Compartment : plastid Identifier : ATP Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : phloem Identifier : ATP Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : mesophyll Identifier : ATP Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : Mitochondria_root Identifier : ATP Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : root Identifier : ATP Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : Mitochondria_mesophyll Identifier : ATP Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : plastid Identifier : ATP_tmp Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : plant Identifier : ATP_tmp2 Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : plant Identifier : ATP_tmp3 Trivial Name : Adenosine 5'-triphosphate Kegg ID : C00002 Compartment : plant Identifier : Acetate Trivial Name : acetate Kegg ID : C00033 Compartment : mesophyll Identifier : Acetate Trivial Name : acetate Kegg ID : C00033 Compartment : root Identifier : Acetyl-CoA Trivial Name : acetyl-CoA Kegg ID : C00024 Compartment : Mitochondria_root Identifier : Acetyl-CoA Trivial Name : acetyl-CoA Kegg ID : C00024 Compartment : Mitochondria_mesophyll Identifier : Acetyl-CoA Trivial Name : acetyl-CoA Kegg ID : C00024 Compartment : mesophyll Identifier : Acetyl-CoA Trivial Name : acetyl-CoA Kegg ID : C00024 Compartment : root Identifier : Biomass_mesophyll Compartment : plant Identifier : Biomass_mesophyll Compartment : mesophyll Identifier : Biomass_plant Compartment : external Identifier : Biomass_plant Compartment : plant Identifier : Biomass_root Compartment : root Identifier : Biomass_root Compartment : plant Identifier : CMP Trivial Name : Cytidine-3'-monophosphate Kegg ID : C00055 Compartment : root Identifier : CMP Trivial Name : Cytidine-3'-monophosphate Kegg ID : C00055 Compartment : mesophyll Identifier : CO2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : plant Identifier : CO2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : Mitochondria_mesophyll Identifier : CO2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : Mitochondria_root Identifier : CO2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : root Identifier : CO2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : phloem Identifier : CO2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : external Identifier : CO2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : plastid Identifier : CO2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : mesophyll Identifier : CO2_tmp Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : plant Identifier : CO2_tmp2 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : plant Identifier : CO2_tmp3 Trivial Name : carbon dioxide Kegg ID : C00011 Compartment : plant Identifier : CTP Trivial Name : cytidine 5'-triphosphate Kegg ID : C00063 Compartment : root Identifier : CTP Trivial Name : cytidine 5'-triphosphate Kegg ID : C00063 Compartment : mesophyll Identifier : Carbamoyl_phosphate Trivial Name : carbamoyl phosphate Kegg ID : C00169 Compartment : root Identifier : Carbamoyl_phosphate Trivial Name : carbamoyl phosphate Kegg ID : C00169 Compartment : mesophyll Identifier : Carbon_inorg Trivial Name : inorganic carbon in content of H2CO3 Compartment : root Identifier : Carbon_inorg Trivial Name : inorganic carbon in content of H2CO3 Compartment : mesophyll Identifier : Cellulose Compartment : root Identifier : Cellulose Compartment : mesophyll Identifier : Chorismate Trivial Name : chorismate Kegg ID : C00251 Compartment : root Identifier : Chorismate Trivial Name : chorismate Kegg ID : C00251 Compartment : mesophyll Identifier : CoA Trivial Name : coenzyme A Kegg ID : C00010 Compartment : mesophyll Identifier : CoA Trivial Name : coenzyme A Kegg ID : C00010 Compartment : root Identifier : CoA Trivial Name : coenzyme A Kegg ID : C00010 Compartment : Mitochondria_root Identifier : CoA Trivial Name : coenzyme A Kegg ID : C00010 Compartment : Mitochondria_mesophyll Identifier : CoQ Trivial Name : oxidized coenzyme Q = ubiquinone Kegg ID : C00399 Compartment : phloem Identifier : CoQH2 Trivial Name : reduced coenzyme Q = ubiquinol Kegg ID : C00390 Compartment : phloem Identifier : CoQH2_Mitochondria Trivial Name : reduced coenzyme Q = ubiquinol Kegg ID : C00390 Compartment : root Identifier : CoQH2_Mitochondria Trivial Name : reduced coenzyme Q = ubiquinol Kegg ID : C00390 Compartment : mesophyll Identifier : CoQ_Mitochondria Trivial Name : oxidized coenzyme Q = ubiquinone Kegg ID : C00399 Compartment : mesophyll Identifier : CoQ_Mitochondria Trivial Name : oxidized coenzyme Q = ubiquinone Kegg ID : C00399 Compartment : root Identifier : Cyt_ox Compartment : phloem Identifier : Cyt_red Compartment : phloem Identifier : Cytochrom_c_ox_Mitochondria Compartment : mesophyll Identifier : Cytochrom_c_ox_Mitochondria Compartment : root Identifier : Cytochrom_c_red_Mitochondria Compartment : mesophyll Identifier : Cytochrom_c_red_Mitochondria Compartment : root Identifier : D-Erythrose_4-phosphate Trivial Name : D-Erythrose 4-phosphate Kegg ID : C00279 Compartment : root Identifier : D-Erythrose_4-phosphate Trivial Name : D-Erythrose 4-phosphate Kegg ID : C00279 Compartment : mesophyll Identifier : D-Erythrose_4-phosphate Trivial Name : D-Erythrose 4-phosphate Kegg ID : C00279 Compartment : plastid Identifier : D-Fructose_1,6-bisphosphate Trivial Name : beta-D-Fructose 1,6-bisphosphate Kegg ID : C05378 Compartment : root Identifier : D-Fructose_1,6-bisphosphate Trivial Name : beta-D-Fructose 1,6-bisphosphate Kegg ID : C05378 Compartment : mesophyll Identifier : D-Fructose_1,6-bisphosphate Trivial Name : beta-D-Fructose 1,6-bisphosphate Kegg ID : C05378 Compartment : plastid Identifier : D-Fructose_6-phosphate Trivial Name : D-Fructose 6-phosphate Compartment : root Identifier : D-Fructose_6-phosphate Trivial Name : D-Fructose 6-phosphate Compartment : mesophyll Identifier : D-Fructose_6-phosphate Trivial Name : D-Fructose 6-phosphate Compartment : plastid Identifier : D-Glucono-1,5-lactone_6-phosphate Trivial Name : D-Glucono-1,5-lactone 6-phosphate Kegg ID : C01236 Compartment : plastid Identifier : D-Glucono-1,5-lactone_6-phosphate Trivial Name : D-Glucono-1,5-lactone 6-phosphate Kegg ID : C01236 Compartment : root Identifier : D-Glucono-1,5-lactone_6-phosphate Trivial Name : D-Glucono-1,5-lactone 6-phosphate Kegg ID : C01236 Compartment : mesophyll Identifier : D-Glucose Trivial Name : D-Glucose Kegg ID : C00221 Compartment : root Identifier : D-Glucose Trivial Name : D-Glucose Kegg ID : C00221 Compartment : mesophyll Identifier : D-Glucose_1-phosphate Trivial Name : D-Glucose 1-phosphate Kegg ID : C11450 Compartment : plastid Identifier : D-Glucose_1-phosphate Trivial Name : D-Glucose 1-phosphate Kegg ID : C11450 Compartment : mesophyll Identifier : D-Glucose_1-phosphate Trivial Name : D-Glucose 1-phosphate Kegg ID : C11450 Compartment : root Identifier : D-Glucose_6-phosphate Trivial Name : D-Glucose 6-phosphate Kegg ID : C01172 Compartment : mesophyll Identifier : D-Glucose_6-phosphate Trivial Name : D-Glucose 6-phosphate Kegg ID : C01172 Compartment : plastid Identifier : D-Glucose_6-phosphate Trivial Name : D-Glucose 6-phosphate Kegg ID : C01172 Compartment : root Identifier : D-Glyceraldehyde_3-phosphate Trivial Name : D-Glyceraldehyde 3-phosphate, GAP Kegg ID : C00118 Compartment : root Identifier : D-Glyceraldehyde_3-phosphate Trivial Name : D-Glyceraldehyde 3-phosphate, GAP Kegg ID : C00118 Compartment : plastid Identifier : D-Glyceraldehyde_3-phosphate Trivial Name : D-Glyceraldehyde 3-phosphate, GAP Kegg ID : C00118 Compartment : mesophyll Identifier : D-Glyceraldehyde_3-phosphate_tmp Trivial Name : D-Glyceraldehyde 3-phosphate, GAP Kegg ID : C00118 Compartment : plant Identifier : D-Glycerate Trivial Name : (D)-Glycerate, D-glyceric acid Kegg ID : C00258 Compartment : plastid Identifier : D-Glycerate Trivial Name : (D)-Glycerate, D-glyceric acid Kegg ID : C00258 Compartment : plant Identifier : D-Glycerate Trivial Name : (D)-Glycerate, D-glyceric acid Kegg ID : C00258 Compartment : mesophyll Identifier : D-Glycerate_2-phosphate Trivial Name : D-Glycerate 2-phosphate Kegg ID : C00631 Compartment : root Identifier : D-Glycerate_2-phosphate Trivial Name : D-Glycerate 2-phosphate Kegg ID : C00631 Compartment : mesophyll Identifier : D-Glycerate_3-phosphate Trivial Name : D-Glycerate 3-phosphate, 3-phospho-D-glycerate, 3-phosphoglyceric acid, 3PGA Kegg ID : C00197 Compartment : mesophyll Identifier : D-Glycerate_3-phosphate Trivial Name : D-Glycerate 3-phosphate, 3-phospho-D-glycerate, 3-phosphoglyceric acid, 3PGA Kegg ID : C00197 Compartment : root Identifier : D-Glycerate_3-phosphate Trivial Name : D-Glycerate 3-phosphate, 3-phospho-D-glycerate, 3-phosphoglyceric acid, 3PGA Kegg ID : C00197 Compartment : plastid Identifier : D-Ribose_5-phosphate Trivial Name : D-ribose 5-phosphate Kegg ID : C00117 Compartment : mesophyll Identifier : D-Ribose_5-phosphate Trivial Name : D-ribose 5-phosphate Kegg ID : C00117 Compartment : plastid Identifier : D-Ribose_5-phosphate Trivial Name : D-ribose 5-phosphate Kegg ID : C00117 Compartment : root Identifier : D-Ribulose_1,5-bisphosphate Trivial Name : D-Ribulose 1,5-bisphosphate Kegg ID : C01182 Compartment : plastid Identifier : D-Ribulose_5-phosphate Trivial Name : D-ribulose 5-phosphate Kegg ID : C00199 Compartment : plastid Identifier : D-Ribulose_5-phosphate Trivial Name : D-ribulose 5-phosphate Kegg ID : C00199 Compartment : root Identifier : D-Ribulose_5-phosphate Trivial Name : D-ribulose 5-phosphate Kegg ID : C00199 Compartment : mesophyll Identifier : D-Sedoheptulose_7-phosphate Trivial Name : Sedoheptulose 7-phosphate Kegg ID : C00281 Compartment : plastid Identifier : D-Sedoheptulose_7-phosphate Trivial Name : Sedoheptulose 7-phosphate Kegg ID : C00281 Compartment : root Identifier : D-Sedoheptulose_7-phosphate Trivial Name : Sedoheptulose 7-phosphate Kegg ID : C00281 Compartment : mesophyll Identifier : D-Xylulose_5-phosphate Trivial Name : D-xylulose 5-phosphate Kegg ID : C00231 Compartment : plastid Identifier : D-Xylulose_5-phosphate Trivial Name : D-xylulose 5-phosphate Kegg ID : C00231 Compartment : root Identifier : D-Xylulose_5-phosphate Trivial Name : D-xylulose 5-phosphate Kegg ID : C00231 Compartment : mesophyll Identifier : Fd_ox Compartment : plastid Identifier : Fd_red Compartment : plastid Identifier : Fumarate Trivial Name : fumarate Kegg ID : C00122 Compartment : Mitochondria_root Identifier : Fumarate Trivial Name : fumarate Kegg ID : C00122 Compartment : Mitochondria_mesophyll Identifier : Fumarate Trivial Name : fumarate Kegg ID : C00122 Compartment : root Identifier : Fumarate Trivial Name : fumarate Kegg ID : C00122 Compartment : phloem Identifier : Fumarate Trivial Name : fumarate Kegg ID : C00122 Compartment : mesophyll Identifier : Fumarate_tmp Trivial Name : fumarate Kegg ID : C00122 Compartment : plant Identifier : Fumarate_tmp2 Trivial Name : fumarate Kegg ID : C00122 Compartment : plant Identifier : GMP Trivial Name : Guanosine 5'-monophosphate Kegg ID : C00144 Compartment : mesophyll Identifier : GMP Trivial Name : Guanosine 5'-monophosphate Kegg ID : C00144 Compartment : root Identifier : Glycerol Trivial Name : glycerol Kegg ID : C00116 Compartment : root Identifier : Glycerol Trivial Name : glycerol Kegg ID : C00116 Compartment : mesophyll Identifier : Glycerone-phosphate Trivial Name : glycerone phosphate, dihydroxyacetone phosphate, DHAP Kegg ID : C00111 Compartment : root Identifier : Glycerone-phosphate Trivial Name : glycerone phosphate, dihydroxyacetone phosphate, DHAP Kegg ID : C00111 Compartment : mesophyll Identifier : Glycerone-phosphate Trivial Name : glycerone phosphate, dihydroxyacetone phosphate, DHAP Kegg ID : C00111 Compartment : plastid Identifier : Glycine Trivial Name : glycine Kegg ID : C00037 Compartment : mesophyll Identifier : Glycine Trivial Name : glycine Kegg ID : C00037 Compartment : root Identifier : Glycolate Trivial Name : Glycolate Kegg ID : C00160 Compartment : mesophyll Identifier : Glycolate Trivial Name : Glycolate Kegg ID : C00160 Compartment : plastid Identifier : Glycolate Trivial Name : Glycolate Kegg ID : C00160 Compartment : plant Identifier : Glyoxylate Trivial Name : Glyoxylate Kegg ID : C00048 Compartment : mesophyll Identifier : H2O Trivial Name : water Kegg ID : C00001 Compartment : plant Identifier : H2O Trivial Name : water Kegg ID : C00001 Compartment : mesophyll Identifier : H2O Trivial Name : water Kegg ID : C00001 Compartment : root Identifier : H2O Trivial Name : water Kegg ID : C00001 Compartment : phloem Identifier : H2O Trivial Name : water Kegg ID : C00001 Compartment : Mitochondria_mesophyll Identifier : H2O Trivial Name : water Kegg ID : C00001 Compartment : Mitochondria_root Identifier : H2O Trivial Name : water Kegg ID : C00001 Compartment : plastid Identifier : H2O Trivial Name : water Kegg ID : C00001 Compartment : external Identifier : H2O2 Trivial Name : hydrogen peroxide Kegg ID : C00027 Compartment : mesophyll Identifier : H2O_tmp Trivial Name : water_tmp Kegg ID : C00001 Compartment : plant Identifier : H2O_tmp2 Trivial Name : water_tmp Kegg ID : C00001 Compartment : plant Identifier : H2O_tmp3 Trivial Name : water_tmp Kegg ID : C00001 Compartment : plant Identifier : H2O_tmp4 Compartment : plant Identifier : H2O_tmp5 Compartment : plant Identifier : H2O_tmp6 Compartment : plant Identifier : H2S Trivial Name : Hydrogen sulfide Kegg ID : C00283 Compartment : root Identifier : H2S Trivial Name : Hydrogen sulfide Kegg ID : C00283 Compartment : mesophyll Identifier : H2S Trivial Name : Hydrogen sulfide Kegg ID : C00283 Compartment : plastid Identifier : H2S_tmp Trivial Name : Hydrogen sulfide Kegg ID : C00283 Compartment : plant Identifier : H_in Trivial Name : intermembrane proton, involved in respiration Kegg ID : C00080 Compartment : phloem Identifier : H_in_tmp Trivial Name : intermembrane proton, involved in respiration Kegg ID : C00080 Compartment : plant Identifier : H_in_tmp2 Trivial Name : intermembrane proton, involved in respiration Kegg ID : C00080 Compartment : plant Identifier : H_in_tmp3 Trivial Name : intermembrane proton, involved in respiration Kegg ID : C00080 Compartment : plant Identifier : Hexadecanoate Trivial Name : Hexadecanoate / Palmitate Kegg ID : C00249 Compartment : mesophyll Identifier : Hexadecanoate Trivial Name : Hexadecanoate / Palmitate Kegg ID : C00249 Compartment : root Identifier : IMP Trivial Name : Inosine 5'-monophosphate Kegg ID : C00130 Compartment : mesophyll Identifier : IMP Trivial Name : Inosine 5'-monophosphate Kegg ID : C00130 Compartment : root Identifier : Isocitrate Trivial Name : isocitrate Kegg ID : C00311 Compartment : mesophyll Identifier : Isocitrate Trivial Name : isocitrate Kegg ID : C00311 Compartment : root Identifier : Isocitrate Trivial Name : isocitrate Kegg ID : C00311 Compartment : Mitochondria_mesophyll Identifier : Isocitrate Trivial Name : isocitrate Kegg ID : C00311 Compartment : Mitochondria_root Identifier : Isocitrate_tmp Trivial Name : isocitrate Kegg ID : C00311 Compartment : plant Identifier : Isocitrate_tmp2 Trivial Name : isocitrate Kegg ID : C00311 Compartment : plant Identifier : L-Alanine Trivial Name : L-alanine Kegg ID : C00041 Compartment : mesophyll Identifier : L-Alanine Trivial Name : L-alanine Kegg ID : C00041 Compartment : root Identifier : L-Arginine Trivial Name : L-arginine Kegg ID : C00062 Compartment : root Identifier : L-Arginine Trivial Name : L-arginine Kegg ID : C00062 Compartment : mesophyll Identifier : L-Asparagine Trivial Name : L-asparagine Kegg ID : C00152 Compartment : root Identifier : L-Asparagine Trivial Name : L-asparagine Kegg ID : C00152 Compartment : mesophyll Identifier : L-Aspartate Trivial Name : L-aspartate Kegg ID : C00049 Compartment : root Identifier : L-Aspartate Trivial Name : L-aspartate Kegg ID : C00049 Compartment : mesophyll Identifier : L-Cysteine Trivial Name : L-cysteine Kegg ID : C00097 Compartment : mesophyll Identifier : L-Cysteine Trivial Name : L-cysteine Kegg ID : C00097 Compartment : root Identifier : L-Glutamate Trivial Name : L-glutamate, glutamic acid, Glu Kegg ID : C00025 Compartment : mesophyll Identifier : L-Glutamate Trivial Name : L-glutamate, glutamic acid, Glu Kegg ID : C00025 Compartment : root Identifier : L-Glutamate Trivial Name : L-glutamate, glutamic acid, Glu Kegg ID : C00025 Compartment : plastid Identifier : L-Glutamate_tmp Trivial Name : L-glutamate, glutamic acid, Glu Kegg ID : C00025 Compartment : plant Identifier : L-Glutamine Trivial Name : L-glutamine, Gln Kegg ID : C00064 Compartment : mesophyll Identifier : L-Glutamine Trivial Name : L-glutamine, Gln Kegg ID : C00064 Compartment : root Identifier : L-Glutamine Trivial Name : L-glutamine, Gln Kegg ID : C00064 Compartment : plastid Identifier : L-Glutamine_tmp Trivial Name : L-glutamine, Gln Kegg ID : C00064 Compartment : plant Identifier : L-Histidine Trivial Name : L-histidine Kegg ID : C00135 Compartment : root Identifier : L-Histidine Trivial Name : L-histidine Kegg ID : C00135 Compartment : mesophyll Identifier : L-Homoserine Trivial Name : L-homoserine Kegg ID : C00263 Compartment : mesophyll Identifier : L-Homoserine Trivial Name : L-homoserine Kegg ID : C00263 Compartment : root Identifier : L-Isoleucine Trivial Name : L-isoleucine Kegg ID : C00407 Compartment : mesophyll Identifier : L-Isoleucine Trivial Name : L-isoleucine Kegg ID : C00407 Compartment : root Identifier : L-Leucine Trivial Name : L-leucine Kegg ID : C00123 Compartment : mesophyll Identifier : L-Leucine Trivial Name : L-leucine Kegg ID : C00123 Compartment : root Identifier : L-Lysine Trivial Name : L-lysine Kegg ID : C00047 Compartment : mesophyll Identifier : L-Lysine Trivial Name : L-lysine Kegg ID : C00047 Compartment : root Identifier : L-Malate Trivial Name : L-malate = (S)-Malate Kegg ID : C00149 Compartment : mesophyll Identifier : L-Malate Trivial Name : L-malate = (S)-Malate Kegg ID : C00149 Compartment : root Identifier : L-Malate Trivial Name : L-malate = (S)-Malate Kegg ID : C00149 Compartment : plastid Identifier : L-Malate Trivial Name : L-malate = (S)-Malate Kegg ID : C00149 Compartment : Mitochondria_mesophyll Identifier : L-Malate Trivial Name : L-malate = (S)-Malate Kegg ID : C00149 Compartment : Mitochondria_root Identifier : L-Malate_tmp Trivial Name : L-malate = (S)-Malate Kegg ID : C00149 Compartment : plant Identifier : L-Malate_tmp2 Trivial Name : L-malate = (S)-Malate Kegg ID : C00149 Compartment : plant Identifier : L-Malate_tmp3 Trivial Name : L-malate = (S)-Malate Kegg ID : C00149 Compartment : plant Identifier : L-Methionine Trivial Name : L-methionine Kegg ID : C00073 Compartment : mesophyll Identifier : L-Methionine Trivial Name : L-methionine Kegg ID : C00073 Compartment : root Identifier : L-Ornithine Trivial Name : L-ornithine Kegg ID : C00077 Compartment : root Identifier : L-Ornithine Trivial Name : L-ornithine Kegg ID : C00077 Compartment : mesophyll Identifier : L-Phenylalanine Trivial Name : L-phenylalanine Kegg ID : C00079 Compartment : mesophyll Identifier : L-Phenylalanine Trivial Name : L-phenylalanine Kegg ID : C00079 Compartment : root Identifier : L-Proline Trivial Name : L-proline Kegg ID : C00148 Compartment : mesophyll Identifier : L-Proline Trivial Name : L-proline Kegg ID : C00148 Compartment : root Identifier : L-Serine Trivial Name : L-serine Kegg ID : C00065 Compartment : mesophyll Identifier : L-Serine Trivial Name : L-serine Kegg ID : C00065 Compartment : root Identifier : L-Threonine Trivial Name : L-threonine Kegg ID : C00188 Compartment : mesophyll Identifier : L-Threonine Trivial Name : L-threonine Kegg ID : C00188 Compartment : root Identifier : L-Tryptophan Trivial Name : L-tryptophan Kegg ID : C00078 Compartment : mesophyll Identifier : L-Tryptophan Trivial Name : L-tryptophan Kegg ID : C00078 Compartment : root Identifier : L-Tyrosine Trivial Name : L-tyrosine Kegg ID : C00082 Compartment : mesophyll Identifier : L-Tyrosine Trivial Name : L-tyrosine Kegg ID : C00082 Compartment : root Identifier : L-Valine Trivial Name : L-valine Kegg ID : C00183 Compartment : mesophyll Identifier : L-Valine Trivial Name : L-valine Kegg ID : C00183 Compartment : root Identifier : Linoleate Trivial Name : Linoleate Kegg ID : C01595 Compartment : mesophyll Identifier : Linoleate Trivial Name : Linoleate Kegg ID : C01595 Compartment : root Identifier : Lipid Compartment : mesophyll Identifier : Lipid Compartment : root Identifier : NAD Trivial Name : NAD Kegg ID : C00003 Compartment : Mitochondria_mesophyll Identifier : NAD Trivial Name : NAD Kegg ID : C00003 Compartment : Mitochondria_root Identifier : NAD Trivial Name : NAD Kegg ID : C00003 Compartment : phloem Identifier : NAD Trivial Name : NAD Kegg ID : C00003 Compartment : mesophyll Identifier : NAD Trivial Name : NAD Kegg ID : C00003 Compartment : root Identifier : NADH Trivial Name : NADH Kegg ID : C00004 Compartment : Mitochondria_mesophyll Identifier : NADH Trivial Name : NADH Kegg ID : C00004 Compartment : Mitochondria_root Identifier : NADH Trivial Name : NADH Kegg ID : C00004 Compartment : phloem Identifier : NADH Trivial Name : NADH Kegg ID : C00004 Compartment : mesophyll Identifier : NADH Trivial Name : NADH Kegg ID : C00004 Compartment : root Identifier : NADP Trivial Name : NADP Kegg ID : C00006 Compartment : plastid Identifier : NADP Trivial Name : NADP Kegg ID : C00006 Compartment : mesophyll Identifier : NADP Trivial Name : NADP Kegg ID : C00006 Compartment : root Identifier : NADPH Trivial Name : NADPH Kegg ID : C00005 Compartment : plastid Identifier : NADPH Trivial Name : NADPH Kegg ID : C00005 Compartment : mesophyll Identifier : NADPH Trivial Name : NADPH Kegg ID : C00005 Compartment : root Identifier : NH4 Trivial Name : ammonia Kegg ID : C00014 Compartment : plant Identifier : NH4 Trivial Name : ammonia Kegg ID : C00014 Compartment : mesophyll Identifier : NH4 Trivial Name : ammonia Kegg ID : C00014 Compartment : root Identifier : NH4 Trivial Name : ammonia Kegg ID : C00014 Compartment : plastid Identifier : Nitrate Trivial Name : nitrate Kegg ID : C00244 Compartment : external Identifier : Nitrate Trivial Name : nitrate Kegg ID : C00244 Compartment : plant Identifier : Nitrate Trivial Name : nitrate Kegg ID : C00244 Compartment : mesophyll Identifier : Nitrate Trivial Name : nitrate Kegg ID : C00244 Compartment : root Identifier : Nitrate Trivial Name : nitrate Kegg ID : C00244 Compartment : phloem Identifier : Nitrate_tmp2 Compartment : plant Identifier : Nitrate_tmp3 Compartment : plant Identifier : Nitrite Trivial Name : nitrite Kegg ID : C00088 Compartment : mesophyll Identifier : Nitrite Trivial Name : nitrite Kegg ID : C00088 Compartment : root Identifier : Nitrite Trivial Name : nitrite Kegg ID : C00088 Compartment : plastid Identifier : Nitrite_tmp Trivial Name : nitrite Kegg ID : C00088 Compartment : plant Identifier : Nitrogen_inorg Trivial Name : inorganic nitrogen in content of HNO3 Compartment : mesophyll Identifier : Nitrogen_inorg Trivial Name : inorganic nitrogen in content of HNO3 Compartment : root Identifier : O2 Trivial Name : oxygen Kegg ID : C00007 Compartment : root Identifier : O2 Trivial Name : oxygen Kegg ID : C00007 Compartment : phloem Identifier : O2 Trivial Name : oxygen Kegg ID : C00007 Compartment : external Identifier : O2 Trivial Name : oxygen Kegg ID : C00007 Compartment : plant Identifier : O2 Trivial Name : oxygen Kegg ID : C00007 Compartment : plastid Identifier : O2 Trivial Name : oxygen Kegg ID : C00007 Compartment : mesophyll Identifier : O2_Mitochondria Trivial Name : oxygen Kegg ID : C00007 Compartment : mesophyll Identifier : O2_Mitochondria Trivial Name : oxygen Kegg ID : C00007 Compartment : root Identifier : O2_tmp Trivial Name : oxygen Kegg ID : C00007 Compartment : plant Identifier : O2_tmp2 Trivial Name : oxygen Kegg ID : C00007 Compartment : plant Identifier : O2_tmp3 Trivial Name : oxygen Kegg ID : C00007 Compartment : plant Identifier : OH Trivial Name : hydroxide ion Kegg ID : C01328 Compartment : root Identifier : OH Trivial Name : hydroxide ion Kegg ID : C01328 Compartment : mesophyll Identifier : OH Trivial Name : hydroxide ion Kegg ID : C01328 Compartment : phloem Identifier : OH Trivial Name : hydroxide ion Kegg ID : C01328 Compartment : Mitochondria_root Identifier : Octadecanoate Trivial Name : Octadecanoate / Stearate Kegg ID : C01530 Compartment : root Identifier : Octadecanoate Trivial Name : Octadecanoate / Stearate Kegg ID : C01530 Compartment : mesophyll Identifier : Orthophosphate Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : mesophyll Identifier : Orthophosphate Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : root Identifier : Orthophosphate Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : plastid Identifier : Orthophosphate Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : phloem Identifier : Orthophosphate Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : Mitochondria_mesophyll Identifier : Orthophosphate Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : Mitochondria_root Identifier : Orthophosphate Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : external Identifier : Orthophosphate Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : plant Identifier : Orthophosphate_tmp Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : plant Identifier : Orthophosphate_tmp2 Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : plant Identifier : Orthophosphate_tmp3 Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : plant Identifier : Orthophosphate_tmp4 Trivial Name : Orthophosphate Kegg ID : C00009 Compartment : plant Identifier : Orthophosphate_tmp5 Compartment : plant Identifier : Oxaloacetate Trivial Name : oxaloacetate Kegg ID : C00036 Compartment : plastid Identifier : Oxaloacetate Trivial Name : oxaloacetate Kegg ID : C00036 Compartment : mesophyll Identifier : Oxaloacetate Trivial Name : oxaloacetate Kegg ID : C00036 Compartment : root Identifier : Oxaloacetate Trivial Name : oxaloacetate Kegg ID : C00036 Compartment : Mitochondria_mesophyll Identifier : Oxaloacetate Trivial Name : oxaloacetate Kegg ID : C00036 Compartment : Mitochondria_root Identifier : Oxaloacetate_tmp Trivial Name : oxaloacetate Kegg ID : C00036 Compartment : plant Identifier : Oxaloacetate_tmp2 Trivial Name : oxaloacetate Kegg ID : C00036 Compartment : plant Identifier : Oxaloacetate_tmp3 Trivial Name : oxaloacetate Kegg ID : C00036 Compartment : plant Identifier : PC_ox Compartment : plastid Identifier : PC_red Compartment : plastid Identifier : PRPP Trivial Name : 5-phospho-'alpha'-D-ribose 1-diphosphate Kegg ID : C00119 Compartment : mesophyll Identifier : PRPP Trivial Name : 5-phospho-'alpha'-D-ribose 1-diphosphate Kegg ID : C00119 Compartment : root Identifier : Phosphoenolpyruvate Trivial Name : Phosphoenolpyruvate Kegg ID : C00074 Compartment : mesophyll Identifier : Phosphoenolpyruvate Trivial Name : Phosphoenolpyruvate Kegg ID : C00074 Compartment : root Identifier : Phosphoglycolate Trivial Name : 2-phosphoglycolate, 2-P-glycolate, phosphoglycolic acid Kegg ID : C00988 Compartment : plastid Identifier : Phosphorus_inorg Trivial Name : inorganic phosphorus in content of H3PO4 Compartment : mesophyll Identifier : Phosphorus_inorg Trivial Name : inorganic phosphorus in content of H3PO4 Compartment : root Identifier : Plastoquinol Trivial Name : plastoquinone Compartment : plastid Identifier : Plastoquinone Trivial Name : plastoquinone Compartment : plastid Identifier : Protein Compartment : root Identifier : Protein Compartment : mesophyll Identifier : Pyruvate Trivial Name : Pyruvate Kegg ID : C00022 Compartment : phloem Identifier : Pyruvate Trivial Name : Pyruvate Kegg ID : C00022 Compartment : Mitochondria_mesophyll Identifier : Pyruvate Trivial Name : Pyruvate Kegg ID : C00022 Compartment : Mitochondria_root Identifier : Pyruvate Trivial Name : Pyruvate Kegg ID : C00022 Compartment : mesophyll Identifier : Pyruvate Trivial Name : Pyruvate Kegg ID : C00022 Compartment : root Identifier : Pyruvate_tmp Trivial Name : Pyruvate Kegg ID : C00022 Compartment : plant Identifier : Pyruvate_tmp2 Trivial Name : Pyruvate Kegg ID : C00022 Compartment : plant Identifier : RNA Compartment : mesophyll Identifier : RNA Compartment : root Identifier : Sedoheptulose_1,7-bisphosphate Trivial Name : Sedoheptulose 1,7-bisphosphate Kegg ID : C00447 Compartment : plastid Identifier : Starch Compartment : external Identifier : Starch Compartment : plant Identifier : Starch Compartment : mesophyll Identifier : Starch Compartment : plastid Identifier : Starch_tmp Compartment : plant Identifier : Succinate Trivial Name : succinate Kegg ID : C00042 Compartment : phloem Identifier : Succinate Trivial Name : succinate Kegg ID : C00042 Compartment : Mitochondria_mesophyll Identifier : Succinate Trivial Name : succinate Kegg ID : C00042 Compartment : Mitochondria_root Identifier : Succinyl-CoA Trivial Name : succinyl-CoA Kegg ID : C00091 Compartment : Mitochondria_mesophyll Identifier : Succinyl-CoA Trivial Name : succinyl-CoA Kegg ID : C00091 Compartment : Mitochondria_root Identifier : Sucrose Trivial Name : sucrose, saccharose Systematic Name : 1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside Kegg ID : C00089 Compartment : phloem Identifier : Sucrose Trivial Name : sucrose, saccharose Systematic Name : 1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside Kegg ID : C00089 Compartment : plant Identifier : Sucrose Trivial Name : sucrose, saccharose Systematic Name : 1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside Kegg ID : C00089 Compartment : mesophyll Identifier : Sucrose Trivial Name : sucrose, saccharose Systematic Name : 1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside Kegg ID : C00089 Compartment : root Identifier : Sucrose_6-phosphate Trivial Name : sucrose-6-P Systematic Name : Sucrose 6'-phosphate Kegg ID : C02591 Compartment : mesophyll Identifier : Sucrose_tmp Compartment : plant Identifier : Sucrose_vac Trivial Name : sucrose, saccharose Systematic Name : 1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside Kegg ID : C00089 Compartment : mesophyll Identifier : Sucrose_vac Trivial Name : sucrose, saccharose Systematic Name : 1-alpha-D-Glucopyranosyl-2-beta-D-fructofuranoside Kegg ID : C00089 Compartment : root Identifier : Sulfate Trivial Name : sulphate Kegg ID : C00059 Compartment : mesophyll Identifier : Sulfate Trivial Name : sulphate Kegg ID : C00059 Compartment : plant Identifier : Sulfate Trivial Name : sulphate Kegg ID : C00059 Compartment : external Identifier : Sulfate Trivial Name : sulphate Kegg ID : C00059 Compartment : phloem Identifier : Sulfate Trivial Name : sulphate Kegg ID : C00059 Compartment : plastid Identifier : Sulfate Trivial Name : sulphate Kegg ID : C00059 Compartment : root Identifier : Sulfate_tmp Trivial Name : sulphate Kegg ID : C00059 Compartment : plant Identifier : Sulfate_tmp2 Compartment : plant Identifier : Sulfate_tmp3 Compartment : plant Identifier : Sulfite Trivial Name : sulfite Kegg ID : C00094 Compartment : plastid Identifier : Sulfur_inorg Trivial Name : inorganic sulfur in content of H2SO4 Compartment : mesophyll Identifier : Sulfur_inorg Trivial Name : inorganic sulfur in content of H2SO4 Compartment : root Identifier : Tetrahydrofolate Trivial Name : 5,6,7,8-tetrahydrofolate / THF Kegg ID : C00101 Compartment : mesophyll Identifier : Tetrahydrofolate Trivial Name : 5,6,7,8-tetrahydrofolate / THF Kegg ID : C00101 Compartment : root Identifier : UDP Trivial Name : uridine 5'-diphosphate Kegg ID : C00015 Compartment : mesophyll Identifier : UDP Trivial Name : uridine 5'-diphosphate Kegg ID : C00015 Compartment : root Identifier : UDP-Glucose Trivial Name : UDP-glucose Kegg ID : C00029 Compartment : mesophyll Identifier : UDP-Glucose Trivial Name : UDP-glucose Kegg ID : C00029 Compartment : root Identifier : UDP-Glucuronate Trivial Name : UDP-alfa-D-glucuronate Kegg ID : C00167 Compartment : mesophyll Identifier : UDP-Glucuronate Trivial Name : UDP-alfa-D-glucuronate Kegg ID : C00167 Compartment : root Identifier : UMP Trivial Name : Uridine 5'-monophosphate Kegg ID : C00105 Compartment : mesophyll Identifier : UMP Trivial Name : Uridine 5'-monophosphate Kegg ID : C00105 Compartment : root Identifier : UTP Trivial Name : uridine 5'-triphosphate Kegg ID : C00075 Compartment : mesophyll Identifier : UTP Trivial Name : uridine 5'-triphosphate Kegg ID : C00075 Compartment : root Identifier : alpha-Maltose Trivial Name : alpha-Maltose Kegg ID : C00897 Compartment : mesophyll Identifier : alpha-Maltose Trivial Name : alpha-Maltose Kegg ID : C00897 Compartment : plastid Identifier : alpha-Maltose_tmp Trivial Name : alpha-Maltose Kegg ID : C00897 Compartment : plant Identifier : ash Compartment : mesophyll Identifier : ash Compartment : root Identifier : beta-D-Fructofuranose Kegg ID : C00089 Compartment : root Identifier : cis-Hexadecenoate Trivial Name : Hexadecenoate / Palmitate Kegg ID : C00249 Compartment : mesophyll Identifier : cis-Hexadecenoate Trivial Name : Hexadecenoate / Palmitate Kegg ID : C00249 Compartment : root Identifier : cis-Octadecenoate Trivial Name : cis-Octadecenoate Compartment : mesophyll Identifier : cis-Octadecenoate Trivial Name : cis-Octadecenoate Compartment : root Identifier : h Trivial Name : proton Kegg ID : C00080 Compartment : external Identifier : h Trivial Name : proton Kegg ID : C00080 Compartment : mesophyll Identifier : h Trivial Name : proton Kegg ID : C00080 Compartment : root Identifier : h Trivial Name : proton Kegg ID : C00080 Compartment : phloem Identifier : h Trivial Name : proton Kegg ID : C00080 Compartment : plastid Identifier : h Trivial Name : proton Kegg ID : C00080 Compartment : Mitochondria_mesophyll Identifier : h Trivial Name : proton Kegg ID : C00080 Compartment : Mitochondria_root Identifier : h_tmp Trivial Name : proton Kegg ID : C00080 Compartment : plant Identifier : h_tmp2 Trivial Name : proton Kegg ID : C00080 Compartment : plant Identifier : h_tmp3 Trivial Name : proton Kegg ID : C00080 Compartment : plant Identifier : h_tmp4 Compartment : plant Identifier : h_tmp5 Compartment : plant Identifier : h_tmp6 Compartment : plant Identifier : hv Trivial Name : photon, quantum of light Kegg ID : C00205 Compartment : external Identifier : hv Trivial Name : photon, quantum of light Kegg ID : C00205 Compartment : plant Identifier : pectin Compartment : mesophyll Identifier : pectin Compartment : root Identifier : sn-Glycerol_3-phosphate Trivial Name : sn-Glycerol 3-phosphate Kegg ID : C00093 Compartment : mesophyll Identifier : sn-Glycerol_3-phosphate Trivial Name : sn-Glycerol 3-phosphate Kegg ID : C00093 Compartment : root -------------------- ENZYMES & GENES -------------------- Source ID : AT1G62660.1 Gene name : AT1G62660.1 Source : AraCyc KEGG ID : AT1G62660 Transformer : FF / FF_root Source ID : AT1G09960.1 Gene name : AT1G09960.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT4G38880.1 Gene name : AT4G38880.1 Source : AraCyc KEGG ID : AT4G38880 Transformer : AICAR / AICAR_root Source ID : AT3G04790.1 Gene name : AT3G04790.1 Source : AraCyc KEGG ID : AT3G04790 Transformer : R5PI / R5PI_root Source ID : AT3G03630.1 Gene name : AT3G03630.1 Source : AraCyc KEGG ID : AT3G03630 Transformer : CYS / CYS_root Source ID : AT3G53180.1 Gene name : AT3G53180.1 Source : AraCyc KEGG ID : AT3G53180 Transformer : GLN / GLN_plastid / GLN_root Source ID : AT1G29900.1 Gene name : AT1G29900.1 Source : AraCyc KEGG ID : AT1G29900 Transformer : UMP / UMP_root Source ID : AT3G23640.2 Gene name : AT3G23640.2 Source : AraCyc KEGG ID : AT3G23640 Transformer : MH Source ID : AT3G23640.1 Gene name : AT3G23640.1 Source : AraCyc KEGG ID : AT3G23640 Transformer : MH Source ID : AT2G31810.3 Gene name : AT2G31810.3 Source : AraCyc KEGG ID : AT2G31810 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT2G31810.2 Gene name : AT2G31810.2 Source : AraCyc KEGG ID : AT2G31810 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT3G26650.1 Gene name : AT3G26650.1 Source : AraCyc KEGG ID : AT3G26650 Transformer : GAPDH / GAPDH_root / GAPDH_plastid / PRK_plastid Source ID : AT2G34890.1 Gene name : AT2G34890.1 Source : AraCyc KEGG ID : AT2G34890 Transformer : AT2G34890.1 Source ID : AT4G29840.1 Gene name : AT4G29840.1 Source : AraCyc KEGG ID : AT4G29840 Transformer : Thr / Thr_root Source ID : AT2G31810.1 Gene name : AT2G31810.1 Source : AraCyc KEGG ID : AT2G31810 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT5G51820.1 Gene name : AT5G51820.1 Source : AraCyc KEGG ID : AT5G51820 Transformer : PGM3 / PGM3_root / PGM_plastid Source ID : AT5G47840.1 Gene name : AT5G47840.1 Source : AraCyc KEGG ID : AT5G47840 Transformer : AT5G47840.1 Source ID : AT4G19710.2 Gene name : AT4G19710.2 Source : AraCyc KEGG ID : AT4G19710 Transformer : Hom / Hom_root Source ID : AT4G19180.1 Gene name : AT4G19180.1 Source : AraCyc KEGG ID : AT4G19180 Transformer : UDP / UDP_root / UTP / UTP_root / CMP / CMP_root Source ID : AT4G19710.1 Gene name : AT4G19710.1 Source : AraCyc KEGG ID : AT4G19710 Transformer : Hom / Hom_root Source ID : AT4G25010.1 Gene name : AT4G25010.1 Source : AraCyc Transformer : T.Sucrose.mesophyll Source ID : AT1G80560.1 Gene name : AT1G80560.1 Source : AraCyc KEGG ID : AT1G80560 Transformer : Leu / Leu_root Source ID : AT5G60340.1 Gene name : AT5G60340.1 Source : AraCyc KEGG ID : AT5G60340 Transformer : AT5G60340.1 Source ID : AT4G39120.1 Gene name : AT4G39120.1 Source : AraCyc KEGG ID : AT4G39120 Transformer : His Source ID : AT2G22780.1 Gene name : AT2G22780.1 Source : AraCyc KEGG ID : AT2G22780 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT5G17310.2 Gene name : AT5G17310.2 Source : AraCyc KEGG ID : AT5G17310 Transformer : UGP / UGP_root Source ID : AT5G17310.1 Gene name : AT5G17310.1 Source : AraCyc KEGG ID : AT5G17310 Transformer : UGP / UGP_root Source ID : AT3G25900.3 Gene name : AT3G25900.3 Source : AraCyc KEGG ID : AT3G25900 Transformer : MET / MET_root Source ID : AT3G25900.2 Gene name : AT3G25900.2 Source : AraCyc KEGG ID : AT3G25900 Transformer : MET / MET_root Source ID : AT2G17640.1 Gene name : AT2G17640.1 Source : AraCyc KEGG ID : AT2G17640 Transformer : CYS / CYS_root Source ID : AT1G48030.2 Gene name : AT1G48030.2 Source : AraCyc KEGG ID : AT1G48030 Transformer : PDH / PDH_root / Suc-CoA / Suc-CoA_root / AT Source ID : AT3G25900.1 Gene name : AT3G25900.1 Source : AraCyc KEGG ID : AT3G25900 Transformer : MET / MET_root Source ID : AT1G48030.1 Gene name : AT1G48030.1 Source : AraCyc KEGG ID : AT1G48030 Transformer : PDH / PDH_root / Suc-CoA / Suc-CoA_root / AT Source ID : AT5G63890.2 Gene name : AT5G63890.2 Source : AraCyc KEGG ID : AT5G63890 Transformer : HISN8 Source ID : AT5G38410.3 Gene name : AT5G38410.3 Source : AraCyc KEGG ID : AT5G38410 Transformer : RPC_plastid / RPC2_plastide Source ID : AT5G63890.1 Gene name : AT5G63890.1 Source : AraCyc KEGG ID : AT5G63890 Transformer : His / His_root Source ID : AT1G31180.1 Gene name : AT1G31180.1 Source : AraCyc KEGG ID : AT1G31180 Transformer : Leu / Leu_root Source ID : AT5G38410.2 Gene name : AT5G38410.2 Source : AraCyc KEGG ID : AT5G38410 Transformer : RPC_plastid / RPC2_plastide Source ID : AT5G38410.1 Gene name : AT5G38410.1 Source : AraCyc KEGG ID : AT5G38410 Transformer : RPC_plastid / RPC2_plastide Source ID : AT5G08670.1 Gene name : AT5G08670.1 Source : AraCyc KEGG ID : AT5G08670 Transformer : ATP synthase Source ID : AT1G07930.2 Gene name : AT1G07930.2 Source : AraCyc KEGG ID : GQT-46 Transformer : CYS / CYS_root Source ID : AT1G07930.1 Gene name : AT1G07930.1 Source : AraCyc KEGG ID : GQT-46 Transformer : CYS / CYS_root Source ID : AT5G50950.3 Gene name : AT5G50950.3 Source : AraCyc KEGG ID : AT5G50950 Transformer : FUM / FUM_root Source ID : AT1G08630.5 Gene name : AT1G08630.5 Source : AraCyc KEGG ID : AT1G08630 Transformer : GHMT / GHMT_root Source ID : AT5G50950.2 Gene name : AT5G50950.2 Source : AraCyc KEGG ID : AT5G50950 Transformer : FUM / FUM_root Source ID : AT5G23020.1 Gene name : AT5G23020.1 Source : AraCyc KEGG ID : AT5G23020 Transformer : Leu / Leu_root Source ID : AT1G08630.4 Gene name : AT1G08630.4 Source : AraCyc KEGG ID : AT1G08630 Transformer : GHMT / GHMT_root Source ID : AT5G50950.1 Gene name : AT5G50950.1 Source : AraCyc KEGG ID : AT5G50950 Transformer : FUM / FUM_root Source ID : AT3G09810.1 Gene name : AT3G09810.1 Source : AraCyc KEGG ID : AT3G09810 Transformer : IDH / IDH_root / IDH_mitochondria / IDH_mitochondria_root Source ID : AT1G54340.1 Gene name : AT1G54340.1 Source : AraCyc KEGG ID : AT1G54340 Transformer : IDH Source ID : AT1G08630.3 Gene name : AT1G08630.3 Source : AraCyc KEGG ID : AT1G08630 Transformer : GHMT / GHMT_root Source ID : AT1G13700.1 Gene name : AT1G13700.1 Source : AraCyc KEGG ID : AT1G13700 Transformer : PGL / PGL_root Source ID : AT1G08630.2 Gene name : AT1G08630.2 Source : AraCyc KEGG ID : AT1G08630 Transformer : GHMT / GHMT_root Source ID : AT1G08630.1 Gene name : AT1G08630.1 Source : AraCyc KEGG ID : AT1G08630 Transformer : GHMT / GHMT_root Source ID : AT1G67090.2 Gene name : AT1G67090.2 Source : AraCyc KEGG ID : AT1G67090 Transformer : RPC_plastid / RPC2_plastide Source ID : AT1G67090.1 Gene name : AT1G67090.1 Source : AraCyc KEGG ID : AT1G67090 Transformer : RPC_plastid / RPC2_plastide Source ID : AT3G27300.3 Gene name : AT3G27300.3 Source : AraCyc KEGG ID : AT3G27300 Transformer : G6PDH / G6PDH_root Source ID : AT3G27300.2 Gene name : AT3G27300.2 Source : AraCyc KEGG ID : AT3G27300 Transformer : G6PDH / G6PDH_root Source ID : AT5G20280.1 Gene name : AT5G20280.1 Source : AraCyc KEGG ID : AT5G20280 Transformer : SPS Source ID : AT3G27300.1 Gene name : AT3G27300.1 Source : AraCyc KEGG ID : AT3G27300 Transformer : G6PDH / G6PDH_root Source ID : AT5G26570.2 Gene name : AT5G26570.2 Source : AraCyc KEGG ID : AT5G26570 Transformer : BAM Source ID : AT5G26570.1 Gene name : AT5G26570.1 Source : AraCyc KEGG ID : AT5G26570 Transformer : BAM Source ID : AT5G63840.1 Gene name : AT5G63840.1 Source : AraCyc KEGG ID : AT5G63840 Transformer : MH Source ID : AT5G06170.1 Gene name : AT5G06170.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT3G23940.2 Gene name : AT3G23940.2 Source : AraCyc KEGG ID : AT3G23940 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT1G48850.3 Gene name : AT1G48850.3 Source : AraCyc KEGG ID : AT1G48850 Transformer : Chor / Chor_root Source ID : AT3G20330.1 Gene name : AT3G20330.1 Source : AraCyc KEGG ID : AT3G20330 Transformer : UMP / UMP_root Source ID : AT3G23940.1 Gene name : AT3G23940.1 Source : AraCyc KEGG ID : AT3G23940 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT1G48850.2 Gene name : AT1G48850.2 Source : AraCyc KEGG ID : AT1G48850 Transformer : Chor / Chor_root Source ID : AT4G17090.1 Gene name : AT4G17090.1 Source : AraCyc KEGG ID : AT4G17090 Transformer : BAM Source ID : AT1G48850.1 Gene name : AT1G48850.1 Source : AraCyc KEGG ID : AT1G48850 Transformer : Chor / Chor_root Source ID : AT1G63660.2 Gene name : AT1G63660.2 Source : AraCyc KEGG ID : AT1G63660 Transformer : GMP / GMP_root Source ID : AT3G58610.3 Gene name : AT3G58610.3 Source : AraCyc KEGG ID : AT3G58610 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT1G63660.1 Gene name : AT1G63660.1 Source : AraCyc KEGG ID : AT1G63660 Transformer : GMP / GMP_root Source ID : AT3G58610.2 Gene name : AT3G58610.2 Source : AraCyc KEGG ID : AT3G58610 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT4G26530.2 Gene name : AT4G26530.2 Source : AraCyc KEGG ID : AT4G26530 Transformer : Aldo / Aldo_root / Aldo_plastid Source ID : AT3G58610.1 Gene name : AT3G58610.1 Source : AraCyc KEGG ID : AT3G58610 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT4G26530.1 Gene name : AT4G26530.1 Source : AraCyc KEGG ID : AT4G26530 Transformer : Aldo / Aldo_root / Aldo_plastid Source ID : AT5G28030.2 Gene name : AT5G28030.2 Source : AraCyc KEGG ID : GQT-2743 Transformer : CYS / CYS_root Source ID : AT5G28030.1 Gene name : AT5G28030.1 Source : AraCyc KEGG ID : GQT-2743 Transformer : CYS / CYS_root Source ID : AT4G14880.4 Gene name : AT4G14880.4 Source : AraCyc KEGG ID : AT4G14880 Transformer : CYS / CYS_root Source ID : AT4G14880.3 Gene name : AT4G14880.3 Source : AraCyc KEGG ID : AT4G14880 Transformer : CYS / CYS_root Source ID : AT4G14880.2 Gene name : AT4G14880.2 Source : AraCyc KEGG ID : AT4G14880 Transformer : CYS / CYS_root Source ID : AT4G14880.1 Gene name : AT4G14880.1 Source : AraCyc KEGG ID : AT4G14880 Transformer : CYS / CYS_root Source ID : AT2G36180.1 Gene name : AT2G36180.1 Source : AraCyc KEGG ID : AT2G36180 Transformer : FF / FF_root Source ID : AT3G55870.1 Gene name : AT3G55870.1 Source : AraCyc KEGG ID : AT3G55870 Transformer : TRP / TRP_root Source ID : AT5G56720.1 Gene name : AT5G56720.1 Source : AraCyc KEGG ID : AT5G56720 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT2G44530.1 Gene name : AT2G44530.1 Source : AraCyc KEGG ID : AT2G44530 Transformer : RDPK Source ID : AT2G35020.1 Gene name : AT2G35020.1 Source : AraCyc KEGG ID : AT2G35020 Transformer : UGP / UGP_root Source ID : AT1G14810.1 Gene name : AT1G14810.1 Source : AraCyc KEGG ID : AT1G14810 Transformer : Hom / Hom_root Source ID : AT5G50370.1 Gene name : AT5G50370.1 Source : AraCyc KEGG ID : AT5G50370 Transformer : AT5G50370.1 Source ID : AT1G42970.1 Gene name : AT1G42970.1 Source : AraCyc KEGG ID : AT1G42970 Transformer : GAPDH / GAPDH_root / GAPDH_plastid Source ID : AT2G33040.1 Gene name : AT2G33040.1 Source : AraCyc KEGG ID : AT2G33040 Transformer : ATP synthase Source ID : AT1G71890.1 Gene name : AT1G71890.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT3G55410.1 Gene name : AT3G55410.1 Source : AraCyc KEGG ID : AT3G55410 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT4G32840.1 Gene name : AT4G32840.1 Source : AraCyc KEGG ID : AT4G32840 Transformer : PFK / PFK_root Source ID : AT1G70730.3 Gene name : AT1G70730.3 Source : AraCyc KEGG ID : AT1G70730 Transformer : PGM3 / PGM3_root / PGM3_plastid Source ID : AT1G55920.1 Gene name : AT1G55920.1 Source : AraCyc KEGG ID : AT1G55920 Transformer : CYS / CYS_root Source ID : AT1G70730.2 Gene name : AT1G70730.2 Source : AraCyc KEGG ID : AT1G70730 Transformer : PGM3 / PGM3_root / PGM3_plastid Source ID : AT1G70730.1 Gene name : AT1G70730.1 Source : AraCyc KEGG ID : AT1G70730 Transformer : PGM3 / PGM3_root / PGM3_plastid Source ID : AT2G19860.1 Gene name : AT2G19860.1 Source : AraCyc KEGG ID : AT2G19860 Transformer : GLK / GLK_root / FK / FK_root Source ID : AT1G75330.1 Gene name : AT1G75330.1 Source : AraCyc KEGG ID : AT1G75330 Transformer : ARG / ARG_root Source ID : AT2G39800.4 Gene name : AT2G39800.4 Source : AraCyc KEGG ID : AT2G39800 Transformer : PRO / PRO_root Source ID : AT2G39800.3 Gene name : AT2G39800.3 Source : AraCyc KEGG ID : AT2G39800 Transformer : PRO / PRO_root Source ID : AT2G39800.2 Gene name : AT2G39800.2 Source : AraCyc KEGG ID : AT2G39800 Transformer : PRO / PRO_root Source ID : AT2G39270.1 Gene name : AT2G39270.1 Source : AraCyc KEGG ID : AT2G39270 Transformer : AT2G39270.1 Source ID : AT2G39800.1 Gene name : AT2G39800.1 Source : AraCyc KEGG ID : AT2G39800 Transformer : PRO / PRO_root Source ID : AT3G26900.3 Gene name : AT3G26900.3 Source : AraCyc Transformer : Chor / Chor_root Source ID : AT3G26900.2 Gene name : AT3G26900.2 Source : AraCyc Transformer : Chor / Chor_root Source ID : AT5G53460.3 Gene name : AT5G53460.3 Source : AraCyc KEGG ID : AT5G53460 Transformer : GLU / GLU_plastid / GLU_root Source ID : AT3G26900.1 Gene name : AT3G26900.1 Source : AraCyc Transformer : Chor / Chor_root Source ID : AT5G53460.2 Gene name : AT5G53460.2 Source : AraCyc KEGG ID : AT5G53460 Transformer : GLU / GLU_plastid / GLU_root Source ID : AT5G53460.1 Gene name : AT5G53460.1 Source : AraCyc KEGG ID : AT5G53460 Transformer : GLU / GLU_plastid / GLU_root Source ID : AT2G35370.1 Gene name : AT2G35370.1 Source : AraCyc KEGG ID : AT2G35370 Transformer : GDC Source ID : AT5G04140.2 Gene name : AT5G04140.2 Source : AraCyc KEGG ID : AT5G04140 Transformer : GLU / GLU_plastid / GLU_root Source ID : AT1G69370.1 Gene name : AT1G69370.1 Source : AraCyc KEGG ID : AT1G69370 Transformer : Tyr / Tyr_root / Phe / Phe_root Source ID : AT5G04140.1 Gene name : AT5G04140.1 Source : AraCyc KEGG ID : AT5G04140 Transformer : GLU / GLU_plastid / GLU_root Source ID : AT3G04050.1 Gene name : AT3G04050.1 Source : AraCyc KEGG ID : AT3G04050 Transformer : PK / PK_root Source ID : AT1G56560.1 Gene name : AT1G56560.1 Source : AraCyc KEGG ID : AT1G56560 Transformer : FF / FF_root Source ID : ATCG00480.1 Gene name : ATCG00480.1 Source : AraCyc KEGG ID : ATCG00480 Transformer : ATP synthase Source ID : AT1G14230.1 Gene name : AT1G14230.1 Source : AraCyc KEGG ID : AT1G14230 Transformer : UDP / UDP_root / UTP / UTP_root / CMP / CMP_root Source ID : AT2G35840.3 Gene name : AT2G35840.3 Source : AraCyc KEGG ID : AT2G35840 Transformer : SPP Source ID : AT1G18070.3 Gene name : AT1G18070.3 Source : AraCyc KEGG ID : GQT-2071 Transformer : SUL / SUL_root Source ID : AT2G35840.2 Gene name : AT2G35840.2 Source : AraCyc KEGG ID : AT2G35840 Transformer : SPP Source ID : AT1G18070.2 Gene name : AT1G18070.2 Source : AraCyc KEGG ID : GQT-2071 Transformer : SUL / SUL_root Source ID : AT2G35840.1 Gene name : AT2G35840.1 Source : AraCyc KEGG ID : AT2G35840 Transformer : SPP Source ID : AT1G18070.1 Gene name : AT1G18070.1 Source : AraCyc KEGG ID : GQT-2071 Transformer : SUL / SUL_root Source ID : AT3G04520.2 Gene name : AT3G04520.2 Source : AraCyc KEGG ID : AT3G04520 Transformer : GHMT / GHMT_root Source ID : AT3G04520.1 Gene name : AT3G04520.1 Source : AraCyc KEGG ID : AT3G04520 Transformer : GHMT / GHMT_root Source ID : AT3G15020.2 Gene name : AT3G15020.2 Source : AraCyc KEGG ID : AT3G15020 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT3G15020.1 Gene name : AT3G15020.1 Source : AraCyc KEGG ID : AT3G15020 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT1G06020.1 Gene name : AT1G06020.1 Source : AraCyc KEGG ID : AT1G06020 Transformer : FK / FK_root Source ID : AT4G02120.1 Gene name : AT4G02120.1 Source : AraCyc KEGG ID : AT4G02120 Transformer : AT4G02120.1 Source ID : AT1G62800.2 Gene name : AT1G62800.2 Source : AraCyc KEGG ID : AT1G62800 Transformer : AT1G62800.2 Source ID : AT1G64190.1 Gene name : AT1G64190.1 Source : AraCyc KEGG ID : AT1G64190 Transformer : PGDH / PGDH_root Source ID : AT5G10920.1 Gene name : AT5G10920.1 Source : AraCyc KEGG ID : AT5G10920 Transformer : ARG / ARG_root Source ID : AT1G68560.1 Gene name : AT1G68560.1 Source : AraCyc KEGG ID : AT1G68560 Transformer : MH Source ID : AT2G42910.1 Gene name : AT2G42910.1 Source : AraCyc KEGG ID : AT2G42910 Transformer : AT2G42910.1 Source ID : AT2G41220.1 Gene name : AT2G41220.1 Source : AraCyc KEGG ID : AT2G41220 Transformer : GLU / GLU_plastid / GLU_root Source ID : AT4G22930.1 Gene name : AT4G22930.1 Source : AraCyc KEGG ID : AT4G22930 Transformer : UMP / UMP_root Source ID : AT5G22510.1 Gene name : AT5G22510.1 Source : AraCyc KEGG ID : AT5G22510 Transformer : FF / FF_root Source ID : AT2G47510.2 Gene name : AT2G47510.2 Source : AraCyc KEGG ID : AT2G47510 Transformer : FUM / FUM_root Source ID : AT2G47510.1 Gene name : AT2G47510.1 Source : AraCyc KEGG ID : AT2G47510 Transformer : FUM / FUM_root Source ID : AT1G70560.1 Gene name : AT1G70560.1 Source : AraCyc KEGG ID : AT1G70560 Transformer : Leu / Leu_root Source ID : AT5G43610.1 Gene name : AT5G43610.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT3G22960.1 Gene name : AT3G22960.1 Source : AraCyc KEGG ID : AT3G22960 Transformer : PK / PK_root Source ID : AT1G79530.1 Gene name : AT1G79530.1 Source : AraCyc KEGG ID : AT1G79530 Transformer : GAPDH / GAPDH_root Source ID : AT2G42790.1 Gene name : AT2G42790.1 Source : AraCyc KEGG ID : AT2G42790 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT2G01290.1 Gene name : AT2G01290.1 Source : AraCyc KEGG ID : AT2G01290 Transformer : R5PI / R5PI_root Source ID : AT1G79470.1 Gene name : AT1G79470.1 Source : AraCyc KEGG ID : AT1G79470 Transformer : GMP / GMP_root Source ID : AT3G55650.1 Gene name : AT3G55650.1 Source : AraCyc KEGG ID : AT3G55650 Transformer : PK / PK_root Source ID : AT1G04920.1 Gene name : AT1G04920.1 Source : AraCyc KEGG ID : AT1G04920 Transformer : SPS Source ID : AT4G09520.1 Gene name : AT4G09520.1 Source : AraCyc KEGG ID : AT4G09520 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT1G53310.3 Gene name : AT1G53310.3 Source : AraCyc KEGG ID : AT1G53310 Transformer : PPD_PPC / PPD_PPC_root Source ID : AT1G53310.2 Gene name : AT1G53310.2 Source : AraCyc KEGG ID : AT1G53310 Transformer : PPD_PPC / PPD_PPC_root Source ID : ATMG01190.1 Gene name : ATMG01190.1 Source : AraCyc KEGG ID : ATMG01190 Transformer : ATP synthase Source ID : AT1G53310.1 Gene name : AT1G53310.1 Source : AraCyc KEGG ID : AT1G53310 Transformer : PPD_PPC / PPD_PPC_root Source ID : AT4G00490.1 Gene name : AT4G00490.1 Source : AraCyc KEGG ID : AT4G00490 Transformer : BAM Source ID : AT5G61580.2 Gene name : AT5G61580.2 Source : AraCyc KEGG ID : AT5G61580 Transformer : PFK / PFK_root Source ID : AT5G61580.1 Gene name : AT5G61580.1 Source : AraCyc KEGG ID : AT5G61580 Transformer : PFK / PFK_root Source ID : AT1G32480.1 Gene name : AT1G32480.1 Source : AraCyc KEGG ID : AT1G32480 Transformer : IDH / IDH_root / IDH_mitochondria / IDH_mitochondria_root Source ID : AT1G22410.1 Gene name : AT1G22410.1 Source : AraCyc KEGG ID : AT1G22410 Transformer : Chor / Chor_root Source ID : AT3G49360.1 Gene name : AT3G49360.1 Source : AraCyc KEGG ID : AT3G49360 Transformer : PGL / PGL_root Source ID : AT2G21170.2 Gene name : AT2G21170.2 Source : AraCyc KEGG ID : AT2G21170 Transformer : TPI_plastid Source ID : AT2G21170.1 Gene name : AT2G21170.1 Source : AraCyc KEGG ID : AT2G21170 Transformer : TPI_plastid Source ID : AT2G45880.1 Gene name : AT2G45880.1 Source : AraCyc KEGG ID : AT2G45880 Transformer : BAM Source ID : AT1G11790.2 Gene name : AT1G11790.2 Source : AraCyc KEGG ID : AT1G11790 Transformer : Phe / Phe_root Source ID : AT1G11790.1 Gene name : AT1G11790.1 Source : AraCyc KEGG ID : AT1G11790 Transformer : Phe / Phe_root Source ID : AT1G50110.1 Gene name : AT1G50110.1 Source : AraCyc KEGG ID : AT1G50110 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT3G58740.1 Gene name : AT3G58740.1 Source : AraCyc KEGG ID : AT3G58740 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT2G47400.1 Gene name : AT2G47400.1 Source : AraCyc KEGG ID : AT2G47400 Transformer : GAPDH / GAPDH_root / PRK_plastid Source ID : AT5G42740.1 Gene name : AT5G42740.1 Source : AraCyc KEGG ID : AT5G42740 Transformer : PGI / PGI_root / PGI_plastid Source ID : AT3G57050.1 Gene name : AT3G57050.1 Source : AraCyc KEGG ID : AT3G57050 Transformer : MET / MET_root Source ID : AT3G17240.3 Gene name : AT3G17240.3 Source : AraCyc KEGG ID : AT3G17240 Transformer : PDH / PDH_root / Suc-CoA / Suc-CoA_root / AT Source ID : AT3G17240.2 Gene name : AT3G17240.2 Source : AraCyc KEGG ID : AT3G17240 Transformer : PDH / PDH_root / Suc-CoA / Suc-CoA_root / AT Source ID : AT3G17240.1 Gene name : AT3G17240.1 Source : AraCyc KEGG ID : AT3G17240 Transformer : PDH / PDH_root / Suc-CoA / Suc-CoA_root / AT Source ID : AT5G38430.1 Gene name : AT5G38430.1 Source : AraCyc KEGG ID : AT5G38430 Transformer : RPC_plastid Source ID : AT5G14590.1 Gene name : AT5G14590.1 Source : AraCyc KEGG ID : AT5G14590 Transformer : IDH Source ID : AT5G08690.1 Gene name : AT5G08690.1 Source : AraCyc KEGG ID : AT5G08690 Transformer : ATP synthase Source ID : AT3G16950.2 Gene name : AT3G16950.2 Source : AraCyc KEGG ID : AT3G16950 Transformer : PDH / PDH_root / Suc-CoA / Suc-CoA_root / AT Source ID : AT3G16950.1 Gene name : AT3G16950.1 Source : AraCyc KEGG ID : AT3G16950 Transformer : PDH / PDH_root / Suc-CoA / Suc-CoA_root / AT Source ID : AT5G40760.1 Gene name : AT5G40760.1 Source : AraCyc KEGG ID : AT5G40760 Transformer : G6PDH / G6PDH_root Source ID : AT2G20420.1 Gene name : AT2G20420.1 Source : AraCyc KEGG ID : AT2G20420 Transformer : SCL / SCL_root Source ID : AT3G25860.1 Gene name : AT3G25860.1 Source : AraCyc KEGG ID : AT3G25860 Transformer : PDH / PDH_root Source ID : AT1G15700.1 Gene name : AT1G15700.1 Source : AraCyc KEGG ID : GQT-686 Transformer : ATP synthase Source ID : AT5G47810.1 Gene name : AT5G47810.1 Source : AraCyc Transformer : PFK / PFK_root Source ID : AT1G21540.1 Gene name : AT1G21540.1 Source : AraCyc KEGG ID : AT1G21540 Transformer : ILE / ILE_root Source ID : ATMG01080.1 Gene name : ATMG01080.1 Source : AraCyc KEGG ID : ATMG01080 Transformer : ATP synthase Source ID : AT5G27410.2 Gene name : AT5G27410.2 Source : AraCyc KEGG ID : GQT-279 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT1G55120.3 Gene name : AT1G55120.3 Source : AraCyc KEGG ID : AT1G55120 Transformer : FF / FF_root Source ID : AT5G27410.1 Gene name : AT5G27410.1 Source : AraCyc KEGG ID : GQT-279 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT4G35650.1 Gene name : AT4G35650.1 Source : AraCyc KEGG ID : AT4G35650 Transformer : IDH / IDH_root / IDH_mitochondria / IDH_mitochondria_root Source ID : AT1G55120.2 Gene name : AT1G55120.2 Source : AraCyc KEGG ID : AT1G55120 Transformer : FF / FF_root Source ID : AT1G55120.1 Gene name : AT1G55120.1 Source : AraCyc KEGG ID : AT1G55120 Transformer : FF / FF_root Source ID : AT1G50460.1 Gene name : AT1G50460.1 Source : AraCyc KEGG ID : AT1G50460 Transformer : GLK / GLK_root / FK / FK_root Source ID : AT4G20320.1 Gene name : AT4G20320.1 Source : AraCyc KEGG ID : AT4G20320 Transformer : AT4G20320.1 Source ID : AT5G35170.1 Gene name : AT5G35170.1 Source : AraCyc KEGG ID : AT5G35170 Transformer : AT5G35170.1 Source ID : AT3G52340.3 Gene name : AT3G52340.3 Source : AraCyc KEGG ID : AT3G52340 Transformer : SPP Source ID : AT5G65780.1 Gene name : AT5G65780.1 Source : AraCyc KEGG ID : AT5G65780 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT3G52340.2 Gene name : AT3G52340.2 Source : AraCyc KEGG ID : AT3G52340 Transformer : SPP Source ID : AT3G52340.1 Gene name : AT3G52340.1 Source : AraCyc KEGG ID : AT3G52340 Transformer : SPP Source ID : AT3G21110.2 Gene name : AT3G21110.2 Source : AraCyc KEGG ID : AT3G21110 Transformer : AICAR / AICAR_root Source ID : AT3G21110.1 Gene name : AT3G21110.1 Source : AraCyc KEGG ID : AT3G21110 Transformer : AICAR / AICAR_root Source ID : AT1G22710.1 Gene name : AT1G22710.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT1G59900.1 Gene name : AT1G59900.1 Source : AraCyc KEGG ID : AT1G59900 Transformer : PDH / PDH_root Source ID : AT2G27820.1 Gene name : AT2G27820.1 Source : AraCyc KEGG ID : AT2G27820 Transformer : Phe / Phe_root Source ID : AT1G71100.1 Gene name : AT1G71100.1 Source : AraCyc KEGG ID : AT1G71100 Transformer : R5PI / R5PI_root Source ID : AT2G35040.2 Gene name : AT2G35040.2 Source : AraCyc KEGG ID : AT2G35040 Transformer : IMP / IMP_root Source ID : AT2G35040.1 Gene name : AT2G35040.1 Source : AraCyc KEGG ID : AT2G35040 Transformer : IMP / IMP_root Source ID : AT5G63400.1 Gene name : AT5G63400.1 Source : AraCyc KEGG ID : AT5G63400 Transformer : AT5G63400.1 Source ID : AT3G14390.1 Gene name : AT3G14390.1 Source : AraCyc KEGG ID : AT3G14390 Transformer : Lys / Lys_root Source ID : AT3G22740.1 Gene name : AT3G22740.1 Source : AraCyc KEGG ID : AT3G22740 Transformer : MET / MET_root Source ID : AT2G07698.1 Gene name : AT2G07698.1 Source : AraCyc KEGG ID : AT2G07698 Transformer : ATP synthase Source ID : AT2G19940.2 Gene name : AT2G19940.2 Source : AraCyc KEGG ID : AT2G19940 Transformer : Orni / Orni_root Source ID : AT2G19940.1 Gene name : AT2G19940.1 Source : AraCyc KEGG ID : AT2G19940 Transformer : Orni / Orni_root Source ID : AT5G43330.1 Gene name : AT5G43330.1 Source : AraCyc KEGG ID : AT5G43330 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT1G68750.1 Gene name : AT1G68750.1 Source : AraCyc KEGG ID : AT1G68750 Transformer : PPD_PPC / PPD_PPC_root Source ID : ATCG00150.1 Gene name : ATCG00150.1 Source : AraCyc KEGG ID : GQT-3803 Transformer : ATP synthase Source ID : AT2G21940.5 Gene name : AT2G21940.5 Source : AraCyc KEGG ID : AT2G21940 Transformer : Chor / Chor_root Source ID : AT1G07780.5 Gene name : AT1G07780.5 Source : AraCyc KEGG ID : GQT-135 Transformer : TRP / TRP_root Source ID : AT2G21940.4 Gene name : AT2G21940.4 Source : AraCyc KEGG ID : AT2G21940 Transformer : Chor / Chor_root Source ID : AT2G21940.3 Gene name : AT2G21940.3 Source : AraCyc KEGG ID : AT2G21940 Transformer : Chor / Chor_root Source ID : AT1G07780.3 Gene name : AT1G07780.3 Source : AraCyc KEGG ID : AT1G07780 Transformer : TRP / TRP_root Source ID : AT2G21940.2 Gene name : AT2G21940.2 Source : AraCyc KEGG ID : AT2G21940 Transformer : Chor / Chor_root Source ID : AT1G07780.2 Gene name : AT1G07780.2 Source : AraCyc KEGG ID : GQT-135 Transformer : TRP / TRP_root Source ID : AT2G21940.1 Gene name : AT2G21940.1 Source : AraCyc KEGG ID : AT2G21940 Transformer : Chor / Chor_root Source ID : AT3G63250.2 Gene name : AT3G63250.2 Source : AraCyc KEGG ID : AT3G63250 Transformer : MET / MET_root Source ID : AT1G07780.1 Gene name : AT1G07780.1 Source : AraCyc KEGG ID : GQT-135 Transformer : TRP / TRP_root Source ID : AT3G63250.1 Gene name : AT3G63250.1 Source : AraCyc KEGG ID : AT3G63250 Transformer : MET / MET_root Source ID : AT1G25083.1 Gene name : AT1G25083.1 Source : AraCyc KEGG ID : AT1G25083 Transformer : TRP / TRP_root Source ID : AT4G04640.1 Gene name : AT4G04640.1 Source : AraCyc KEGG ID : GQT-1336 Transformer : ATP synthase Source ID : AT4G14910.3 Gene name : AT4G14910.3 Source : AraCyc KEGG ID : AT4G14910 Transformer : His / His_root Source ID : AT4G14910.2 Gene name : AT4G14910.2 Source : AraCyc KEGG ID : AT4G14910 Transformer : His / His_root Source ID : AT4G14910.1 Gene name : AT4G14910.1 Source : AraCyc KEGG ID : AT4G14910 Transformer : His / His_root Source ID : AT1G80555.1 Gene name : AT1G80555.1 Source : AraCyc KEGG ID : AT1G80555 Transformer : Leu / Leu_root Source ID : AT1G55880.1 Gene name : AT1G55880.1 Source : AraCyc KEGG ID : AT1G55880 Transformer : CYS / CYS_root Source ID : AT4G37930.1 Gene name : AT4G37930.1 Source : AraCyc KEGG ID : AT4G37930 Transformer : GHMT / GHMT_root Source ID : AT2G35390.2 Gene name : AT2G35390.2 Source : AraCyc KEGG ID : AT2G35390 Transformer : AT2G35390.2 Source ID : AT1G80360.1 Gene name : AT1G80360.1 Source : AraCyc KEGG ID : AT1G80360 Transformer : AT1G80360.1 Source ID : AT1G71920.3 Gene name : AT1G71920.3 Source : AraCyc KEGG ID : AT1G71920 Transformer : His / His_root Source ID : AT1G71920.2 Gene name : AT1G71920.2 Source : AraCyc KEGG ID : AT1G71920 Transformer : His / His_root Source ID : AT1G71920.1 Gene name : AT1G71920.1 Source : AraCyc KEGG ID : AT1G71920 Transformer : His / His_root Source ID : AT1G14250.1 Gene name : AT1G14250.1 Source : AraCyc KEGG ID : AT1G14250 Transformer : UDP / UDP_root / UTP / UTP_root / CMP / CMP_root Source ID : AT3G03780.3 Gene name : AT3G03780.3 Source : AraCyc KEGG ID : AT3G03780 Transformer : MET / MET_root Source ID : AT3G03780.2 Gene name : AT3G03780.2 Source : AraCyc KEGG ID : AT3G03780 Transformer : MET / MET_root Source ID : AT3G03780.1 Gene name : AT3G03780.1 Source : AraCyc KEGG ID : AT3G03780 Transformer : MET / MET_root Source ID : AT5G16290.2 Gene name : AT5G16290.2 Source : AraCyc KEGG ID : AT5G16290 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT5G56630.1 Gene name : AT5G56630.1 Source : AraCyc KEGG ID : AT5G56630 Transformer : PFK / PFK_root Source ID : AT5G16290.1 Gene name : AT5G16290.1 Source : AraCyc KEGG ID : AT5G16290 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT3G54090.1 Gene name : AT3G54090.1 Source : AraCyc KEGG ID : AT3G54090 Transformer : FK / FK_root Source ID : AT4G26910.3 Gene name : AT4G26910.3 Source : AraCyc KEGG ID : AT4G26910 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT4G26910.2 Gene name : AT4G26910.2 Source : AraCyc KEGG ID : AT4G26910 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT4G26910.1 Gene name : AT4G26910.1 Source : AraCyc KEGG ID : AT4G26910 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT1G25220.2 Gene name : AT1G25220.2 Source : AraCyc KEGG ID : AT1G25220 Transformer : TRP / TRP_root Source ID : AT1G25220.1 Gene name : AT1G25220.1 Source : AraCyc KEGG ID : AT1G25220 Transformer : TRP / TRP_root Source ID : AT5G36700.4 Gene name : AT5G36700.4 Source : AraCyc KEGG ID : AT5G36700 Transformer : PGP Source ID : AT4G01850.2 Gene name : AT4G01850.2 Source : AraCyc KEGG ID : AT4G01850 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT4G33510.2 Gene name : AT4G33510.2 Source : AraCyc KEGG ID : AT4G33510 Transformer : Chor / Chor_root Source ID : AT5G36700.3 Gene name : AT5G36700.3 Source : AraCyc KEGG ID : AT5G36700 Transformer : PGP Source ID : AT4G01850.1 Gene name : AT4G01850.1 Source : AraCyc KEGG ID : AT4G01850 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT4G33510.1 Gene name : AT4G33510.1 Source : AraCyc KEGG ID : AT4G33510 Transformer : Chor / Chor_root Source ID : AT5G36700.2 Gene name : AT5G36700.2 Source : AraCyc KEGG ID : AT5G36700 Transformer : PGP Source ID : AT5G36700.1 Gene name : AT5G36700.1 Source : AraCyc KEGG ID : AT5G36700 Transformer : PGP Source ID : AT4G02610.1 Gene name : AT4G02610.1 Source : AraCyc KEGG ID : AT4G02610 Transformer : TRP / TRP_root Source ID : AT1G10760.1 Gene name : AT1G10760.1 Source : AraCyc KEGG ID : AT1G10760 Transformer : SK Source ID : AT3G07630.1 Gene name : AT3G07630.1 Source : AraCyc KEGG ID : AT3G07630 Transformer : Phe / Phe_root Source ID : AT1G70580.1 Gene name : AT1G70580.1 Source : AraCyc KEGG ID : AT1G70580 Transformer : GAT Source ID : AT1G13440.2 Gene name : AT1G13440.2 Source : AraCyc KEGG ID : AT1G13440 Transformer : GAPDH / GAPDH_root Source ID : AT1G13440.1 Gene name : AT1G13440.1 Source : AraCyc KEGG ID : AT1G13440 Transformer : GAPDH / GAPDH_root Source ID : AT1G31860.1 Gene name : AT1G31860.1 Source : AraCyc KEGG ID : AT1G31860 Transformer : His / His_root Source ID : AT5G03290.1 Gene name : AT5G03290.1 Source : AraCyc KEGG ID : AT5G03290 Transformer : IDH / IDH_root / IDH_mitochondria / IDH_mitochondria_root Source ID : AT1G22020.1 Gene name : AT1G22020.1 Source : AraCyc KEGG ID : AT1G22020 Transformer : GHMT / GHMT_root Source ID : AT5G39320.1 Gene name : AT5G39320.1 Source : AraCyc KEGG ID : AT5G39320 Transformer : UGD / UGD_root Source ID : AT1G66200.2 Gene name : AT1G66200.2 Source : AraCyc KEGG ID : AT1G66200 Transformer : GLN / GLN_plastid / GLN_root Source ID : AT1G66200.1 Gene name : AT1G66200.1 Source : AraCyc KEGG ID : AT1G66200 Transformer : GLN / GLN_plastid / GLN_root Source ID : AT1G79550.2 Gene name : AT1G79550.2 Source : AraCyc KEGG ID : AT1G79550 Transformer : PGK / PGK_root / PGK_Plastid Source ID : AT3G48740.1 Gene name : AT3G48740.1 Source : AraCyc Transformer : T.Sucrose.mesophyll Source ID : AT1G79550.1 Gene name : AT1G79550.1 Source : AraCyc KEGG ID : AT1G79550 Transformer : PGK / PGK_root / PGK_Plastid Source ID : AT2G16570.1 Gene name : AT2G16570.1 Source : AraCyc KEGG ID : AT2G16570 Transformer : AICAR / AICAR_root Source ID : AT3G52990.2 Gene name : AT3G52990.2 Source : AraCyc KEGG ID : AT3G52990 Transformer : PK / PK_root Source ID : AT3G52990.1 Gene name : AT3G52990.1 Source : AraCyc KEGG ID : AT3G52990 Transformer : PK / PK_root Source ID : AT4G14680.1 Gene name : AT4G14680.1 Source : AraCyc KEGG ID : AT4G14680 Transformer : APS / SUL_root Source ID : AT5G26780.3 Gene name : AT5G26780.3 Source : AraCyc KEGG ID : AT5G26780 Transformer : GHMT / GHMT_root Source ID : AT4G23590.1 Gene name : AT4G23590.1 Source : AraCyc KEGG ID : AT4G23590 Transformer : MET / MET_root Source ID : AT5G26780.2 Gene name : AT5G26780.2 Source : AraCyc KEGG ID : GQT-498 Transformer : GHMT / GHMT_root Source ID : AT3G47520.1 Gene name : AT3G47520.1 Source : AraCyc KEGG ID : AT3G47520 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT5G26780.1 Gene name : AT5G26780.1 Source : AraCyc KEGG ID : GQT-498 Transformer : GHMT / GHMT_root Source ID : AT3G06350.1 Gene name : AT3G06350.1 Source : AraCyc KEGG ID : AT3G06350 Transformer : Chor / Chor_root Source ID : AT4G26270.1 Gene name : AT4G26270.1 Source : AraCyc KEGG ID : AT4G26270 Transformer : PFK / PFK_root Source ID : AT4G17830.2 Gene name : AT4G17830.2 Source : AraCyc KEGG ID : AT4G17830 Transformer : Orni / Orni_root Source ID : AT3G22460.1 Gene name : AT3G22460.1 Source : AraCyc KEGG ID : AT3G22460 Transformer : CYS / CYS_root Source ID : AT4G17830.1 Gene name : AT4G17830.1 Source : AraCyc KEGG ID : AT4G17830 Transformer : Orni / Orni_root Source ID : AT1G62180.2 Gene name : AT1G62180.2 Source : AraCyc KEGG ID : AT1G62180 Transformer : SUL / SUL_root Source ID : AT5G24400.1 Gene name : AT5G24400.1 Source : AraCyc KEGG ID : AT5G24400 Transformer : PGL / PGL_root Source ID : AT1G62180.1 Gene name : AT1G62180.1 Source : AraCyc KEGG ID : AT1G62180 Transformer : APS_reductase / SUL_root Source ID : AT5G52560.1 Gene name : AT5G52560.1 Source : AraCyc KEGG ID : AT5G52560 Transformer : UGP / UGP_root Source ID : AT1G30120.1 Gene name : AT1G30120.1 Source : AraCyc KEGG ID : AT1G30120 Transformer : PDH / PDH_root Source ID : AT4G13930.1 Gene name : AT4G13930.1 Source : AraCyc KEGG ID : AT4G13930 Transformer : GHMT / GHMT_root Source ID : AT1G02500.2 Gene name : AT1G02500.2 Source : AraCyc KEGG ID : AT1G02500 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT1G02500.1 Gene name : AT1G02500.1 Source : AraCyc KEGG ID : AT1G02500 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT4G23600.3 Gene name : AT4G23600.3 Source : AraCyc KEGG ID : AT4G23600 Transformer : MET / MET_root Source ID : AT1G47840.1 Gene name : AT1G47840.1 Source : AraCyc KEGG ID : AT1G47840 Transformer : GLK / GLK_root / FK / FK_root Source ID : AT4G23600.2 Gene name : AT4G23600.2 Source : AraCyc KEGG ID : AT4G23600 Transformer : MET / MET_root Source ID : AT4G23600.1 Gene name : AT4G23600.1 Source : AraCyc KEGG ID : AT4G23600 Transformer : MET / MET_root Source ID : AT4G35260.1 Gene name : AT4G35260.1 Source : AraCyc KEGG ID : AT4G35260 Transformer : IDH / IDH_root / IDH_mitochondria / IDH_mitochondria_root Source ID : AT5G54950.1 Gene name : AT5G54950.1 Source : AraCyc KEGG ID : GQT-1114 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT4G10260.1 Gene name : AT4G10260.1 Source : AraCyc KEGG ID : AT4G10260 Transformer : FK / FK_root Source ID : AT1G34430.1 Gene name : AT1G34430.1 Source : AraCyc KEGG ID : AT1G34430 Transformer : PDH / PDH_root Source ID : AT1G68010.2 Gene name : AT1G68010.2 Source : AraCyc KEGG ID : AT1G68010 Transformer : HPR Source ID : AT1G68010.1 Gene name : AT1G68010.1 Source : AraCyc KEGG ID : AT1G68010 Transformer : HPR Source ID : AT5G28237.1 Gene name : AT5G28237.1 Source : AraCyc KEGG ID : AT5G28237 Transformer : TRP / TRP_root Source ID : AT5G58330.3 Gene name : AT5G58330.3 Source : AraCyc KEGG ID : AT5G58330 Transformer : NADP_MDH / NADP_malic_enzyme Source ID : AT5G58330.2 Gene name : AT5G58330.2 Source : AraCyc KEGG ID : AT5G58330 Transformer : NADP_MDH / NADP_malic_enzyme Source ID : AT5G58330.1 Gene name : AT5G58330.1 Source : AraCyc KEGG ID : AT5G58330 Transformer : NADP_MDH / NADP_malic_enzyme Source ID : AT1G63290.1 Gene name : AT1G63290.1 Source : AraCyc KEGG ID : AT1G63290 Transformer : RPE / RPE_root / RPE_palstid Source ID : AT1G09430.1 Gene name : AT1G09430.1 Source : AraCyc KEGG ID : AT1G09430 Transformer : ACL Source ID : AT1G31230.1 Gene name : AT1G31230.1 Source : AraCyc KEGG ID : AT1G31230 Transformer : Hom / Hom_root Source ID : AT5G56350.1 Gene name : AT5G56350.1 Source : AraCyc KEGG ID : AT5G56350 Transformer : PK / PK_root Source ID : AT2G44160.1 Gene name : AT2G44160.1 Source : AraCyc KEGG ID : AT2G44160 Transformer : MTHFR / MTHFR_root Source ID : AT1G10070.3 Gene name : AT1G10070.3 Source : AraCyc KEGG ID : AT1G10070 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT1G10070.2 Gene name : AT1G10070.2 Source : AraCyc KEGG ID : AT1G10070 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT1G10070.1 Gene name : AT1G10070.1 Source : AraCyc KEGG ID : AT1G10070 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT5G36880.2 Gene name : AT5G36880.2 Source : AraCyc KEGG ID : AT5G36880 Transformer : ACOL / ACOL_root / AT Source ID : AT5G36880.1 Gene name : AT5G36880.1 Source : AraCyc KEGG ID : AT5G36880 Transformer : ACOL / ACOL_root Source ID : AT5G19220.1 Gene name : AT5G19220.1 Source : AraCyc KEGG ID : AT5G19220 Transformer : ADG_plastid Source ID : AT5G11880.1 Gene name : AT5G11880.1 Source : AraCyc KEGG ID : AT5G11880 Transformer : Lys / Lys_root Source ID : AT2G17630.1 Gene name : AT2G17630.1 Source : AraCyc KEGG ID : AT2G17630 Transformer : SER / SER_root Source ID : AT4G39980.1 Gene name : AT4G39980.1 Source : AraCyc KEGG ID : AT4G39980 Transformer : Chor / Chor_root Source ID : AT1G24180.1 Gene name : AT1G24180.1 Source : AraCyc KEGG ID : AT1G24180 Transformer : PDH / PDH_root Source ID : AT1G74260.1 Gene name : AT1G74260.1 Source : AraCyc KEGG ID : AT1G74260 Transformer : AICAR / AICAR_root Source ID : AT3G60180.1 Gene name : AT3G60180.1 Source : AraCyc KEGG ID : GQT-1006 Transformer : AT3G60180.1 Source ID : AT3G01120.1 Gene name : AT3G01120.1 Source : AraCyc KEGG ID : AT3G01120 Transformer : MET / MET_root Source ID : AT2G35120.1 Gene name : AT2G35120.1 Source : AraCyc KEGG ID : AT2G35120 Transformer : GDC Source ID : AT3G06650.1 Gene name : AT3G06650.1 Source : AraCyc KEGG ID : AT3G06650 Transformer : ACL Source ID : AT5G26667.1 Gene name : AT5G26667.1 Source : AraCyc KEGG ID : AT5G26667 Transformer : AT5G26667.1 Source ID : AT1G07920.1 Gene name : AT1G07920.1 Source : AraCyc KEGG ID : GQT-1166 Transformer : CYS / CYS_root Source ID : AT1G72810.1 Gene name : AT1G72810.1 Source : AraCyc KEGG ID : AT1G72810 Transformer : Thr / Thr_root Source ID : AT5G52920.1 Gene name : AT5G52920.1 Source : AraCyc KEGG ID : AT5G52920 Transformer : PK / PK_root Source ID : AT1G26570.1 Gene name : AT1G26570.1 Source : AraCyc KEGG ID : AT1G26570 Transformer : UGD / UGD_root Source ID : AT5G56760.1 Gene name : AT5G56760.1 Source : AraCyc KEGG ID : AT5G56760 Transformer : CYS / CYS_root Source ID : AT5G07440.3 Gene name : AT5G07440.3 Source : AraCyc KEGG ID : AT5G07440 Transformer : GDH / GDH_root Source ID : AT5G55070.1 Gene name : AT5G55070.1 Source : AraCyc KEGG ID : AT5G55070 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT5G07440.2 Gene name : AT5G07440.2 Source : AraCyc KEGG ID : AT5G07440 Transformer : GDH / GDH_root Source ID : AT3G49680.2 Gene name : AT3G49680.2 Source : AraCyc KEGG ID : AT3G49680 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT5G07440.1 Gene name : AT5G07440.1 Source : AraCyc KEGG ID : AT5G07440 Transformer : GDH / GDH_root Source ID : AT3G49680.1 Gene name : AT3G49680.1 Source : AraCyc KEGG ID : AT3G49680 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT3G14940.1 Gene name : AT3G14940.1 Source : AraCyc KEGG ID : AT3G14940 Transformer : PPD_PPC / PPD_PPC_root Source ID : AT5G23010.1 Gene name : AT5G23010.1 Source : AraCyc KEGG ID : AT5G23010 Transformer : Leu / Leu_root Source ID : AT1G09780.1 Gene name : AT1G09780.1 Source : AraCyc KEGG ID : AT1G09780 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT2G22250.2 Gene name : AT2G22250.2 Source : AraCyc KEGG ID : AT2G22250 Transformer : Tyr / Tyr_root / Phe / Phe_root Source ID : AT5G13280.1 Gene name : AT5G13280.1 Source : AraCyc KEGG ID : AT5G13280 Transformer : Hom / Hom_root Source ID : AT1G56190.2 Gene name : AT1G56190.2 Source : AraCyc KEGG ID : AT1G56190 Transformer : PGK / PGK_root / PGK_Plastid Source ID : AT1G56190.1 Gene name : AT1G56190.1 Source : AraCyc KEGG ID : AT1G56190 Transformer : PGK / PGK_root / PGK_Plastid Source ID : AT3G19480.1 Gene name : AT3G19480.1 Source : AraCyc KEGG ID : AT3G19480 Transformer : SER / SER_root Source ID : AT2G07671.1 Gene name : AT2G07671.1 Source : AraCyc KEGG ID : AT2G07671 Transformer : ATP synthase Source ID : AT1G19920.1 Gene name : AT1G19920.1 Source : AraCyc KEGG ID : AT1G19920 Transformer : APS / SUL_root Source ID : AT5G65750.1 Gene name : AT5G65750.1 Source : AraCyc KEGG ID : AT5G65750 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT3G10050.1 Gene name : AT3G10050.1 Source : AraCyc KEGG ID : AT3G10050 Transformer : ILE / ILE_root Source ID : AT2G36230.1 Gene name : AT2G36230.1 Source : AraCyc KEGG ID : AT2G36230 Transformer : His / His_root Source ID : AT1G78050.1 Gene name : AT1G78050.1 Source : AraCyc KEGG ID : AT1G78050 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT3G59760.3 Gene name : AT3G59760.3 Source : AraCyc KEGG ID : AT3G59760 Transformer : CYS / CYS_root Source ID : AT3G59760.2 Gene name : AT3G59760.2 Source : AraCyc KEGG ID : AT3G59760 Transformer : CYS / CYS_root Source ID : AT3G49160.1 Gene name : AT3G49160.1 Source : AraCyc KEGG ID : AT3G49160 Transformer : PK / PK_root Source ID : AT3G59760.1 Gene name : AT3G59760.1 Source : AraCyc KEGG ID : AT3G59760 Transformer : CYS / CYS_root Source ID : AT5G28020.6 Gene name : AT5G28020.6 Source : AraCyc KEGG ID : AT5G28020 Transformer : CYS / CYS_root Source ID : AT1G80380.4 Gene name : AT1G80380.4 Source : AraCyc KEGG ID : AT1G80380 Transformer : GLYK Source ID : AT5G28020.5 Gene name : AT5G28020.5 Source : AraCyc KEGG ID : AT5G28020 Transformer : CYS / CYS_root Source ID : AT1G80380.3 Gene name : AT1G80380.3 Source : AraCyc KEGG ID : AT1G80380 Transformer : GLYK Source ID : AT5G28020.4 Gene name : AT5G28020.4 Source : AraCyc KEGG ID : AT5G28020 Transformer : CYS / CYS_root Source ID : AT4G26520.1 Gene name : AT4G26520.1 Source : AraCyc KEGG ID : AT4G26520 Transformer : Aldo / Aldo_root / Aldo_plastid Source ID : AT1G80380.2 Gene name : AT1G80380.2 Source : AraCyc KEGG ID : AT1G80380 Transformer : GLYK Source ID : AT5G28020.3 Gene name : AT5G28020.3 Source : AraCyc KEGG ID : AT5G28020 Transformer : CYS / CYS_root Source ID : AT1G80380.1 Gene name : AT1G80380.1 Source : AraCyc KEGG ID : AT1G80380 Transformer : GLYK Source ID : AT5G28020.2 Gene name : AT5G28020.2 Source : AraCyc KEGG ID : AT5G28020 Transformer : CYS / CYS_root Source ID : AT5G28020.1 Gene name : AT5G28020.1 Source : AraCyc KEGG ID : AT5G28020 Transformer : CYS / CYS_root Source ID : AT1G27680.1 Gene name : AT1G27680.1 Source : AraCyc KEGG ID : AT1G27680 Transformer : ADG_plastid Source ID : AT1G77760.1 Gene name : AT1G77760.1 Source : AraCyc KEGG ID : AT1G77760 Transformer : NR / NR_root Source ID : AT2G42600.2 Gene name : AT2G42600.2 Source : AraCyc Transformer : PPD_PPC / PPD_PPC_root Source ID : AT2G42600.1 Gene name : AT2G42600.1 Source : AraCyc KEGG ID : GQT-2357 Transformer : PPD_PPC / PPD_PPC_root Source ID : AT3G01010.1 Gene name : AT3G01010.1 Source : AraCyc KEGG ID : AT3G01010 Transformer : UGD / UGD_root Source ID : AT1G18640.2 Gene name : AT1G18640.2 Source : AraCyc KEGG ID : AT1G18640 Transformer : SER / SER_root Source ID : ATCG00120.1 Gene name : ATCG00120.1 Source : AraCyc KEGG ID : ATCG00120 Transformer : ATP synthase Source ID : AT1G71880.1 Gene name : AT1G71880.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT1G54220.2 Gene name : AT1G54220.2 Source : AraCyc KEGG ID : AT1G54220 Transformer : PDH / PDH_root Source ID : AT1G54220.1 Gene name : AT1G54220.1 Source : AraCyc KEGG ID : AT1G54220 Transformer : PDH / PDH_root Source ID : AT5G04590.1 Gene name : AT5G04590.1 Source : AraCyc KEGG ID : AT5G04590 Transformer : Sulfite_reductase / SUL_root Source ID : AT2G36580.1 Gene name : AT2G36580.1 Source : AraCyc KEGG ID : AT2G36580 Transformer : PK / PK_root Source ID : AT5G13170.1 Gene name : AT5G13170.1 Source : AraCyc Transformer : T.Sucrose.mesophyll Source ID : AT4G04610.1 Gene name : AT4G04610.1 Source : AraCyc KEGG ID : AT4G04610 Transformer : APS_reductase / SUL_root Source ID : AT1G77240.1 Gene name : AT1G77240.1 Source : AraCyc KEGG ID : GQT-590 Transformer : ILE / ILE_root Source ID : AT3G13784.1 Gene name : AT3G13784.1 Source : AraCyc KEGG ID : AT3G13784 Transformer : FF / FF_root Source ID : AT5G11720.1 Gene name : AT5G11720.1 Source : AraCyc KEGG ID : AT5G11720 Transformer : MH Source ID : AT5G09660.4 Gene name : AT5G09660.4 Source : AraCyc KEGG ID : AT5G09660 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT5G09660.3 Gene name : AT5G09660.3 Source : AraCyc KEGG ID : AT5G09660 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT5G09660.2 Gene name : AT5G09660.2 Source : AraCyc KEGG ID : AT5G09660 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT5G09660.1 Gene name : AT5G09660.1 Source : AraCyc KEGG ID : AT5G09660 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT3G52200.2 Gene name : AT3G52200.2 Source : AraCyc KEGG ID : AT3G52200 Transformer : PDH / PDH_root Source ID : AT3G55810.1 Gene name : AT3G55810.1 Source : AraCyc KEGG ID : AT3G55810 Transformer : PK / PK_root Source ID : AT3G52200.1 Gene name : AT3G52200.1 Source : AraCyc KEGG ID : AT3G52200 Transformer : PDH / PDH_root Source ID : AT3G17390.1 Gene name : AT3G17390.1 Source : AraCyc KEGG ID : AT3G17390 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT4G37840.1 Gene name : AT4G37840.1 Source : AraCyc KEGG ID : AT4G37840 Transformer : GLK / GLK_root / FK / FK_root Source ID : AT1G74040.1 Gene name : AT1G74040.1 Source : AraCyc KEGG ID : AT1G74040 Transformer : Leu / Leu_root Source ID : AT5G23250.2 Gene name : AT5G23250.2 Source : AraCyc KEGG ID : AT5G23250 Transformer : SCL / SCL_root Source ID : AT5G23250.1 Gene name : AT5G23250.1 Source : AraCyc KEGG ID : AT5G23250 Transformer : SCL / SCL_root Source ID : AT2G14670.1 Gene name : AT2G14670.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT5G41670.2 Gene name : AT5G41670.2 Source : AraCyc KEGG ID : AT5G41670 Transformer : PGDH / PGDH_root Source ID : AT3G62410.1 Gene name : AT3G62410.1 Source : AraCyc KEGG ID : AT3G62410 Transformer : GAPDH / GAPDH_root / PRK_plastid Source ID : AT5G41670.1 Gene name : AT5G41670.1 Source : AraCyc KEGG ID : AT5G41670 Transformer : PGDH / PGDH_root Source ID : AT2G21330.3 Gene name : AT2G21330.3 Source : AraCyc KEGG ID : AT2G21330 Transformer : Aldo_plastid Source ID : AT2G21330.2 Gene name : AT2G21330.2 Source : AraCyc KEGG ID : AT2G21330 Transformer : Aldo_plastid Source ID : AT2G21330.1 Gene name : AT2G21330.1 Source : AraCyc KEGG ID : AT2G21330 Transformer : Aldo_plastid Source ID : AT1G12240.1 Gene name : AT1G12240.1 Source : AraCyc KEGG ID : AT1G12240 Transformer : FF / FF_root Source ID : AT1G65930.1 Gene name : AT1G65930.1 Source : AraCyc KEGG ID : AT1G65930 Transformer : IDH Source ID : AT2G37690.1 Gene name : AT2G37690.1 Source : AraCyc KEGG ID : AT2G37690 Transformer : AICAR / AICAR_root Source ID : AT2G44350.2 Gene name : AT2G44350.2 Source : AraCyc KEGG ID : AT2G44350 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT2G36530.1 Gene name : AT2G36530.1 Source : AraCyc KEGG ID : AT2G36530 Transformer : ENO / ENO_root Source ID : AT2G44350.1 Gene name : AT2G44350.1 Source : AraCyc KEGG ID : AT2G44350 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT5G20980.2 Gene name : AT5G20980.2 Source : AraCyc KEGG ID : AT5G20980 Transformer : MET / MET_root Source ID : AT3G54470.1 Gene name : AT3G54470.1 Source : AraCyc KEGG ID : AT3G54470 Transformer : UMP / UMP_root Source ID : AT5G23660.1 Gene name : AT5G23660.1 Source : AraCyc Transformer : T.Sucrose.mesophyll Source ID : AT5G24420.1 Gene name : AT5G24420.1 Source : AraCyc KEGG ID : AT5G24420 Transformer : PGL / PGL_root Source ID : AT1G60810.1 Gene name : AT1G60810.1 Source : AraCyc KEGG ID : AT1G60810 Transformer : ACL Source ID : AT1G66570.1 Gene name : AT1G66570.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT5G38530.1 Gene name : AT5G38530.1 Source : AraCyc KEGG ID : AT5G38530 Transformer : TRP / TRP_root Source ID : AT1G32060.1 Gene name : AT1G32060.1 Source : AraCyc KEGG ID : AT1G32060 Transformer : GAPDH / GAPDH_root / PRK_plastid Source ID : AT1G10670.4 Gene name : AT1G10670.4 Source : AraCyc KEGG ID : AT1G10670 Transformer : ACL Source ID : AT1G10670.3 Gene name : AT1G10670.3 Source : AraCyc KEGG ID : AT1G10670 Transformer : ACL Source ID : AT1G10670.2 Gene name : AT1G10670.2 Source : AraCyc KEGG ID : AT1G10670 Transformer : ACL Source ID : AT1G10670.1 Gene name : AT1G10670.1 Source : AraCyc KEGG ID : AT1G10670 Transformer : ACL Source ID : AT5G35790.1 Gene name : AT5G35790.1 Source : AraCyc KEGG ID : AT5G35790 Transformer : G6PDH / G6PDH_root Source ID : ATMG00480.1 Gene name : ATMG00480.1 Source : AraCyc KEGG ID : ATMG00480 Transformer : ATP synthase Source ID : AT3G25960.1 Gene name : AT3G25960.1 Source : AraCyc KEGG ID : AT3G25960 Transformer : PK / PK_root Source ID : AT2G36880.2 Gene name : AT2G36880.2 Source : AraCyc KEGG ID : AT2G36880 Transformer : Suc-CoA / Suc-CoA_root Source ID : AT2G36880.1 Gene name : AT2G36880.1 Source : AraCyc KEGG ID : AT2G36880 Transformer : Suc-CoA / Suc-CoA_root / AT Source ID : AT2G02970.1 Gene name : AT2G02970.1 Source : AraCyc KEGG ID : AT2G02970 Transformer : UDP / UDP_root / UTP / UTP_root / CMP / CMP_root Source ID : AT4G13890.1 Gene name : AT4G13890.1 Source : AraCyc KEGG ID : AT4G13890 Transformer : SHMT / SHMT_root Source ID : AT1G50090.1 Gene name : AT1G50090.1 Source : AraCyc KEGG ID : AT1G50090 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT3G22890.1 Gene name : AT3G22890.1 Source : AraCyc KEGG ID : AT3G22890 Transformer : APS / SUL_root Source ID : AT1G36370.1 Gene name : AT1G36370.1 Source : AraCyc KEGG ID : AT1G36370 Transformer : SHMT / SHMT_root Source ID : AT3G57560.1 Gene name : AT3G57560.1 Source : AraCyc KEGG ID : AT3G57560 Transformer : Orni / Orni_root Source ID : AT3G20040.1 Gene name : AT3G20040.1 Source : AraCyc KEGG ID : AT3G20040 Transformer : GLK / GLK_root / FK / FK_root Source ID : AT1G37130.1 Gene name : AT1G37130.1 Source : AraCyc KEGG ID : AT1G37130 Transformer : NR / NR_root Source ID : AT3G59480.1 Gene name : AT3G59480.1 Source : AraCyc KEGG ID : AT3G59480 Transformer : FK / FK_root Source ID : AT4G09510.1 Gene name : AT4G09510.1 Source : AraCyc KEGG ID : AT4G09510 Transformer : FF / FF_root Source ID : AT2G22910.1 Gene name : AT2G22910.1 Source : AraCyc KEGG ID : AT2G22910 Transformer : Orni / Orni_root Source ID : AT4G37670.2 Gene name : AT4G37670.2 Source : AraCyc KEGG ID : AT4G37670 Transformer : Orno / Orni_root Source ID : AT5G51830.1 Gene name : AT5G51830.1 Source : AraCyc KEGG ID : AT5G51830 Transformer : FK / FK_root Source ID : AT4G37670.1 Gene name : AT4G37670.1 Source : AraCyc KEGG ID : AT4G37670 Transformer : Orni / Orni_root Source ID : AT5G05590.1 Gene name : AT5G05590.1 Source : AraCyc KEGG ID : AT5G05590 Transformer : TRP / TRP_root Source ID : AT5G10330.3 Gene name : AT5G10330.3 Source : AraCyc KEGG ID : AT5G10330 Transformer : His / His_root Source ID : AT1G32470.1 Gene name : AT1G32470.1 Source : AraCyc Transformer : GDC Source ID : AT5G10330.2 Gene name : AT5G10330.2 Source : AraCyc KEGG ID : AT5G10330 Transformer : His / His_root Source ID : AT5G10330.1 Gene name : AT5G10330.1 Source : AraCyc KEGG ID : AT5G10330 Transformer : His / His_root Source ID : AT4G13430.1 Gene name : AT4G13430.1 Source : AraCyc KEGG ID : AT4G13430 Transformer : Leu / Leu_root Source ID : AT1G53240.1 Gene name : AT1G53240.1 Source : AraCyc KEGG ID : AT1G53240 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT1G05610.1 Gene name : AT1G05610.1 Source : AraCyc KEGG ID : AT1G05610 Transformer : ADG_plastid Source ID : AT3G02360.2 Gene name : AT3G02360.2 Source : AraCyc Transformer : PGDH / PGDH_root Source ID : AT3G50520.1 Gene name : AT3G50520.1 Source : AraCyc KEGG ID : AT3G50520 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT3G02360.1 Gene name : AT3G02360.1 Source : AraCyc Transformer : PGDH / PGDH_root Source ID : AT3G13790.2 Gene name : AT3G13790.2 Source : AraCyc KEGG ID : AT3G13790 Transformer : FF / FF_root Source ID : AT3G13790.1 Gene name : AT3G13790.1 Source : AraCyc KEGG ID : AT3G13790 Transformer : FF / FF_root Source ID : AT1G69200.1 Gene name : AT1G69200.1 Source : AraCyc KEGG ID : AT1G69200 Transformer : FK / FK_root Source ID : AT1G25155.1 Gene name : AT1G25155.1 Source : AraCyc KEGG ID : AT1G25155 Transformer : TRP / TRP_root Source ID : AT2G13810.1 Gene name : AT2G13810.1 Source : AraCyc KEGG ID : AT2G13810 Transformer : Lys / Lys_root Source ID : AT4G21990.2 Gene name : AT4G21990.2 Source : AraCyc KEGG ID : AT4G21990 Transformer : SUL / SUL_root Source ID : AT5G38420.1 Gene name : AT5G38420.1 Source : AraCyc KEGG ID : AT5G38420 Transformer : RPC_plastid / RPC2_plastid Source ID : AT4G21990.1 Gene name : AT4G21990.1 Source : AraCyc KEGG ID : AT4G21990 Transformer : APS_reductase / SUL_root Source ID : AT5G08680.1 Gene name : AT5G08680.1 Source : AraCyc KEGG ID : AT5G08680 Transformer : ATP synthase Source ID : AT5G13420.1 Gene name : AT5G13420.1 Source : AraCyc KEGG ID : AT5G13420 Transformer : TA / TA_root Source ID : AT3G62650.2 Gene name : AT3G62650.2 Source : AraCyc Transformer : Tyr / Tyr_root / Phe / Phe_root Source ID : AT3G62650.1 Gene name : AT3G62650.1 Source : AraCyc Transformer : Tyr / Tyr_root / Phe / Phe_root Source ID : AT3G08590.2 Gene name : AT3G08590.2 Source : AraCyc KEGG ID : AT3G08590 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT3G08590.1 Gene name : AT3G08590.1 Source : AraCyc KEGG ID : AT3G08590 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT1G07940.2 Gene name : AT1G07940.2 Source : AraCyc KEGG ID : GQT-793 Transformer : CYS / CYS_root Source ID : AT1G07940.1 Gene name : AT1G07940.1 Source : AraCyc KEGG ID : GQT-793 Transformer : CYS / CYS_root Source ID : AT4G18440.1 Gene name : AT4G18440.1 Source : AraCyc KEGG ID : AT4G18440 Transformer : AICAR / AICAR_root Source ID : AT4G39540.3 Gene name : AT4G39540.3 Source : AraCyc KEGG ID : AT4G39540 Transformer : Chor / Chor_root Source ID : AT2G02860.1 Gene name : AT2G02860.1 Source : AraCyc Transformer : T.Sucrose.root Source ID : AT4G39540.2 Gene name : AT4G39540.2 Source : AraCyc KEGG ID : AT4G39540 Transformer : Chor / Chor_root Source ID : AT3G01610.1 Gene name : AT3G01610.1 Source : AraCyc KEGG ID : AT3G01610 Transformer : UTP / UTP_root Source ID : AT4G39540.1 Gene name : AT4G39540.1 Source : AraCyc KEGG ID : AT4G39540 Transformer : Chor / Chor_root Source ID : AT1G17745.2 Gene name : AT1G17745.2 Source : AraCyc KEGG ID : AT1G17745 Transformer : SER / SER_root Source ID : AT1G17745.1 Gene name : AT1G17745.1 Source : AraCyc KEGG ID : AT1G17745 Transformer : SER / SER_root Source ID : AT5G66120.2 Gene name : AT5G66120.2 Source : AraCyc KEGG ID : AT5G66120 Transformer : Chor / Chor_root Source ID : AT5G66120.1 Gene name : AT5G66120.1 Source : AraCyc KEGG ID : AT5G66120 Transformer : Chor / Chor_root Source ID : AT1G21530.2 Gene name : AT1G21530.2 Source : AraCyc KEGG ID : AT1G21530 Transformer : ILE / ILE_root Source ID : AT1G21530.1 Gene name : AT1G21530.1 Source : AraCyc KEGG ID : AT1G21530 Transformer : ILE / ILE_root Source ID : AT4G35640.1 Gene name : AT4G35640.1 Source : AraCyc KEGG ID : AT4G35640 Transformer : CYS / CYS_root Source ID : AT2G17130.2 Gene name : AT2G17130.2 Source : AraCyc KEGG ID : AT2G17130 Transformer : IDH / IDH_root / IDH_mitochondria / IDH_mitochondria_root Source ID : AT2G17130.1 Gene name : AT2G17130.1 Source : AraCyc KEGG ID : AT2G17130 Transformer : IDH / IDH_root / IDH_mitochondria / IDH_mitochondria_root Source ID : AT2G45290.1 Gene name : AT2G45290.1 Source : AraCyc KEGG ID : AT2G45290 Transformer : TKa / TKa_root / TKa_plastid / TKb / TKb_root / TKb_plastid Source ID : AT5G14060.2 Gene name : AT5G14060.2 Source : AraCyc KEGG ID : AT5G14060 Transformer : Hom / Hom_root Source ID : AT5G14060.1 Gene name : AT5G14060.1 Source : AraCyc KEGG ID : AT5G14060 Transformer : Hom / Hom_root Source ID : AT2G17265.1 Gene name : AT2G17265.1 Source : AraCyc KEGG ID : AT2G17265 Transformer : Thr / Thr_root / MET / MET_root Source ID : AT5G34930.1 Gene name : AT5G34930.1 Source : AraCyc KEGG ID : AT5G34930 Transformer : Tyr / Tyr_root Source ID : AT1G50390.1 Gene name : AT1G50390.1 Source : AraCyc KEGG ID : AT1G50390 Transformer : FK / FK_root Source ID : AT1G48860.2 Gene name : AT1G48860.2 Source : AraCyc KEGG ID : AT1G48860 Transformer : Chor / Chor_root Source ID : AT5G36790.3 Gene name : AT5G36790.3 Source : AraCyc KEGG ID : AT5G36790 Transformer : PGP Source ID : AT1G48860.1 Gene name : AT1G48860.1 Source : AraCyc KEGG ID : AT1G48860 Transformer : Chor / Chor_root Source ID : AT5G36790.2 Gene name : AT5G36790.2 Source : AraCyc KEGG ID : AT5G36790 Transformer : PGP Source ID : AT4G24620.2 Gene name : AT4G24620.2 Source : AraCyc KEGG ID : AT4G24620 Transformer : PGI / PGI_root / PGI_plastid Source ID : AT5G36790.1 Gene name : AT5G36790.1 Source : AraCyc KEGG ID : AT5G36790 Transformer : PGP Source ID : AT5G35630.3 Gene name : AT5G35630.3 Source : AraCyc KEGG ID : AT5G35630 Transformer : GLN / GLN_plastid / GLN_root Source ID : AT4G24620.1 Gene name : AT4G24620.1 Source : AraCyc KEGG ID : AT4G24620 Transformer : PGI / PGI_root / PGI_plastid Source ID : AT5G43780.1 Gene name : AT5G43780.1 Source : AraCyc KEGG ID : AT5G43780 Transformer : APS / SUL_root Source ID : AT3G55010.2 Gene name : AT3G55010.2 Source : AraCyc KEGG ID : AT3G55010 Transformer : AICAR / AICAR_root Source ID : AT5G35630.2 Gene name : AT5G35630.2 Source : AraCyc KEGG ID : AT5G35630 Transformer : GLN / GLN_plastid / GLN_root Source ID : AT3G55010.1 Gene name : AT3G55010.1 Source : AraCyc KEGG ID : AT3G55010 Transformer : AICAR / AICAR_root Source ID : AT2G15620.1 Gene name : AT2G15620.1 Source : AraCyc KEGG ID : AT2G15620 Transformer : NR2 / NR2_root Source ID : AT1G22170.1 Gene name : AT1G22170.1 Source : AraCyc KEGG ID : AT1G22170 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT5G10630.2 Gene name : AT5G10630.2 Source : AraCyc KEGG ID : GQT-785 Transformer : SUL / SUL_root Source ID : AT5G10630.1 Gene name : AT5G10630.1 Source : AraCyc KEGG ID : GQT-785 Transformer : SUL / SUL_root Source ID : AT5G57890.1 Gene name : AT5G57890.1 Source : AraCyc KEGG ID : AT5G57890 Transformer : TRP / TRP_root Source ID : AT5G54810.1 Gene name : AT5G54810.1 Source : AraCyc KEGG ID : AT5G54810 Transformer : TRP / TRP_root Source ID : AT5G45300.2 Gene name : AT5G45300.2 Source : AraCyc KEGG ID : AT5G45300 Transformer : BAM Source ID : AT4G29220.1 Gene name : AT4G29220.1 Source : AraCyc KEGG ID : AT4G29220 Transformer : PFK / PFK_root Source ID : AT5G45300.1 Gene name : AT5G45300.1 Source : AraCyc KEGG ID : AT5G45300 Transformer : BAM Source ID : AT4G10120.2 Gene name : AT4G10120.2 Source : AraCyc KEGG ID : AT4G10120 Transformer : SPS Source ID : AT5G08570.1 Gene name : AT5G08570.1 Source : AraCyc KEGG ID : AT5G08570 Transformer : PK / PK_root Source ID : AT4G10120.1 Gene name : AT4G10120.1 Source : AraCyc KEGG ID : AT4G10120 Transformer : SPS Source ID : AT1G12900.4 Gene name : AT1G12900.4 Source : AraCyc KEGG ID : AT1G12900 Transformer : GAPDH / GAPDH_root / GAPDH_plastid / PRK_plastid Source ID : AT1G12900.3 Gene name : AT1G12900.3 Source : AraCyc KEGG ID : AT1G12900 Transformer : GAPDH_plastid / PRK_plastid Source ID : AT2G45300.1 Gene name : AT2G45300.1 Source : AraCyc KEGG ID : AT2G45300 Transformer : Chor / Chor_root Source ID : AT1G12900.2 Gene name : AT1G12900.2 Source : AraCyc KEGG ID : AT1G12900 Transformer : GAPDH_plastid Source ID : AT1G12900.1 Gene name : AT1G12900.1 Source : AraCyc KEGG ID : AT1G12900 Transformer : GAPDH / GAPDH_root / GAPDH_plastid / PRK_plastid Source ID : AT3G30841.1 Gene name : AT3G30841.1 Source : AraCyc KEGG ID : AT3G30841 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT2G32290.1 Gene name : AT2G32290.1 Source : AraCyc KEGG ID : AT2G32290 Transformer : BAM Source ID : AT1G72190.1 Gene name : AT1G72190.1 Source : AraCyc KEGG ID : AT1G72190 Transformer : HPR Source ID : AT5G61410.2 Gene name : AT5G61410.2 Source : AraCyc KEGG ID : AT5G61410 Transformer : RPE / RPE_root / RPE_plastid Source ID : AT5G61410.1 Gene name : AT5G61410.1 Source : AraCyc KEGG ID : AT5G61410 Transformer : RPE / RPE_root / RPE_plastid Source ID : AT5G50850.1 Gene name : AT5G50850.1 Source : AraCyc KEGG ID : AT5G50850 Transformer : PDH / PDH_root Source ID : AT1G58080.1 Gene name : AT1G58080.1 Source : AraCyc KEGG ID : AT1G58080 Transformer : His / His_root Source ID : AT5G22630.1 Gene name : AT5G22630.1 Source : AraCyc KEGG ID : AT5G22630 Transformer : Phe / Phe_root Source ID : AT3G04120.1 Gene name : AT3G04120.1 Source : AraCyc KEGG ID : AT3G04120 Transformer : GADPH / GAPDH_root Source ID : AT3G60100.1 Gene name : AT3G60100.1 Source : AraCyc KEGG ID : AT3G60100 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT5G50790.1 Gene name : AT5G50790.1 Source : AraCyc Transformer : T.Sucrose.mesophyll Source ID : AT1G14240.4 Gene name : AT1G14240.4 Source : AraCyc KEGG ID : AT1G14240 Transformer : UDP / UDP_root / UTP / UTP_root / CMP / CMP_root Source ID : AT1G14240.3 Gene name : AT1G14240.3 Source : AraCyc KEGG ID : AT1G14240 Transformer : UDP / UDP_root / UTP / UTP_root / CMP / CMP_root Source ID : ATCG00490.1 Gene name : ATCG00490.1 Source : AraCyc KEGG ID : ATCG00490 Transformer : RPC_plastid / RPC2_plastid Source ID : AT1G14240.2 Gene name : AT1G14240.2 Source : AraCyc KEGG ID : AT1G14240 Transformer : UDP / UDP_root / UTP / UTP_root / CMP / CMP_root Source ID : AT1G14240.1 Gene name : AT1G14240.1 Source : AraCyc KEGG ID : AT1G14240 Transformer : UDP / UDP_root / UTP / UTP_root / CMP / CMP_root Source ID : AT3G01850.2 Gene name : AT3G01850.2 Source : AraCyc KEGG ID : AT3G01850 Transformer : RPE / RPE_root / RPE_plastid Source ID : AT3G01850.1 Gene name : AT3G01850.1 Source : AraCyc KEGG ID : AT3G01850 Transformer : RPE / RPE_root / RPE_plastid Source ID : AT5G63680.1 Gene name : AT5G63680.1 Source : AraCyc KEGG ID : AT5G63680 Transformer : PK / PK_root Source ID : AT2G05710.1 Gene name : AT2G05710.1 Source : AraCyc KEGG ID : AT2G05710 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT4G24450.1 Gene name : AT4G24450.1 Source : AraCyc KEGG ID : AT4G24450 Transformer : SK Source ID : AT3G13110.1 Gene name : AT3G13110.1 Source : AraCyc KEGG ID : AT3G13110 Transformer : CYS / CYS_root Source ID : AT4G26900.1 Gene name : AT4G26900.1 Source : AraCyc KEGG ID : AT4G26900 Transformer : His / His_root Source ID : AT5G50800.1 Gene name : AT5G50800.1 Source : AraCyc Transformer : T.Sucrose.mesophyll Source ID : AT1G06030.1 Gene name : AT1G06030.1 Source : AraCyc KEGG ID : AT1G06030 Transformer : FK / FK_root Source ID : AT2G29560.1 Gene name : AT2G29560.1 Source : AraCyc KEGG ID : AT2G29560 Transformer : ENO / ENO_root Source ID : AT5G64380.1 Gene name : AT5G64380.1 Source : AraCyc KEGG ID : AT5G64380 Transformer : FBP / FBP_root / FBP_plastid Source ID : AT1G78900.2 Gene name : AT1G78900.2 Source : AraCyc KEGG ID : AT1G78900 Transformer : ATP synthase Source ID : AT1G78900.1 Gene name : AT1G78900.1 Source : AraCyc KEGG ID : AT1G78900 Transformer : ATP synthase Source ID : AT5G18670.1 Gene name : AT5G18670.1 Source : AraCyc KEGG ID : AT5G18670 Transformer : BAM Source ID : AT4G27070.1 Gene name : AT4G27070.1 Source : AraCyc KEGG ID : AT4G27070 Transformer : TRP / TRP_root Source ID : AT3G04940.1 Gene name : AT3G04940.1 Source : AraCyc KEGG ID : AT3G04940 Transformer : CYS / CYS_root Source ID : AT3G03250.1 Gene name : AT3G03250.1 Source : AraCyc KEGG ID : AT3G03250 Transformer : UGP / UGP_root Source ID : AT2G37250.1 Gene name : AT2G37250.1 Source : AraCyc KEGG ID : AT2G37250 Transformer : AT2G37250.1 Source ID : AT5G10870.1 Gene name : AT5G10870.1 Source : AraCyc KEGG ID : AT5G10870 Transformer : Tyr / Tyr_root / Phe / Phe_root Source ID : AT4G38970.2 Gene name : AT4G38970.2 Source : AraCyc KEGG ID : AT4G38970 Transformer : Aldo_plastid Source ID : AT4G38970.1 Gene name : AT4G38970.1 Source : AraCyc KEGG ID : AT4G38970 Transformer : Aldo_plastid Source ID : AT5G05730.2 Gene name : AT5G05730.2 Source : AraCyc KEGG ID : AT5G05730 Transformer : TRP / TRP_root Source ID : AT4G34200.1 Gene name : AT4G34200.1 Source : AraCyc KEGG ID : AT4G34200 Transformer : SER / SER_root Source ID : AT5G05730.1 Gene name : AT5G05730.1 Source : AraCyc KEGG ID : AT5G05730 Transformer : TRP / TRP_root Source ID : AT2G43090.1 Gene name : AT2G43090.1 Source : AraCyc KEGG ID : AT2G43090 Transformer : Leu / Leu_root Source ID : AT5G48220.1 Gene name : AT5G48220.1 Source : AraCyc KEGG ID : AT5G48220 Transformer : TRP / TRP_root Source ID : AT5G17920.2 Gene name : AT5G17920.2 Source : AraCyc KEGG ID : AT5G17920 Transformer : MET / MET_root Source ID : AT4G35830.2 Gene name : AT4G35830.2 Source : AraCyc KEGG ID : AT4G35830 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT4G35830.1 Gene name : AT4G35830.1 Source : AraCyc KEGG ID : AT4G35830 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT1G18500.1 Gene name : AT1G18500.1 Source : AraCyc KEGG ID : AT1G18500 Transformer : Leu / Leu_root Source ID : AT3G13930.1 Gene name : AT3G13930.1 Source : AraCyc KEGG ID : AT3G13930 Transformer : PDH / PDH_root Source ID : AT5G03690.2 Gene name : AT5G03690.2 Source : AraCyc KEGG ID : AT5G03690 Transformer : Aldo / Aldo_root / Aldo_plastid Source ID : AT5G03690.1 Gene name : AT5G03690.1 Source : AraCyc KEGG ID : AT5G03690 Transformer : Aldo / Aldo_root / Aldo_plastid Source ID : AT3G29360.2 Gene name : AT3G29360.2 Source : AraCyc KEGG ID : AT3G29360 Transformer : UGD / UGD_root Source ID : AT3G29360.1 Gene name : AT3G29360.1 Source : AraCyc KEGG ID : AT3G29360 Transformer : UGD / UGD_root Source ID : AT5G11110.1 Gene name : AT5G11110.1 Source : AraCyc KEGG ID : AT5G11110 Transformer : SPS Source ID : AT4G39210.1 Gene name : AT4G39210.1 Source : AraCyc KEGG ID : AT4G39210 Transformer : ADG_plastid Source ID : AT3G59970.3 Gene name : AT3G59970.3 Source : AraCyc KEGG ID : AT3G59970 Transformer : MTHFR / MTHFR_root Source ID : AT3G59970.2 Gene name : AT3G59970.2 Source : AraCyc KEGG ID : AT3G59970 Transformer : MTHFR / MTHFR_root Source ID : AT3G59970.1 Gene name : AT3G59970.1 Source : AraCyc KEGG ID : AT3G59970 Transformer : MTHFR / MTHFR_root Source ID : AT1G10700.1 Gene name : AT1G10700.1 Source : AraCyc KEGG ID : AT1G10700 Transformer : AT1G10700.1 Source ID : AT2G13360.1 Gene name : AT2G13360.1 Source : AraCyc KEGG ID : AGT1 Transformer : GAT / AGT Source ID : AT1G24280.1 Gene name : AT1G24280.1 Source : AraCyc KEGG ID : AT1G24280 Transformer : G6PDH / G6PDH_root Source ID : AT1G29410.2 Gene name : AT1G29410.2 Source : AraCyc KEGG ID : AT1G29410 Transformer : TRP / TRP_root Source ID : AT2G39060.1 Gene name : AT2G39060.1 Source : AraCyc Transformer : T.Sucrose.mesophyll Source ID : AT3G58750.1 Gene name : AT3G58750.1 Source : AraCyc KEGG ID : AT3G58750 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT1G04410.1 Gene name : AT1G04410.1 Source : AraCyc KEGG ID : AT1G04410 Transformer : MDH / MDH_root / MDH_mitochondria / MDH_mitochondria_root Source ID : AT1G08250.1 Gene name : AT1G08250.1 Source : AraCyc KEGG ID : AT1G08250 Transformer : Phe / Phe_root Source ID : AT3G45940.1 Gene name : AT3G45940.1 Source : AraCyc KEGG ID : AT3G45940 Transformer : MH Source ID : AT3G60750.2 Gene name : AT3G60750.2 Source : AraCyc KEGG ID : AT3G60750 Transformer : TKa / TKa_root / TKa_plastid / TKb / TKb_root / TKb_plastid Source ID : AT1G35580.1 Gene name : AT1G35580.1 Source : AraCyc KEGG ID : AT1G35580 Transformer : FF / FF_root Source ID : AT3G52930.1 Gene name : AT3G52930.1 Source : AraCyc KEGG ID : AT3G52930 Transformer : Aldo / Aldo_root / Aldo_plastid Source ID : AT3G60750.1 Gene name : AT3G60750.1 Source : AraCyc KEGG ID : AT3G60750 Transformer : TKa / TKa_root / TKa_plastid / TKb / TKb_root / TKb_plastid Source ID : AT5G55700.2 Gene name : AT5G55700.2 Source : AraCyc KEGG ID : AT5G55700 Transformer : BAM Source ID : AT5G55700.1 Gene name : AT5G55700.1 Source : AraCyc KEGG ID : AT5G55700 Transformer : BAM Source ID : AT5G14200.3 Gene name : AT5G14200.3 Source : AraCyc KEGG ID : AT5G14200 Transformer : Leu / Leu_root Source ID : AT5G14200.2 Gene name : AT5G14200.2 Source : AraCyc KEGG ID : AT5G14200 Transformer : Leu / Leu_root Source ID : AT2G21590.2 Gene name : AT2G21590.2 Source : AraCyc KEGG ID : AT2G21590 Transformer : ADG_plastid Source ID : AT5G14200.1 Gene name : AT5G14200.1 Source : AraCyc KEGG ID : AT5G14200 Transformer : Leu / Leu_root Source ID : AT2G21590.1 Gene name : AT2G21590.1 Source : AraCyc KEGG ID : AT2G21590 Transformer : ADG_plastid Source ID : AT3G55610.2 Gene name : AT3G55610.2 Source : AraCyc KEGG ID : AT3G55610 Transformer : PRO / PRO_root Source ID : AT5G08300.1 Gene name : AT5G08300.1 Source : AraCyc KEGG ID : AT5G08300 Transformer : SCL / SCL_root Source ID : AT3G55610.1 Gene name : AT3G55610.1 Source : AraCyc KEGG ID : AT3G55610 Transformer : PRO / PRO_root Source ID : AT2G47485.1 Gene name : AT2G47485.1 Source : AraCyc Transformer : Tyr / Tyr_root / Phe / Phe_root Source ID : AT1G15710.1 Gene name : AT1G15710.1 Source : AraCyc KEGG ID : AT1G15710 Transformer : Tyr / Tyr_root Source ID : AT1G24807.1 Gene name : AT1G24807.1 Source : AraCyc KEGG ID : AT1G24807 Transformer : TRP / TRP_root Source ID : AT1G80600.1 Gene name : AT1G80600.1 Source : AraCyc KEGG ID : AT1G80600 Transformer : Orni / Orni_root Source ID : AT1G32440.1 Gene name : AT1G32440.1 Source : AraCyc KEGG ID : AT1G32440 Transformer : PK / PK_root Source ID : AT3G44720.1 Gene name : AT3G44720.1 Source : AraCyc KEGG ID : AT3G44720 Transformer : Phe / Phe_root Source ID : AT1G36280.2 Gene name : AT1G36280.2 Source : AraCyc KEGG ID : AT1G36280 Transformer : AICAR / AICAR_root Source ID : AT1G36280.1 Gene name : AT1G36280.1 Source : AraCyc KEGG ID : AT1G36280 Transformer : AICAR / AICAR_root Source ID : AT3G48560.1 Gene name : AT3G48560.1 Source : AraCyc KEGG ID : AT3G48560 Transformer : ILE / ILE_root / VAL / VAL_root / PMet / PMet_root Source ID : AT5G23050.1 Gene name : AT5G23050.1 Source : AraCyc KEGG ID : AT5G23050 Transformer : ACOL / ACOL_root Source ID : AT1G09420.2 Gene name : AT1G09420.2 Source : AraCyc KEGG ID : AT1G09420 Transformer : G6PDH / G6PDH_root Source ID : AT1G32380.1 Gene name : AT1G32380.1 Source : AraCyc KEGG ID : AT1G32380 Transformer : AT1G32380.1 Source ID : AT1G09420.1 Gene name : AT1G09420.1 Source : AraCyc KEGG ID : AT1G09420 Transformer : G6PDH / G6PDH_root Source ID : AT5G47760.1 Gene name : AT5G47760.1 Source : AraCyc KEGG ID : AT5G47760 Transformer : PGP Source ID : AT1G31220.1 Gene name : AT1G31220.1 Source : AraCyc KEGG ID : AT1G31220 Transformer : AICAR / AICAR_root Source ID : AT2G07732.1 Gene name : AT2G07732.1 Source : AraCyc KEGG ID : AT2G07732 Transformer : RPC_plastid Source ID : AT1G10060.3 Gene name : AT1G10060.3 Source : AraCyc KEGG ID : AT1G10060 Transformer : Leu / Leu_root / VAL / VAL_root Source ID : AT1G10060.2 Gene name : AT1G10060.2 Source : AraCyc KEGG ID : AT1G10060 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT1G10060.1 Gene name : AT1G10060.1 Source : AraCyc KEGG ID : AT1G10060 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT4G33680.1 Gene name : AT4G33680.1 Source : AraCyc KEGG ID : AT4G33680 Transformer : Lys / Lys_root Source ID : AT4G32520.2 Gene name : AT4G32520.2 Source : AraCyc KEGG ID : AT4G32520 Transformer : GHMT / GHMT_root Source ID : AT4G32520.1 Gene name : AT4G32520.1 Source : AraCyc KEGG ID : AT4G32520 Transformer : GHMT / GHMT_root Source ID : AT1G16350.1 Gene name : AT1G16350.1 Source : AraCyc KEGG ID : AT1G16350 Transformer : GMP / GMP_root Source ID : AT1G66430.1 Gene name : AT1G66430.1 Source : AraCyc KEGG ID : AT1G66430 Transformer : FK / FK_root Source ID : AT4G16155.1 Gene name : AT4G16155.1 Source : AraCyc KEGG ID : AT4G16155 Transformer : PDH / PDH_root / Suc-CoA / Suc-CoA_root / AT Source ID : AT3G47810.3 Gene name : AT3G47810.3 Source : AraCyc Transformer : SER / SER_root Source ID : AT3G47810.2 Gene name : AT3G47810.1 Source : AraCyc Transformer : SER / SER_root Source ID : AT1G01090.1 Gene name : AT1G01090.1 Source : AraCyc KEGG ID : AT1G01090 Transformer : PDH / PDH_root Source ID : AT3G54270.1 Gene name : AT3G54270.1 Source : AraCyc KEGG ID : AT3G54270 Transformer : SPP Source ID : AT3G47810.1 Gene name : AT3G47810.1 Source : AraCyc Transformer : SER / SER_root Source ID : AT3G16910.1 Gene name : AT3G16910.1 Source : AraCyc KEGG ID : AT3G16910 Transformer : ACOL / ACOL_root Source ID : AT1G09830.1 Gene name : AT1G09830.1 Source : AraCyc KEGG ID : AT1G09830 Transformer : AICAR / AICAR_root Source ID : AT3G27740.1 Gene name : AT3G27740.1 Source : AraCyc KEGG ID : AT3G27740 Transformer : AT3G27740.1 Source ID : AT2G01140.1 Gene name : AT2G01140.1 Source : AraCyc KEGG ID : AT2G01140 Transformer : Aldo / Aldo_root / Also_plastid Source ID : AT2G37500.2 Gene name : AT2G37500.2 Source : AraCyc KEGG ID : AT2G37500 Transformer : Orni / Orni_root Source ID : AT2G37500.1 Gene name : AT2G37500.1 Source : AraCyc KEGG ID : AT2G37500 Transformer : Orni / Orni_root Source ID : ATMG00280.1 Gene name : ATMG00280.1 Source : AraCyc KEGG ID : ATMG00280 Transformer : RPC_plastid / RPC2_plastid Source ID : AT1G70820.1 Gene name : AT1G70820.1 Source : AraCyc KEGG ID : AT1G70820 Transformer : PGM3 / PGM3_root / PGM3_plastid Source ID : AT2G29690.1 Gene name : AT2G29690.1 Source : AraCyc KEGG ID : AT2G29690 Transformer : TRP / TRP_root Source ID : AT3G29200.1 Gene name : AT3G29200.1 Source : AraCyc KEGG ID : AT3G29200 Transformer : Tyr / Tyr_root / Phe / Phe_root Source ID : AT3G55440.1 Gene name : AT3G55440.1 Source : AraCyc KEGG ID : AT3G55440 Transformer : TPI / TPI_root Source ID : AT4G26970.1 Gene name : AT4G26970.1 Source : AraCyc KEGG ID : AT4G26970 Transformer : CIS / CIS_mitochondria / CIS_root / CIS_mitochondria_root Source ID : AT4G15210.2 Gene name : AT4G15210.2 Source : AraCyc KEGG ID : AT4G15210 Transformer : BAM Source ID : AT4G25280.1 Gene name : AT4G25280.1 Source : AraCyc KEGG ID : AT4G25280 Transformer : AT4G25280.1 Source ID : AT4G15210.1 Gene name : AT4G15210.1 Source : AraCyc KEGG ID : AT4G15210 Transformer : BAM Source ID : AT3G22425.2 Gene name : AT3G22425.2 Source : AraCyc KEGG ID : AT3G22425 Transformer : His / His_root Source ID : AT3G22425.1 Gene name : AT3G22425.1 Source : AraCyc KEGG ID : AT3G22425 Transformer : His / His_root Source ID : AT3G03910.1 Gene name : AT3G03910.1 Source : AraCyc KEGG ID : AT3G03910 Transformer : GDH / GDH_root Source ID : AT3G23920.1 Gene name : AT3G23920.1 Source : AraCyc KEGG ID : AT3G23920 Transformer : BAM Source ID : AT1G30820.1 Gene name : AT1G30820.1 Source : AraCyc KEGG ID : AT1G30820 Transformer : AT1G30820.1 Source ID : AT2G43750.2 Gene name : AT2G43750.2 Source : AraCyc KEGG ID : AT2G43750 Transformer : CYS / CYS_root Source ID : AT2G43750.1 Gene name : AT2G43750.1 Source : AraCyc KEGG ID : AT2G43750 Transformer : CYS / CYS_root Source ID : AT3G04080.1 Gene name : AT3G04080.1 Source : AraCyc KEGG ID : AT3G04080 Transformer : UTP / UTP_root Source ID : AT5G18280.2 Gene name : AT5G18280.2 Source : AraCyc KEGG ID : AT5G18280 Transformer : UTP / UTP_root Source ID : AT5G18280.1 Gene name : AT5G18280.1 Source : AraCyc KEGG ID : AT5G18280 Transformer : UTP / UTP_root Source ID : AT4G29130.1 Gene name : AT4G29130.1 Source : AraCyc KEGG ID : AT4G29130 Transformer : GLK / GLK_root FK / FK_root Source ID : AT5G17990.1 Gene name : AT5G17990.1 Source : AraCyc KEGG ID : AT5G17990 Transformer : TRP / TRP_root Source ID : AT3G52180.1 Gene name : AT3G52180.1 Source : AraCyc KEGG ID : AT3G52180 Transformer : BAM Source ID : AT4G26390.1 Gene name : AT4G26390.1 Source : AraCyc KEGG ID : AT4G26390 Transformer : PK / PK_root Source ID : AT4G34740.1 Gene name : AT4G34740.1 Source : AraCyc KEGG ID : AT4G34740 Transformer : AICAR / AICAR_root Source ID : AT1G23310.1 Gene name : AT1G23310.1 Source : AraCyc KEGG ID : AT1G23310 Transformer : GAT Source ID : AT1G09795.1 Gene name : AT1G09795.1 Source : AraCyc KEGG ID : AT1G09795 Transformer : His / His_root Source ID : AT5G17530.3 Gene name : AT5G17530.3 Source : AraCyc KEGG ID : AT5G17530 Transformer : PGM3 / PGM3_root / PGM_plastid Source ID : AT5G17530.2 Gene name : AT5G17530.2 Source : AraCyc KEGG ID : AT5G17530 Transformer : PGM3 / PGM3_root / PGM_plastid Source ID : AT5G17530.1 Gene name : AT5G17530.1 Source : AraCyc KEGG ID : AT5G17530 Transformer : PGM3 / PGM3_root / PGM_plastid Source ID : AT1G24909.1 Gene name : AT1G24909.1 Source : AraCyc KEGG ID : AT1G24909 Transformer : TRP / TRP_root Source ID : AT2G07707.1 Gene name : AT2G07707.1 Source : AraCyc KEGG ID : AT2G07707 Transformer : ATP synthase Source ID : AT2G34590.1 Gene name : AT2G34590.1 Source : AraCyc KEGG ID : AT2G34590 Transformer : PDH / PDH_root Source ID : AT3G12780.1 Gene name : AT3G12780.1 Source : AraCyc KEGG ID : AT3G12780 Transformer : PGK / PGK_root / PGK_Plastid Source ID : AT5G04120.1 Gene name : AT5G04120.1 Source : AraCyc KEGG ID : AT5G04120 Transformer : PGM / PGM_root / PGM_plastid Source ID : AT5G49460.1 Gene name : AT5G49460.1 Source : AraCyc KEGG ID : AT5G49460 Transformer : ACL Source ID : AT3G05190.1 Gene name : AT3G05190.1 Source : AraCyc KEGG ID : GQT-502 Transformer : ILE / ILE_root / Leu / Leu_root / VAL / VAL_root Source ID : AT5G48300.1 Gene name : AT5G48300.1 Source : AraCyc KEGG ID : AT5G48300 Transformer : ADG_plastid Source ID : AT3G55800.1 Gene name : AT3G55800.1 Source : AraCyc KEGG ID : AT3G55800 Transformer : SBP_plastid Source ID : AT5G23300.1 Gene name : AT5G23300.1 Source : AraCyc KEGG ID : AT5G23300 Transformer : UMP / UMP_root Source ID : AT1G23190.1 Gene name : AT1G23190.1 Source : AraCyc KEGG ID : AT1G23190 Transformer : PGM3 / PGM3_root / PGM_plastid Source ID : AT3G01820.1 Gene name : AT3G01820.1 Source : AraCyc KEGG ID : AT3G01820 Transformer : AT3G01820.1 Source ID : AT5G15490.1 Gene name : AT5G15490.1 Source : AraCyc KEGG ID : AT5G15490 Transformer : UGD / UGD_root Source ID : AT1G74030.1 Gene name : AT1G74030.1 Source : AraCyc KEGG ID : AT1G74030 Transformer : ENO / ENO_root Source ID : AT3G54050.2 Gene name : AT3G54050.2 Source : AraCyc KEGG ID : AT3G54050 Transformer : FBP / FBP_root / FBP_plastid Source ID : AT3G54050.1 Gene name : AT3G54050.1 Source : AraCyc KEGG ID : AT3G54050 Transformer : FBP_plastid Source ID : AT5G18170.1 Gene name : AT5G18170.1 Source : AraCyc KEGG ID : AT5G18170 Transformer : GDH / GDH_root Source ID : AT2G22480.1 Gene name : AT2G22480.1 Source : AraCyc KEGG ID : AT2G22480 Transformer : PFK / PFK_root Source ID : AT1G12230.2 Gene name : AT1G12230.2 Source : AraCyc KEGG ID : AT1G12230 Transformer : TA / TA_root Source ID : AT1G12230.1 Gene name : AT1G12230.1 Source : AraCyc KEGG ID : AT1G12230 Transformer : TA / TA_root Source ID : AT1G55320.2 Gene name : AT1G55320.2 Source : AraCyc KEGG ID : AT1G55320 Transformer : ACOL / ACOL_root Source ID : AT2G31390.1 Gene name : AT2G31390.1 Source : AraCyc KEGG ID : AT2G31390 Transformer : FK / FK_root Source ID : AT1G55320.1 Gene name : AT1G55320.1 Source : AraCyc KEGG ID : AT1G55320 Transformer : ACOL / ACOL_root Source ID : AT5G14800.2 Gene name : AT5G14800.2 Source : AraCyc KEGG ID : AT5G14800 Transformer : PRO / PRO_root Source ID : AT3G52600.2 Gene name : AT3G52600.2 Source : AraCyc KEGG ID : AT3G52600 Transformer : FF / FF_root Source ID : AT5G14800.1 Gene name : AT5G14800.1 Source : AraCyc KEGG ID : AT5G14800 Transformer : PRO / PRO_root Source ID : AT3G52600.1 Gene name : AT3G52600.1 Source : AraCyc KEGG ID : AT3G52600 Transformer : FF / FF_root Source ID : AT5G13110.1 Gene name : AT5G13110.1 Source : AraCyc KEGG ID : AT5G13110 Transformer : G6PDH / G6PDH_root Source ID : AT1G51420.1 Gene name : AT1G51420.1 Source : AraCyc KEGG ID : AT1G51420 Transformer : SPP Source ID : AT5G66005.3 Gene name : AT5G66005.3 Source : AraCyc KEGG ID : AT5G66005 Transformer : UTP / UTP_root Source ID : AT5G66005.2 Gene name : AT5G66005.2 Source : AraCyc KEGG ID : AT5G66005 Transformer : UTP / UTP_root Source ID : AT2G36460.2 Gene name : AT2G36460.2 Source : AraCyc KEGG ID : AT2G36460 Transformer : Aldo / Aldo_root / Aldo_plastid Source ID : AT2G36460.1 Gene name : AT2G36460.1 Source : AraCyc KEGG ID : AT2G36460 Transformer : Aldo / Aldo_root / Aldo_plastid Source ID : AT1G77120.1 Gene name : AT1G77120.1 Source : AraCyc KEGG ID : AT1G77120 Transformer : UGD / UGD_root Source ID : AT4G24830.2 Gene name : AT4G24830.2 Source : AraCyc KEGG ID : AT4G24830 Transformer : ARG / ARG_root Source ID : AT4G24830.1 Gene name : AT4G24830.1 Source : AraCyc KEGG ID : AT4G24830 Transformer : ARG / ARG_root Source ID : AT2G04400.1 Gene name : AT2G04400.1 Source : AraCyc KEGG ID : AT2G04400 Transformer : TRP / TRP_root Source ID : AT5G24410.1 Gene name : AT5G24410.1 Source : AraCyc KEGG ID : AT5G24410 Transformer : PGL / PGL_root Source ID : AT5G60390.3 Gene name : AT5G60390.3 Source : AraCyc KEGG ID : GQT-33 Transformer : CYS / CYS_root Source ID : AT5G60390.2 Gene name : AT5G60390.2 Source : AraCyc KEGG ID : GQT-33 Transformer : CYS / CYS_root Source ID : AT5G60390.1 Gene name : AT5G60390.1 Source : AraCyc KEGG ID : GQT-33 Transformer : CYS / CYS_root Source ID : AT3G12670.1 Gene name : AT3G12670.1 Source : AraCyc KEGG ID : AT3G12670 Transformer : AT3G12670.1 -------------------- BALANCED COMPOUNDS -------------------- 1,3-bisphospho-D-Glycerate mesophyll 1,3-bisphospho-D-Glycerate plastid 1,3-bisphospho-D-Glycerate root 2-Oxoglutarate mesophyll 2-Oxoglutarate root 2-Oxoglutarate plastid 2-Oxoglutarate Mitochondria_mesophyll 2-Oxoglutarate Mitochondria_root 2-Oxoglutarate_tmp plant 2-Oxoglutarate_tmp2 plant 2-Oxoglutarate_tmp3 plant 3-Hydroxypyruvate mesophyll 3-Methyl-2-oxobutanoate mesophyll 3-Methyl-2-oxobutanoate root 5,10-Methylenetetrahydrofolate mesophyll 5,10-Methylenetetrahydrofolate root 5-Formyltetrahydrofolate mesophyll 5-Formyltetrahydrofolate root 5-Methyltetrahydrofolate mesophyll 5-Methyltetrahydrofolate root 6-Phosphogluco-amylopectin plastid 6-phospho-D-Gluconate mesophyll 6-phospho-D-Gluconate plastid 6-phospho-D-Gluconate root ADP mesophyll ADP root ADP plastid ADP phloem ADP Mitochondria_mesophyll ADP Mitochondria_root ADP-Glucose plastid ADP_tmp plant ADP_tmp2 plant ADP_tmp3 plant AICAR mesophyll AICAR root AMP mesophyll AMP root AMP plastid APS plastid ATP mesophyll ATP root ATP plastid ATP phloem ATP Mitochondria_mesophyll ATP Mitochondria_root ATP_tmp plant ATP_tmp2 plant ATP_tmp3 plant Acetate mesophyll Acetate root Acetyl-CoA mesophyll Acetyl-CoA root Acetyl-CoA Mitochondria_mesophyll Acetyl-CoA Mitochondria_root Biomass_mesophyll plant Biomass_mesophyll mesophyll Biomass_plant plant Biomass_root plant Biomass_root root CMP mesophyll CMP root CO2 mesophyll CO2 root CO2 Mitochondria_mesophyll CO2 Mitochondria_root CO2 phloem CO2 plastid CO2 plant CO2_tmp plant CO2_tmp2 plant CO2_tmp3 plant CTP mesophyll CTP root Carbamoyl_phosphate mesophyll Carbamoyl_phosphate root Carbon_inorg mesophyll Carbon_inorg root Cellulose mesophyll Cellulose root Chorismate mesophyll Chorismate root CoA mesophyll CoA root CoA Mitochondria_mesophyll CoA Mitochondria_root CoQ phloem CoQH2 phloem CoQH2_Mitochondria mesophyll CoQH2_Mitochondria root CoQ_Mitochondria mesophyll CoQ_Mitochondria root Cyt_ox phloem Cyt_red phloem Cytochrom_c_ox_Mitochondria mesophyll Cytochrom_c_ox_Mitochondria root Cytochrom_c_red_Mitochondria mesophyll Cytochrom_c_red_Mitochondria root D-Erythrose_4-phosphate plastid D-Erythrose_4-phosphate mesophyll D-Erythrose_4-phosphate root D-Fructose_1,6-bisphosphate mesophyll D-Fructose_1,6-bisphosphate plastid D-Fructose_1,6-bisphosphate root D-Fructose_6-phosphate mesophyll D-Fructose_6-phosphate plastid D-Fructose_6-phosphate root D-Glucono-1,5-lactone_6-phosphate mesophyll D-Glucono-1,5-lactone_6-phosphate plastid D-Glucono-1,5-lactone_6-phosphate root D-Glucose root D-Glucose mesophyll D-Glucose_1-phosphate plastid D-Glucose_1-phosphate mesophyll D-Glucose_1-phosphate root D-Glucose_6-phosphate mesophyll D-Glucose_6-phosphate plastid D-Glucose_6-phosphate root D-Glyceraldehyde_3-phosphate mesophyll D-Glyceraldehyde_3-phosphate plastid D-Glyceraldehyde_3-phosphate root D-Glyceraldehyde_3-phosphate_tmp plant D-Glycerate plastid D-Glycerate mesophyll D-Glycerate plant D-Glycerate_2-phosphate mesophyll D-Glycerate_2-phosphate root D-Glycerate_3-phosphate plastid D-Glycerate_3-phosphate mesophyll D-Glycerate_3-phosphate root D-Ribose_5-phosphate mesophyll D-Ribose_5-phosphate plastid D-Ribose_5-phosphate root D-Ribulose_1,5-bisphosphate plastid D-Ribulose_5-phosphate mesophyll D-Ribulose_5-phosphate plastid D-Ribulose_5-phosphate root D-Sedoheptulose_7-phosphate plastid D-Sedoheptulose_7-phosphate mesophyll D-Sedoheptulose_7-phosphate root D-Xylulose_5-phosphate mesophyll D-Xylulose_5-phosphate plastid D-Xylulose_5-phosphate root Fd_ox plastid Fd_red plastid Fumarate mesophyll Fumarate root Fumarate Mitochondria_mesophyll Fumarate Mitochondria_root Fumarate phloem Fumarate_tmp plant Fumarate_tmp2 plant GMP mesophyll GMP root Glycerol mesophyll Glycerol root Glycerone-phosphate plastid Glycerone-phosphate mesophyll Glycerone-phosphate root Glycine mesophyll Glycine root Glycolate mesophyll Glycolate plastid Glycolate plant Glyoxylate mesophyll H2O mesophyll H2O root H2O plastid H2O Mitochondria_mesophyll H2O Mitochondria_root H2O phloem H2O plant H2O2 mesophyll H2O_tmp plant H2O_tmp2 plant H2O_tmp3 plant H2O_tmp4 plant H2O_tmp5 plant H2O_tmp6 plant H2S mesophyll H2S root H2S plastid H2S_tmp plant H_in phloem H_in_tmp plant H_in_tmp2 plant H_in_tmp3 plant Hexadecanoate mesophyll Hexadecanoate root IMP mesophyll IMP root Isocitrate mesophyll Isocitrate root Isocitrate Mitochondria_mesophyll Isocitrate Mitochondria_root Isocitrate_tmp plant Isocitrate_tmp2 plant L-Alanine mesophyll L-Alanine root L-Arginine mesophyll L-Arginine root L-Asparagine mesophyll L-Asparagine root L-Aspartate mesophyll L-Aspartate root L-Cysteine mesophyll L-Cysteine root L-Glutamate mesophyll L-Glutamate root L-Glutamate plastid L-Glutamate_tmp plant L-Glutamine mesophyll L-Glutamine root L-Glutamine plastid L-Glutamine_tmp plant L-Histidine mesophyll L-Histidine root L-Homoserine mesophyll L-Homoserine root L-Isoleucine mesophyll L-Isoleucine root L-Leucine mesophyll L-Leucine root L-Lysine mesophyll L-Lysine root L-Malate Mitochondria_mesophyll L-Malate Mitochondria_root L-Malate mesophyll L-Malate root L-Malate plastid L-Malate_tmp plant L-Malate_tmp2 plant L-Malate_tmp3 plant L-Methionine mesophyll L-Methionine root L-Ornithine mesophyll L-Ornithine root L-Phenylalanine mesophyll L-Phenylalanine root L-Proline mesophyll L-Proline root L-Serine mesophyll L-Serine root L-Threonine mesophyll L-Threonine root L-Tryptophan mesophyll L-Tryptophan root L-Tyrosine mesophyll L-Tyrosine root L-Valine mesophyll L-Valine root Linoleate mesophyll Linoleate root Lipid mesophyll Lipid root NAD mesophyll NAD root NAD Mitochondria_mesophyll NAD Mitochondria_root NAD phloem NADH mesophyll NADH root NADH Mitochondria_mesophyll NADH Mitochondria_root NADH phloem NADP plastid NADP mesophyll NADP root NADPH plastid NADPH mesophyll NADPH root NH4 mesophyll NH4 root NH4 plastid NH4 plant Nitrate mesophyll Nitrate root Nitrate plant Nitrate phloem Nitrate_tmp2 plant Nitrate_tmp3 plant Nitrite mesophyll Nitrite root Nitrite plastid Nitrite_tmp plant Nitrogen_inorg mesophyll Nitrogen_inorg root O2 mesophyll O2 root O2 phloem O2 plastid O2 plant O2_Mitochondria mesophyll O2_Mitochondria root O2_tmp plant O2_tmp2 plant O2_tmp3 plant OH mesophyll OH Mitochondria_root OH phloem OH root Octadecanoate mesophyll Octadecanoate root Orthophosphate mesophyll Orthophosphate root Orthophosphate plastid Orthophosphate phloem Orthophosphate Mitochondria_mesophyll Orthophosphate Mitochondria_root Orthophosphate plant Orthophosphate_tmp plant Orthophosphate_tmp2 plant Orthophosphate_tmp3 plant Orthophosphate_tmp4 plant Orthophosphate_tmp5 plant Oxaloacetate mesophyll Oxaloacetate root Oxaloacetate Mitochondria_mesophyll Oxaloacetate Mitochondria_root Oxaloacetate plastid Oxaloacetate_tmp plant Oxaloacetate_tmp2 plant Oxaloacetate_tmp3 plant PC_ox plastid PC_red plastid PRPP mesophyll PRPP root Phosphoenolpyruvate mesophyll Phosphoenolpyruvate root Phosphoglycolate plastid Phosphorus_inorg mesophyll Phosphorus_inorg root Plastoquinol plastid Plastoquinone plastid Protein mesophyll Protein root Pyruvate mesophyll Pyruvate root Pyruvate phloem Pyruvate Mitochondria_mesophyll Pyruvate Mitochondria_root Pyruvate_tmp plant Pyruvate_tmp2 plant RNA mesophyll RNA root Sedoheptulose_1,7-bisphosphate plastid Starch plastid Starch plant Starch mesophyll Starch_tmp plant Succinate phloem Succinate Mitochondria_mesophyll Succinate Mitochondria_root Succinyl-CoA Mitochondria_mesophyll Succinyl-CoA Mitochondria_root Sucrose root Sucrose mesophyll Sucrose phloem Sucrose plant Sucrose_6-phosphate mesophyll Sucrose_tmp plant Sucrose_vac mesophyll Sucrose_vac root Sulfate plastid Sulfate root Sulfate mesophyll Sulfate plant Sulfate phloem Sulfate_tmp plant Sulfate_tmp2 plant Sulfate_tmp3 plant Sulfite plastid Sulfur_inorg mesophyll Sulfur_inorg root Tetrahydrofolate mesophyll Tetrahydrofolate root UDP mesophyll UDP root UDP-Glucose mesophyll UDP-Glucose root UDP-Glucuronate mesophyll UDP-Glucuronate root UMP mesophyll UMP root UTP mesophyll UTP root alpha-Maltose plastid alpha-Maltose mesophyll alpha-Maltose_tmp plant ash mesophyll ash root beta-D-Fructofuranose root cis-Hexadecenoate mesophyll cis-Hexadecenoate root cis-Octadecenoate mesophyll cis-Octadecenoate root h mesophyll h root h plastid h Mitochondria_mesophyll h Mitochondria_root h phloem h_tmp plant h_tmp2 plant h_tmp3 plant h_tmp4 plant h_tmp5 plant h_tmp6 plant hv plant pectin mesophyll pectin root sn-Glycerol_3-phosphate mesophyll sn-Glycerol_3-phosphate root -------------------- NONBALANCED COMPOUNDS -------------------- Biomass_plant external CO2 external H2O external Nitrate external O2 external Orthophosphate external Starch external Sulfate external h external hv external -------------------- REVERSIBLE TRANSFOMER -------------------- ADK 1*AMP + 1*ATP = 2*ADP ADK_plastid 1*AMP + 1*ATP = 2*ADP ADP_root 1*AMP + 1*ATP = 2*ADP ALA 1*Pyruvate + 1*L-Glutamate = 1*L-Alanine + 1*2-Oxoglutarate ALA_root 1*Pyruvate + 1*L-Glutamate = 1*L-Alanine + 1*2-Oxoglutarate ARG 1*L-Ornithine + 1*Carbamoyl_phosphate + 1*L-Aspartate + 1*ATP + 1*H2O = 1*L-Arginine + 1*Fumarate + 1*AMP + 3*Orthophosphate + 4*h ARG_root 1*L-Ornithine + 1*Carbamoyl_phosphate + 1*L-Aspartate + 1*ATP + 1*H2O = 1*L-Arginine + 1*Fumarate + 1*AMP + 3*Orthophosphate + 4*h ASP 1*Oxaloacetate + 1*L-Glutamate = 1*L-Aspartate + 1*2-Oxoglutarate ASP_root 1*Oxaloacetate + 1*L-Glutamate = 1*L-Aspartate + 1*2-Oxoglutarate ATP/ADPtranslocator.plastid 1*ATP_plastid+1*ADP_tmp3_plant+1*Orthophosphate_tmp_plant=1*ATP_tmp3_plant+1*ADP_plastid+1*Orthophosphate_plastid Aldo D-Fructose_1,6-bisphosphate = Glycerone-phosphate + D-Glyceraldehyde_3-phosphate Aldo_plastid Glycerone-phosphate + D-Glyceraldehyde_3-phosphate = D-Fructose_1,6-bisphosphate Aldo_root D-Fructose_1,6-bisphosphate = Glycerone-phosphate + D-Glyceraldehyde_3-phosphate Ash 308700/4079*Carbon_inorg+44640/4079*Phosphorus_inorg+11160/4079*Sulfur_inorg+43400/4079*Nitrogen_inorg=1*ash Ash_root 308700/4079*Carbon_inorg+44640/4079*Phosphorus_inorg+11160/4079*Sulfur_inorg+43400/4079*Nitrogen_inorg=1*ash Biomass_mesophyll 20*Cellulose+10*Starch+9*Lipid+25*Protein+1*RNA+20*pectin+12*Sucrose_vac+3*ash=1*Biomass_mesophyll Biomass_plant 479430655/33809377*Biomass_root+2901507045/33809377*Biomass_mesophyll=1*Biomass_plant Biomass_root 30*Cellulose+9*Lipid+1*RNA+25*Protein+20*pectin+12*Sucrose_vac+3*ash=1*Biomass_root CMP 1*CTP + 2*ADP = 1*CMP + 2*ATP CMP_root 1*CTP + 2*ADP = 1*CMP + 2*ATP CYS 1*L-Serine + 1*Acetyl-CoA + 1*H2S = 1*L-Cysteine + 1*CoA + 1*Acetate + 1*h CYS_root 1*L-Serine + 1*Acetyl-CoA + 1*H2S = 1*L-Cysteine + 1*CoA + 1*Acetate + 1*h ENO D-Glycerate_2-phosphate = Phosphoenolpyruvate + H2O ENO_root D-Glycerate_2-phosphate = Phosphoenolpyruvate + H2O FNR 2*Fd_red + NADP + h = 2*Fd_ox + NADPH Formyl 5-Formyltetrahydrofolate + ADP + Orthophosphate + NAD = Tetrahydrofolate + ATP + NADH + CO2 Formyl_root 5-Formyltetrahydrofolate + ADP + Orthophosphate + NAD = Tetrahydrofolate + ATP + NADH + CO2 GHMT 1*L-Serine + 1*Tetrahydrofolate = 1*Glycine + 1*5,10-Methylenetetrahydrofolate + 1*H2O GHMT_root 1*L-Serine + 1*Tetrahydrofolate = 1*Glycine + 1*5,10-Methylenetetrahydrofolate + 1*H2O Glyc 1*sn-Glycerol_3-phosphate + 1*H2O = 1*Glycerol + 1*Orthophosphate Glyc_root 1*sn-Glycerol_3-phosphate + 1*H2O = 1*Glycerol + 1*Orthophosphate Hexa 8*Acetyl-CoA + 7*ATP + 14*NADPH + 6*h + 1*H2O = 1*Hexadecanoate + 8*CoA + 7*ADP + 14*NADP + 7*Orthophosphate Hexa_root 8*Acetyl-CoA + 7*ATP + 14*NADPH + 6*h + 1*H2O = 1*Hexadecanoate + 8*CoA + 7*ADP + 14*NADP + 7*Orthophosphate His 1*PRPP + 1*L-Glutamine + 1*ATP + 2*NAD + 5*H2O = 1*L-Histidine + 1*AICAR + 1*2-Oxoglutarate + 2*NADH + 7*h + 5*Orthophosphate His_root 1*PRPP + 1*L-Glutamine + 1*ATP + 2*NAD + 5*H2O = 1*L-Histidine + 1*AICAR + 1*2-Oxoglutarate + 2*NADH + 7*h + 5*Orthophosphate HomoSer 1*L-Aspartate + 1*ATP + 2*NADPH + 2*h = 1*L-Homoserine + 1*ADP + 1*Orthophosphate + 2*NADP HomoSer_root 1*L-Aspartate + 1*ATP + 2*NADPH + 2*h = 1*L-Homoserine + 1*ADP + 1*Orthophosphate + 2*NADP ILE 1*L-Threonine + 1*Pyruvate + 1*NADPH + 1*L-Glutamate + 2*h = 1*L-Isoleucine + 1*NH4 + 1*NADP + 1*H2O + 1*CO2 + 1*2-Oxoglutarate ILE_root 1*L-Threonine + 1*Pyruvate + 1*NADPH + 1*L-Glutamate + 2*h = 1*L-Isoleucine + 1*NH4 + 1*NADP + 1*H2O + 1*CO2 + 1*2-Oxoglutarate Leu 1*3-Methyl-2-oxobutanoate + 1*L-Glutamate + 1*Acetyl-CoA + 1*H2O + 1*NAD = 1*L-Leucine + 1*2-Oxoglutarate + 1*CoA + 1*NADH + 1*h + 1*CO2 Leu_root 1*3-Methyl-2-oxobutanoate + 1*L-Glutamate + 1*Acetyl-CoA + 1*H2O + 1*NAD = 1*L-Leucine + 1*2-Oxoglutarate + 1*CoA + 1*NADH + 1*h + 1*CO2 Lino 1*cis-Octadecenoate + 1*NADH + 1*h + 1*O2 = 1*Linoleate + 1*NAD + 2*H2O Lino_root 1*cis-Octadecenoate + 1*NADH + 1*h + 1*O2 = 1*Linoleate + 1*NAD + 2*H2O Lipidpoly 723/2500*Hexadecanoate+387/625*cis-Octadecenoate+1041/1000*cis-Hexadecenoate+93/1250*Octadecanoate+9/5000*Linoleate+609/625*Glycerol=1*Lipid+2*H2O Lipidpoly_root 723/2500*Hexadecanoate+387/625*cis-Octadecenoate+1041/1000*cis-Hexadecenoate+93/1250*Octadecanoate+9/5000*Linoleate+609/625*Glycerol=1*Lipid+2*H2O MDH 1*L-Malate + 1*NAD = 1*Oxaloacetate + 1*NADH + 1*h MDH_mitochondria 1*L-Malate + 1*NAD = 1*Oxaloacetate + 1*NADH + 1*h MDH_mitochondria_root 1*L-Malate + 1*NAD = 1*Oxaloacetate + 1*NADH + 1*h MDH_root 1*L-Malate + 1*NAD = 1*Oxaloacetate + 1*NADH + 1*h NADP_MDH 1*Oxaloacetate + 1*NADPH + 1*h = 1*L-Malate + 1*NADP Octa 1*Hexadecanoate + 2*NADPH + 1*h + 1*Acetyl-CoA + 1*ATP = 1*Octadecanoate + 1*ADP + 1*Orthophosphate + 2*NADP + 1*CoA Octa_root 1*Hexadecanoate + 2*NADPH + 1*h + 1*Acetyl-CoA + 1*ATP = 1*Octadecanoate + 1*ADP + 1*Orthophosphate + 2*NADP + 1*CoA PGI D-Glucose_6-phosphate = D-Fructose_6-phosphate PGI_plastid D-Fructose_6-phosphate = D-Glucose_6-phosphate PGI_root D-Glucose_6-phosphate = D-Fructose_6-phosphate PGK 1,3-bisphospho-D-Glycerate + ADP = D-Glycerate_3-phosphate + ATP PGK_plastid D-Glycerate_3-phosphate + ATP = 1,3-bisphospho-D-Glycerate + ADP PGK_root 1,3-bisphospho-D-Glycerate + ADP = D-Glycerate_3-phosphate + ATP PGM D-Glycerate_3-phosphate = D-Glycerate_2-phosphate PGM3 D-Glucose_1-phosphate = D-Glucose_6-phosphate PGM3_plastid D-Glucose_6-phosphate = D-Glucose_1-phosphate PGM3_root D-Glucose_1-phosphate = D-Glucose_6-phosphate PGM_root D-Glycerate_3-phosphate = D-Glycerate_2-phosphate PK Phosphoenolpyruvate + ADP + h = Pyruvate + ATP PK_root Phosphoenolpyruvate + ADP + h = Pyruvate + ATP PRO 1*L-Glutamate + 1*ATP + 2*NADPH + h = 1*L-Proline + 1*ADP + 1*Orthophosphate + 1*H2O + 2*NADP PRO_root 1*L-Glutamate + 1*ATP + 2*NADPH + h = 1*L-Proline + 1*ADP + 1*Orthophosphate + 1*H2O + 2*NADP Proteinpoly 333/10*L-Glutamate+333/10*L-Glutamine+3*L-Proline+42/5*L-Arginine+9/2*L-Lysine+126/5*L-Serine+93/10*Glycine+27/5*L-Cysteine+141/5*L-Aspartate+141/5*L-Asparagine+102/5*L-Threonine+9/4*L-Methionine+51/5*L-Isoleucine+363/10*L-Alanine+6*L-Valine+102/5*L-Leucine+48/5*L-Phenylalanine+9*L-Tyrosine+9/4*L-Tryptophan+24/5*L-Histidine+1196*ATP+897*H2O=1*Protein+1196*ADP+1196*Orthophosphate+1196*h Proteinpoly_root 333/10*L-Glutamate+333/10*L-Glutamine+3*L-Proline+42/5*L-Arginine+9/2*L-Lysine+126/5*L-Serine+93/10*Glycine+27/5*L-Cysteine+141/5*L-Aspartate+141/5*L-Asparagine+102/5*L-Threonine+9/4*L-Methionine+51/5*L-Isoleucine+363/10*L-Alanine+6*L-Valine+102/5*L-Leucine+48/5*L-Phenylalanine+9*L-Tyrosine+9/4*L-Tryptophan+24/5*L-Histidine+1196*ATP+897*H2O=1*Protein+1196*ADP+1196*Orthophosphate+1196*h R5PI D-Ribulose_5-phosphate = D-Ribose_5-phosphate R5PI_plastid D-Ribose_5-phosphate = D-Ribulose_5-phosphate R5PI_root D-Ribulose_5-phosphate = D-Ribose_5-phosphate RDPK 1*D-Ribose_5-phosphate + 1*ATP = 1*PRPP + 1*AMP + 1*h RDPK_root 1*D-Ribose_5-phosphate + 1*ATP = 1*PRPP + 1*AMP + 1*h RNApoly 80008/25*AMP+330033/100*GMP+130013/50*UMP+90009/100*CMP+10000*ATP+10000*H2O=1*RNA+10000*ADP+10000*Orthophosphate+10000*h RNApoly_root 80008/25*AMP+330033/100*GMP+130013/50*UMP+90009/100*CMP+10000*ATP+10000*H2O=1*RNA+10000*ADP+10000*Orthophosphate+10000*h RPE D-Ribulose_5-phosphate = D-Xylulose_5-phosphate RPE_plastid D-Xylulose_5-phosphate = D-Ribulose_5-phosphate RPE_root D-Ribulose_5-phosphate = D-Xylulose_5-phosphate SCL 1*Succinyl-CoA + 1*ADP + 1*Orthophosphate = 1*Succinate + 1*ATP + 1*CoA SCL_root 1*Succinyl-CoA + 1*ADP + 1*Orthophosphate = 1*Succinate + 1*ATP + 1*CoA SPP Sucrose_6-phosphate + H2O = Sucrose + Orthophosphate T.ADP.mesophyll (mitochondria <=> mesophyll) ADP_mesophyll = ADP_tmp_plant T.ADP.plastid 1*ADP_tmp3_plant=1*ADP_mesophyll T.ADP.root (mitochondria <=> root) ADP_root = ADP_tmp2_plant T.ATP.mesophyll (mitochondria <=> mesophyll) ATP_mesophyll = ATP_tmp_plant T.ATP.plastid 1*ATP_tmp3_plant=1*ATP_mesophyll T.ATP.root (mitochondria <=> root) ATP_root = ATP_tmp2_plant T.CO2.ext CO2_plant=CO2_external T.CO2.mesophyll CO2_mesophyll = CO2_plant T.CO2.mesophyll (mitochondria <=> mesophyll) CO2_mesophyll = CO2_tmp2_plant T.CO2.mesophyll(plastid<=>mesophyll) CO2_tmp_plant = CO2_mesophyll T.CO2.mitochondria (mitochondria <=> mesophyll) 1*CO2_tmp2_plant=1*CO2_Mitochondria_mesophyll T.CO2.mitochondria (mitochondria <=> root) 1*CO2_tmp3_plant=1*CO2_Mitochondria_root T.CO2.phloem CO2_phloem=CO2_plant T.CO2.plastid(plastid<=>mesophyll) CO2_plastid = CO2_tmp_plant T.CO2.root CO2_root = CO2_plant T.CO2.root (mitochondria <=> root) CO2_root = CO2_tmp3_plant T.Fumarate.mesophyll (mitochondria <=> mesophyll) Fumarate_mesophyll = Fumarate_tmp_plant T.Fumarate.mitochondria (mitochondria <=> mesophyll) 1*Fumarate_tmp_plant=1*Fumarate_Mitochondria_mesophyll T.Fumarate.mitochondria (mitochondria <=> root) 1*Fumarate_tmp2_plant=1*Fumarate_Mitochondria_root T.Fumarate.root (mitochondria <=> root) Fumarate_root = Fumarate_tmp2_plant T.GAP.plastid 1*D-Glyceraldehyde_3-phosphate_plastid+1*Orthophosphate_tmp_plant=1*D-Glyceraldehyde_3-phosphate_tmp_plant+1*Orthophosphate_plastid T.GAP.plastid2 1*D-Glyceraldehyde_3-phosphate_tmp_plant=1*D-Glyceraldehyde_3-phosphate_mesophyll T.Glu.plastid1 1*L-Glutamate_tmp_plant=1*L-Glutamate_mesophyll T.Glu.plastid2 1*L-Glutamate_plastid=1*L-Glutamate_tmp_plant T.Glutamine.plastid1 1*L-Glutamine_tmp_plant=1*L-Glutamine_mesophyll T.Glutamine.plastid2 1*L-Glutamine_tmp_plant=1*L-Glutamine_plastid T.Glyceraate.mesophyll D-Glycerate_mesophyll=D-Glycerate_plant T.Glycolate.mesophyll Glycolate_plant=Glycolate_mesophyll T.H2O.mesophyll (mitochondria <=> mesophyll) H2O_mesophyll = H2O_tmp2_plant T.H2O.mesophyll(plastid<=>mesophyll) H2O_tmp_plant = H2O_mesophyll T.H2O.mitochondria (mitochondria <=> mesophyll) 1*H2O_tmp2_plant=1*H2O_Mitochondria_mesophyll T.H2O.mitochondria (mitochondria <=> root) 1*H2O_tmp3_plant=1*H2O_Mitochondria_root T.H2O.plastid(plastid<=>mesophyll) H2O_plastid = H2O_tmp_plant T.H2O.root (mitochondria <=>root) H2O_root = H2O_tmp3_plant T.H2S.plastid1 1*H2S_tmp_plant=1*H2S_mesophyll T.Isocitrate.mesophyll (mitochondria <=> mesophyll) Isocitrate_mesophyll = Isocitrate_tmp_plant T.Isocitrate.mitochondria (mitochondria <=> mesophyll) 1*Isocitrate_tmp_plant=1*Isocitrate_Mitochondria_mesophyll T.Isocitrate.mitochondria (mitochondria <=> root) 1*Isocitrate_tmp2_plant=1*Isocitrate_Mitochondria_root T.Isocitrate.root (mitochondria <=> root) Isocitrate_root = Isocitrate_tmp2_plant T.KG.plastid1 1*2-Oxoglutarate_tmp3_plant=1*2-Oxoglutarate_mesophyll T.KG.plastid2 1*2-Oxoglutarate_tmp3_plant=1*2-Oxoglutarate_plastid T.Malate.mesophyll(plastid<=>mesophyll) 1*L-Malate_mesophyll=1*L-Malate_tmp3_plant T.Malate.mit 1*L-Malate_mesophyll=1*L-Malate_tmp_plant T.Malate.root(mitochondria<=>root) 1*L-Malate_root=1*L-Malate_tmp2_plant T.NH4.mesophyll 1*NH4_plant=1*NH4_mesophyll T.NO2.plastid1 1*Nitrite_mesophyll=1*Nitrite_tmp_plant T.O2.ext O2_plant=O2_external T.O2.mesophyll O2_mesophyll = O2_plant T.O2.mesophyll (mitochondria <=> mesophyll) O2_mesophyll = O2_tmp2_plant T.O2.mesophyll (palstid <=> mesophyll) O2_tmp_plant = O2_mesophyll T.O2.mitochondria (mitochondria <=> mesophyll) 1*O2_tmp2_plant=1*O2_Mitochondria_mesophyll T.O2.mitochondria (mitochondria <=> root) 1*O2_tmp3_plant=1*O2_Mitochondria_root T.O2.phloem O2_phloem=O2_plant T.O2.plastid (palstid <=> mesophyll) O2_plastid = O2_tmp_plant T.O2.root O2_root = O2_plant T.O2.root (mitochondria <=> root) O2_root = O2_tmp3_plant T.OAA.mesophyll (mitochondrion <=> mesophyll) 1*Oxaloacetate_tmp2_plant=1*Oxaloacetate_mesophyll T.OAA.mesophyll (palstid <=> mesophyll) 1*Oxaloacetate_mesophyll=1*Oxaloacetate_tmp_plant T.OAA.root (mitochondrion <=> root) 1*Oxaloacetate_tmp3_plant=1*Oxaloacetate_root T.Orthophosphate.mesophyll (mesophyll<=>mitochondria) Orthophosphate_mesophyll = Orthophosphate_tmp2_plant T.Orthophosphate.root (root<=>mitochondria) Orthophosphate_root = Orthophosphate_tmp3_plant T.Oxoglutarate.mesophyll(mitochondria<=>mesophyll) 1*2-Oxoglutarate_mesophyll=1*2-Oxoglutarate_tmp_plant T.Oxoglutarate.mitochondria(mitochondria<=>mesophyll) 1*2-Oxoglutarate_tmp_plant=1*2-Oxoglutarate_Mitochondria_mesophyll T.Oxoglutarate.mitochondria(mitochondria<=>root) 1*2-Oxoglutarate_tmp2_plant=1*2-Oxoglutarate_Mitochondria_root T.Oxoglutarate.root(mitochondria<=>root) 1*2-Oxoglutarate_root=1*2-Oxoglutarate_tmp2_plant T.P.plastid 1*Orthophosphate_mesophyll=1*Orthophosphate_tmp_plant T.P.plastid2 1*Orthophosphate_tmp_plant=1*Orthophosphate_plastid T.Pyruvate.mesophyll (mesophyll<=>mitochondria) Pyruvate_mesophyll = Pyruvate_tmp_plant T.Pyruvate.root (root<=>mitochondria) Pyruvate_root = Pyruvate_tmp2_plant T.Starch.plant(plant<=>mesophyll) 1*Starch_tmp_plant=1*Starch_mesophyll T.Sucrose.mesophyll Sucrose_mesophyll = Sucrose_plant T.Sucrose.phloem.unload Sucrose_phloem = Sucrose_tmp_plant T.Sucrose.root Sucrose_root + h_root = Sucrose_tmp_plant + h_tmp5_plant T.Sulfate.plastid 1*Sulfate_mesophyll=1*Sulfate_tmp_plant T.alpha-Maltose.mesophyll(plastid<=>mesophyll) alpha-Maltose_tmp_plant =alpha-Maltose_mesophyll T.h.mit_mesphyll1 1*h_mesophyll=1*h_tmp2_plant T.h.mit_mesphyll2 1*h_tmp2_plant=1*h_Mitochondria_mesophyll T.h.mitochondria_root1 1*h_root=1*h_tmp3_plant T.h.mitochondria_root2 1*h_tmp3_plant=1*h_Mitochondria_root T.h.plastid_mesophyll1 1*h_tmp_plant=1*h_mesophyll T.h.plastid_mesophyll2 1*h_plastid=1*h_tmp_plant TA D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate = D-Fructose_6-phosphate + D-Erythrose_4-phosphate TA_plastid D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate = D-Fructose_6-phosphate + D-Erythrose_4-phosphate TA_root D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate = D-Fructose_6-phosphate + D-Erythrose_4-phosphate TKa D-Ribose_5-phosphate + D-Xylulose_5-phosphate = D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate TKa_plastid D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate = D-Ribose_5-phosphate + D-Xylulose_5-phosphate TKa_root D-Ribose_5-phosphate + D-Xylulose_5-phosphate = D-Sedoheptulose_7-phosphate + D-Glyceraldehyde_3-phosphate TKb D-Erythrose_4-phosphate + D-Xylulose_5-phosphate = D-Fructose_6-phosphate + D-Glyceraldehyde_3-phosphate TKb_plastid D-Fructose_6-phosphate + D-Glyceraldehyde_3-phosphate = D-Erythrose_4-phosphate + D-Xylulose_5-phosphate TKb_root D-Erythrose_4-phosphate + D-Xylulose_5-phosphate = D-Fructose_6-phosphate + D-Glyceraldehyde_3-phosphate TPI D-Glyceraldehyde_3-phosphate = Glycerone-phosphate TPI_plastid D-Glyceraldehyde_3-phosphate = Glycerone-phosphate TPI_root D-Glyceraldehyde_3-phosphate = Glycerone-phosphate Thr 1*L-Homoserine + 1*ATP + 1*H2O = 1*L-Threonine + 1*ADP + 1*Orthophosphate + 1*h Thr_root 1*L-Homoserine + 1*ATP + 1*H2O = 1*L-Threonine + 1*ADP + 1*Orthophosphate + 1*h Tyr 1*Chorismate + 1*L-Glutamate + 1*NAD = 1*L-Tyrosine + 1*2-Oxoglutarate + 1*CO2 + 1*NADH Tyr_root 1*Chorismate + 1*L-Glutamate + 1*NAD = 1*L-Tyrosine + 1*2-Oxoglutarate + 1*CO2 + 1*NADH UDP 1*UMP + 1*ATP = 1*UDP + 1*ADP UDP_root 1*UMP + 1*ATP = 1*UDP + 1*ADP UGP UDP-Glucose + 2*Orthophosphate = UTP + D-Glucose_1-phosphate + H2O UGP_root UDP-Glucose + 2*Orthophosphate = UTP + D-Glucose_1-phosphate + H2O UTP 1*UDP + 1*ATP = 1*UTP + 1*ADP UTP_root 1*UDP + 1*ATP = 1*UTP + 1*ADP VAL 2*Pyruvate + 1*L-Glutamate + 1*NADPH + 2*h = 1*L-Valine + 1*2-Oxoglutarate + 1*H2O + 1*NADP + 1*CO2 VAL_root 2*Pyruvate + 1*L-Glutamate + 1*NADPH + 2*h = 1*L-Valine + 1*2-Oxoglutarate + 1*H2O + 1*NADP + 1*CO2 cellulose_mesophyll 1000*UDP-Glucose=1*Cellulose+1000*UDP cellulose_root 1000*UDP-Glucose=1*Cellulose+1000*UDP cis-Hexa 1*Hexadecanoate + 1*NADH + 1/2*O2 + 1*h = 1*cis-Hexadecenoate + 1*NAD + 1*H2O cis-Hexa_root 1*Hexadecanoate + 1*NADH + 1/2*O2 + 1*h = 1*cis-Hexadecenoate + 1*NAD + 1*H2O cis-Octa 1*Octadecanoate + 1*NADH + 1*h + 1*O2 = 1*cis-Octadecenoate + 1*NAD + 2*H2O cis-Octa_root 1*Octadecanoate + 1*NADH + 1*h + 1*O2 = 1*cis-Octadecenoate + 1*NAD + 2*H2O pH_mesophyll H2O = h + OH pH_mit_root H2O = h + OH pH_phloem H2O = h + OH pH_root H2O = h + OH pectin_mesophyll 300*UDP-Glucuronate=1*pectin+300*UDP pectin_root 300*UDP-Glucuronate=1*pectin+300*UDP starch synthase 600*ADP-Glucose=1*Starch+600*ADP -------------------- IRREVERSIBLE TRANSFORMER -------------------- ACL 1*Isocitrate + 1*CoA + 1*ATP => 1*Acetyl-CoA + 1*ADP + 1*Orthophosphate + 1*Oxaloacetate ACL_root 1*Isocitrate + 1*CoA + 1*ATP => 1*Acetyl-CoA + 1*ADP + 1*Orthophosphate + 1*Oxaloacetate ACOL 1*Acetate + 1*CoA + 1*ATP + 1*H2O => 1*Acetyl-CoA + 1*AMP + 2*Orthophosphate + 1*h ACOL_root 1*Acetate + 1*CoA + 1*ATP + 1*H2O => 1*Acetyl-CoA + 1*AMP + 2*Orthophosphate + 1*h ADG_plastid D-Glucose_1-phosphate + ATP + H2O => ADP-Glucose + 2*Orthophosphate AGT Glyoxylate + L-Serine => Glycine + 3-Hydroxypyruvate AICAR 1*PRPP + 2*L-Glutamine + 1*Glycine + 5*ATP + 1*L-Aspartate + 1*5-Formyltetrahydrofolate + 4*H2O + 1*CO2 => 1*AICAR + 5*ADP + 7*Orthophosphate + 2*L-Glutamate + 1*Tetrahydrofolate + 1*Fumarate + 9*h AICAR_root 1*PRPP + 2*L-Glutamine + 1*Glycine + 5*ATP + 1*L-Aspartate + 1*5-Formyltetrahydrofolate + 4*H2O + 1*CO2 => 1*AICAR + 5*ADP + 7*Orthophosphate + 2*L-Glutamate + 1*Tetrahydrofolate + 1*Fumarate + 9*h AL_plastid Glycerone-phosphate + D-Erythrose_4-phosphate => Sedoheptulose_1,7-bisphosphate AMP 1*IMP + 1*L-Aspartate + 1*ATP => 1*AMP + 1*ADP + 1*Orthophosphate + 1*Fumarate + 1*h AMP_root 1*IMP + 1*L-Aspartate + 1*ATP => 1*AMP + 1*ADP + 1*Orthophosphate + 1*Fumarate + 1*h APS Sulfate + ATP + H2O => APS + 2*Orthophosphate + h APS_reductase APS + NADPH => NADP + AMP + Sulfite ASN 1*L-Aspartate + 1*L-Glutamine + 1*ATP + 2*H2O => 1*L-Asparagine + 2*h + 1*AMP + 2*Orthophosphate + 1*L-Glutamate ASN_root 1*L-Aspartate + 1*L-Glutamine + 1*ATP + 2*H2O => 1*L-Asparagine + 2*h + 1*AMP + 2*Orthophosphate + 1*L-Glutamate ATP/ADPtranslocator.mitochondrion 1*ATP_tmp_plant+1*ADP_Mitochondria_mesophyll<=1*ATP_Mitochondria_mesophyll+1*ADP_tmp_plant ATP/ADPtranslocator.mitochondrion.root 1*ATP_tmp2_plant+1*ADP_Mitochondria_root<=1*ATP_Mitochondria_root+1*ADP_tmp2_plant ATP_synthase 1*ATP_plastid + 1*H2O_plastid + 3*h_plastid <= 1*ADP_plastid + 1*Orthophosphate_plastid + 4*H_in_tmp3_plant BAM 6-Phosphogluco-amylopectin + 49*H2O => Orthophosphate + 50*alpha-Maltose CAT 2*H2O2 => 2*H2O + O2 CIS_mitochondria 1*Oxaloacetate + 1*Acetyl-CoA + 1*H2O => 1*Isocitrate + 1*CoA + 1*h CIS_mitochondria_root 1*Oxaloacetate + 1*Acetyl-CoA + 1*H2O => 1*Isocitrate + 1*CoA + 1*h CPS 2*ATP + 1*NH4 + 1*CO2 + 1*H2O => 1*Carbamoyl_phosphate + 2*ADP + 2*h + 1*Orthophosphate CPS_root 2*ATP + 1*NH4 + 1*CO2 + 1*H2O => 1*Carbamoyl_phosphate + 2*ADP + 2*h + 1*Orthophosphate CTP 1*UTP + 1*L-Glutamine + 1*ATP + 1*H2O => 1*CTP + 1*ADP + 1*Orthophosphate + 2*h + 1*L-Glutamate CTP_root 1*UTP + 1*L-Glutamine + 1*ATP + 1*H2O => 1*CTP + 1*ADP + 1*Orthophosphate + 2*h + 1*L-Glutamate Chor 2*Phosphoenolpyruvate + 1*D-Erythrose_4-phosphate + 1*NADPH + 1*ATP => 1*Chorismate + 1*ADP + 4*Orthophosphate + 1*NADP Chor_root 2*Phosphoenolpyruvate + 1*D-Erythrose_4-phosphate + 1*NADPH + 1*ATP => 1*Chorismate + 1*ADP + 4*Orthophosphate + 1*NADP ET Plastoquinol_plastid + 2*PC_ox_plastid + 2*h_plastid => Plastoquinone_plastid + 2*PC_red_plastid + 4*H_in_tmp3_plant FBP D-Fructose_1,6-bisphosphate + H2O => D-Fructose_6-phosphate + Orthophosphate FBP_plastid D-Fructose_1,6-bisphosphate + H2O => D-Fructose_6-phosphate + Orthophosphate FF_root Sucrose + H2O => D-Glucose + beta-D-Fructofuranose FK_root beta-D-Fructofuranose + ATP => D-Fructose_6-phosphate + ADP + h FQR 2*Fd_red + Plastoquinone + 2*h => 2*Fd_ox + Plastoquinol FUM 1*Fumarate + 1*H2O => 1*L-Malate FUM_root 1*Fumarate + 1*H2O => 1*L-Malate G6PDH D-Glucose_6-phosphate + NADP => D-Glucono-1,5-lactone_6-phosphate + NADPH + h G6PDH_plastid D-Glucose_6-phosphate + NADP => D-Glucono-1,5-lactone_6-phosphate + NADPH + h G6PDH_root D-Glucose_6-phosphate + NADP => D-Glucono-1,5-lactone_6-phosphate + NADPH + h GAPDH D-Glyceraldehyde_3-phosphate + Orthophosphate + NAD => 1,3-bisphospho-D-Glycerate + NADH + h GAPDH_plastid 1,3-bisphospho-D-Glycerate + NADPH + h => NADP + Orthophosphate + D-Glyceraldehyde_3-phosphate GAPDH_root D-Glyceraldehyde_3-phosphate + Orthophosphate + NAD => 1,3-bisphospho-D-Glycerate + NADH + h GAT Glyoxylate + L-Glutamate => Glycine + 2-Oxoglutarate GDC Glycine + Tetrahydrofolate + NAD => CO2 + NADH + 5,10-Methylenetetrahydrofolate + NH4 GDH L-Glutamate + NAD + H2O => 2-Oxoglutarate + NH4 + NADH + h GDH_root L-Glutamate + NAD + H2O => 2-Oxoglutarate + NH4 + NADH + h GLK D-Glucose + ATP => D-Glucose_6-phosphate + ADP + h GLK_root D-Glucose + ATP => D-Glucose_6-phosphate + ADP + h GLO Glycolate + O2 => Glyoxylate + H2O2 GLU_plastid 2-Oxoglutarate + L-Glutamine + 2*Fd_red => 2*L-Glutamate + 2*Fd_ox GLYK D-Glycerate + ATP => D-Glycerate_3-phosphate + ADP + h GMP 1*IMP + 1*NAD + 2*ATP + 1*L-Glutamine + 3*H2O => 1*GMP + 2*ADP + 2*Orthophosphate + 1*L-Glutamate + 1*NADH + 4*h GMP_root 1*IMP + 1*NAD + 2*ATP + 1*L-Glutamine + 3*H2O => 1*GMP + 2*ADP + 2*Orthophosphate + 1*L-Glutamate + 1*NADH + 4*h GOGAT_root 2-Oxoglutarate + L-Glutamine + NADH => 2*L-Glutamate + NAD GPDH 1*Glycerone-phosphate+ 1*NADH+ 1*h => 1*sn-Glycerol_3-phosphate+ 1*NAD GPDH_root 1*Glycerone-phosphate+ 1*NADH+ 1*h => 1*sn-Glycerol_3-phosphate+ 1*NAD GS_plastid 1*L-Glutamate + 1*NH4 + 1*ATP => 1*L-Glutamine + 1*ADP + 1*Orthophosphate GS_root 1*L-Glutamate + 1*NH4 + 1*ATP => 1*L-Glutamine + 1*ADP + 1*Orthophosphate H-ATPase2_root 1*h_root + 1*ATP_root + 1*OH_root => 1*h_tmp4_plant + 1*ADP_root + 1*Orthophosphate_root H-ATPase_mesophyll 1*h_mesophyll + 1*ATP_mesophyll + 1*OH_mesophyll => 1*h_tmp6_plant+ 1*ADP_mesophyll + 1*Orthophosphate_mesophyll H-ATPase_phloem1 1*h_phloem + 1*ATP_phloem + 1*OH_phloem => 1*h_tmp6_plant+ 1*ADP_phloem + 1*Orthophosphate_phloem H-ATPase_phloem2 1*h_phloem + 1*ATP_phloem + 1*OH_phloem => 1*h_tmp5_plant+ 1*ADP_phloem + 1*Orthophosphate_phloem H-ATPase_root 1*h_root + 1*ATP_root + 1*OH_root => 1*h_tmp5_plant + 1*ADP_root + 1*Orthophosphate_root HPR 3-Hydroxypyruvate + NADH + h => NAD + D-Glycerate IDH 1*Isocitrate + 1*NADP => 1*2-Oxoglutarate + 1*NADPH + 1*CO2 IDH_mitochondria 1*Isocitrate + 1*NAD => 1*2-Oxoglutarate + 1*NADH + 1*CO2 IDH_mitochondria_root 1*Isocitrate + 1*NAD => 1*2-Oxoglutarate + 1*NADH + 1*CO2 IMP 1*AICAR + 1*5-Formyltetrahydrofolate => 1*Tetrahydrofolate + 1*IMP + 1*H2O + 2*h IMP_root 1*AICAR + 1*5-Formyltetrahydrofolate => 1*Tetrahydrofolate + 1*IMP + 1*H2O + 2*h Lys 2*L-Glutamate + 1*Acetyl-CoA + 1*ATP + 2*NADPH + 2*NAD + 2*H2O => 1*L-Lysine + 1*CO2 + 1*2-Oxoglutarate + 1*CoA + 1*AMP + 2*NADP + 2*Orthophosphate + 1*h + 2*NADH Lys_root 2*L-Glutamate + 1*Acetyl-CoA + 1*ATP + 2*NADPH + 2*NAD + 2*H2O => 1*L-Lysine + 1*CO2 + 1*2-Oxoglutarate + 1*CoA + 1*AMP + 2*NADP + 2*Orthophosphate + 1*h + 2*NADH MET 1*L-Homoserine + 1*ATP + 1*L-Cysteine + 1*5-Methyltetrahydrofolate + 1*H2O => 1*L-Methionine + 1*ADP + 1*Orthophosphate + 1*Pyruvate + 1*NH4 + 1*Tetrahydrofolate + 1*h MET_root 1*L-Homoserine + 1*ATP + 1*L-Cysteine + 1*5-Methyltetrahydrofolate + 1*H2O => 1*L-Methionine + 1*ADP + 1*Orthophosphate + 1*Pyruvate + 1*NH4 + 1*Tetrahydrofolate + 1*h MH alpha-Maltose + H2O => 2*D-Glucose MS3 5-Methyltetrahydrofolate + 3*NAD + 2*H2O => Tetrahydrofolate + 3*NADH + 3*h + CO2 MS3_root 5-Methyltetrahydrofolate + 3*NAD + 2*H2O => Tetrahydrofolate + 3*NADH + 3*h + CO2 MTHFR 5,10-Methylenetetrahydrofolate + NADH + h => 5-Methyltetrahydrofolate + NAD MTHFR_root 5,10-Methylenetetrahydrofolate + NADH + h => 5-Methyltetrahydrofolate + NAD NIA Nitrate + NADH + h => Nitrite + NAD + H2O NIA_root Nitrate + NADH + h => Nitrite + NAD + H2O NiR Nitrite + 8*h + 6*Fd_red => NH4 + 2*H2O + 6*Fd_ox NiR_root Nitrite + 8*h + 3*NADPH => NH4 + 2*H2O + 3*NADP + 3*h Orni 2*L-Glutamate + 1*Acetyl-CoA + 1*ATP + 1*NADPH + 1*H2O => 1*L-Ornithine + 1*2-Oxoglutarate + 1*CoA + 1*ADP + 1*Orthophosphate + 1*NADP + 1*Acetate Orni_root 2*L-Glutamate + 1*Acetyl-CoA + 1*ATP + 1*NADPH + 1*H2O => 1*L-Ornithine + 1*2-Oxoglutarate + 1*CoA + 1*ADP + 1*Orthophosphate + 1*NADP + 1*Acetate OxPhos1.mitochondrion_mesophyll 5*h_Mitochondria_mesophyll+1*NADH_Mitochondria_mesophyll+1*CoQ_Mitochondria_mesophyll=>4*H_in_tmp_plant+1*NAD_Mitochondria_mesophyll+1*CoQH2_Mitochondria_mesophyll OxPhos1.mitochondrion_root 5*h_Mitochondria_root+1*NADH_Mitochondria_root+1*CoQ_Mitochondria_root=>4*H_in_tmp2_plant+1*NAD_Mitochondria_root+1*CoQH2_Mitochondria_root OxPhos1_phloem 5*h + NADH + CoQ => 4*H_in + NAD + CoQH2 OxPhos2.mitochondrion_mesophyll 1*Succinate_Mitochondria_mesophyll+1*CoQ_Mitochondria_mesophyll=>1*Fumarate_Mitochondria_mesophyll+1*CoQH2_Mitochondria_mesophyll OxPhos2.mitochondrion_root 1*Succinate_Mitochondria_root+1*CoQ_Mitochondria_root=>1*Fumarate_Mitochondria_root+1*CoQH2_Mitochondria_root OxPhos2_phloem Succinate + CoQ => Fumarate + CoQH2 OxPhos3.mitochondrion_mesophyll 2*h_Mitochondria_mesophyll+1*CoQH2_Mitochondria_mesophyll+2*Cytochrom_c_ox_Mitochondria_mesophyll=>4*H_in_tmp_plant+1*CoQ_Mitochondria_mesophyll+2*Cytochrom_c_red_Mitochondria_mesophyll OxPhos3.mitochondrion_root 2*h_Mitochondria_root+1*CoQH2_Mitochondria_root+2*Cytochrom_c_ox_Mitochondria_root=>4*H_in_tmp2_plant+1*CoQ_Mitochondria_root+2*Cytochrom_c_red_Mitochondria_root OxPhos3_phloem 2*h + CoQH2 + 2*Cyt_ox => 4*H_in + CoQ + 2*Cyt_red OxPhos4.mitochondrion_mesophyll 8*h_Mitochondria_mesophyll+4*Cytochrom_c_red_Mitochondria_mesophyll+1*O2_Mitochondria_mesophyll=>4*H_in_tmp_plant+4*Cytochrom_c_ox_Mitochondria_mesophyll+2*H2O_Mitochondria_mesophyll OxPhos4.mitochondrion_root 8*h_Mitochondria_root+4*Cytochrom_c_red_Mitochondria_root+1*O2_Mitochondria_root=>4*H_in_tmp2_plant+4*Cytochrom_c_ox_Mitochondria_root+2*H2O_Mitochondria_root OxPhos4_phloem 8*h + 4*Cyt_red + O2 => 4*H_in + 4*Cyt_ox + 2*H2O OxPhos5.mitochondrion_mesophyll 3*H_in_tmp_plant+1*ADP_Mitochondria_mesophyll+1*Orthophosphate_Mitochondria_mesophyll=>2*h_Mitochondria_mesophyll+1*ATP_Mitochondria_mesophyll+1*H2O_Mitochondria_mesophyll OxPhos5.mitochonrion_root 1*ATP_Mitochondria_root+1*OH_Mitochondria_root+3*h_Mitochondria_root<=1*ADP_Mitochondria_root+1*Orthophosphate_Mitochondria_root+3*H_in_tmp2_plant OxPhos5_phloem 3*H_in + ADP + Orthophosphate => 2*h + ATP + H2O PDC_TCA Pyruvate + 2*H2O + ADP + Orthophosphate + 4*NAD + Fumarate => 3*CO2 + 2*h + ATP + 4*NADH + Succinate PDH Pyruvate + CoA + NAD => CO2 + NADH + Acetyl-CoA PDH_root Pyruvate + CoA + NAD => CO2 + NADH + Acetyl-CoA PFK D-Fructose_6-phosphate + ATP => ADP + D-Fructose_1,6-bisphosphate + h PFK_root D-Fructose_6-phosphate + ATP => ADP + D-Fructose_1,6-bisphosphate + h PGDH 6-phospho-D-Gluconate + NADP => D-Ribulose_5-phosphate + CO2 + NADPH PGDH_plastid 6-phospho-D-Gluconate + NADP => D-Ribulose_5-phosphate + CO2 + NADPH PGDH_root 6-phospho-D-Gluconate + NADP => D-Ribulose_5-phosphate + CO2 + NADPH PGL D-Glucono-1,5-lactone_6-phosphate + H2O => 6-phospho-D-Gluconate + h PGL_plastid D-Glucono-1,5-lactone_6-phosphate + H2O => 6-phospho-D-Gluconate + h PGL_root D-Glucono-1,5-lactone_6-phosphate + H2O => 6-phospho-D-Gluconate + h PGP Phosphoglycolate + H2O => Glycolate + Orthophosphate PMet 2*Pyruvate + 1*NADPH + 2*h => 1*3-Methyl-2-oxobutanoate + 1*CO2 + 1*NADP + 1*H2O PMet_root 2*Pyruvate + 1*NADPH + 2*h => 1*3-Methyl-2-oxobutanoate + 1*CO2 + 1*NADP + 1*H2O PPC 1*Phosphoenolpyruvate + 1*CO2 + 1*H2O => 1*Oxaloacetate + 1*Orthophosphate + 1*h PPC_root 1*Phosphoenolpyruvate + 1*CO2 + 1*H2O => 1*Oxaloacetate + 1*Orthophosphate + 1*h PRK_plastid D-Ribulose_5-phosphate + ATP => D-Ribulose_1,5-bisphosphate + ADP + h PSI PC_red_plastid + Fd_ox_plastid + hv_plant => PC_ox_plastid + Fd_red_plastid PSII 2*H2O_plastid + 4*hv_plant + 2*Plastoquinone_plastid => 1*O2_plastid + 2*Plastoquinol_plastid Phe 1*Chorismate + 1*L-Glutamate + 1*h => 1*L-Phenylalanine + 1*2-Oxoglutarate + 1*CO2 + 1*H2O Phe_root 1*Chorismate + 1*L-Glutamate + 1*h => 1*L-Phenylalanine + 1*2-Oxoglutarate + 1*CO2 + 1*H2O RPC2_plastide D-Ribulose_1,5-bisphosphate + O2 => D-Glycerate_3-phosphate + Phosphoglycolate + 2*h RPC_plastide D-Ribulose_1,5-bisphosphate + CO2 + H2O => 2*D-Glycerate_3-phosphate + 2*h SBP_plastid Sedoheptulose_1,7-bisphosphate + H2O => D-Sedoheptulose_7-phosphate + Orthophosphate SER 1*D-Glycerate_3-phosphate + 1*L-Glutamate + 1*NAD + 1*H2O => 1*L-Serine + 1*2-Oxoglutarate + 1*Orthophosphate + 1*h + 1*NADH SER_root 1*D-Glycerate_3-phosphate + 1*L-Glutamate + 1*NAD + 1*H2O => 1*L-Serine + 1*2-Oxoglutarate + 1*Orthophosphate + 1*h + 1*NADH SK Starch + 6*ATP + 6*H2O => 6*6-Phosphogluco-amylopectin + 6*AMP + 6*Orthophosphate SPS UDP-Glucose + D-Fructose_6-phosphate => Sucrose_6-phosphate + UDP + h SUL_root 1*Sulfate + 2*ATP + 4*NADPH + 3*h => 1*H2S + 4*NADP + 1*AMP + 1*ADP + 3*Orthophosphate + 1*H2O Suc-CoA 1*2-Oxoglutarate + 1*CoA + 1*NAD => 1*Succinyl-CoA + 1*NADH + 1*CO2 Suc-CoA_root 1*2-Oxoglutarate + 1*CoA + 1*NAD => 1*Succinyl-CoA + 1*NADH + 1*CO2 Sulfite_reductase Sulfite + 3*Fd_red + 8*h => 3*Fd_ox + H2S + 3*H2O T.Biomass.ext Biomass_plant_plant => Biomass_plant_external T.Biomass.mesophyll Biomass_mesophyll_mesophyll => Biomass_mesophyll_plant T.Biomass.root Biomass_root_root => Biomass_root_plant T.Glycerate.plastid 1*D-Glycerate_plant=>1*D-Glycerate_plastid T.Glycolate.plastid 1*Glycolate_plastid=>1*Glycolate_plant T.H2O.ext H2O_external => H2O_plant T.H2O.ext2 H2O_tmp6_plant => H2O_external T.H2O.mesophyll.load H2O_tmp5_plant => H2O_mesophyll T.H2O.mesophyll.unload H2O_mesophyll => H2O_tmp6_plant T.H2O.phloem.load H2O_tmp4_plant => H2O_phloem T.H2O.phloem.unload H2O_phloem => H2O_tmp5_plant T.H2O.root.load H2O_plant => H2O_root T.H2O.root.unload H2O_root => H2O_tmp4_plant T.H2S.plastid2 1*H2S_plastid=>1*H2S_tmp_plant T.Malate.mit2 1*L-Malate_tmp_plant=>1*L-Malate_Mitochondria_mesophyll T.Malate.mitochondria(mitochondria<=>root) 1*L-Malate_tmp2_plant=>1*L-Malate_Mitochondria_root T.Malate.plastid 1*L-Malate_plastid=>1*L-Malate_tmp3_plant T.N.ext 1*Nitrate_plant+1*h_tmp4_plant<=1*Nitrate_external+1*h_external T.N.mesophyll.load 1*Nitrate_tmp3_plant + 1*h_tmp6_plant => 1*Nitrate_mesophyll+1*h_mesophyll T.N.phloem.load 1*Nitrate_tmp2_plant + 1*h_tmp5_plant => 1*Nitrate_phloem+1*h_phloem T.N.phloem.unload Nitrate_phloem => Nitrate_tmp3_plant T.N.root.load 1*Nitrate_plant + 1*h_tmp4_plant => 1*Nitrate_root+1*h_root T.N.root.unload Nitrate_root => Nitrate_tmp2_plant T.NH4.plastid 1*NH4_plastid<=1*NH4_plant T.NO2.plastid2 1*Nitrite_tmp_plant=>1*Nitrite_plastid T.OAA.mitochondrion 1*Oxaloacetate_tmp2_plant<=1*Oxaloacetate_Mitochondria_mesophyll T.OAA.mitochondrion (mitochondrion <=> root) 1*Oxaloacetate_Mitochondria_root=>1*Oxaloacetate_tmp3_plant T.OAA.plastid 1*Oxaloacetate_tmp_plant=>1*Oxaloacetate_plastid T.P.ext 1*Orthophosphate_plant+1*h_tmp4_plant<=1*Orthophosphate_external+1*h_external T.P.mesophyll.load 1*Orthophosphate_tmp5_plant+1*h_tmp6_plant => 1*Orthophosphate_mesophyll+1*h_mesophyll T.P.mit_mesophyll 1*Orthophosphate_tmp2_plant+1*H_in_tmp_plant=>1*Orthophosphate_Mitochondria_mesophyll+1*h_Mitochondria_mesophyll T.P.mitochondria_root2 1*Orthophosphate_tmp3_plant+1*H_in_tmp2_plant=>1*Orthophosphate_Mitochondria_root+1*h_Mitochondria_root T.P.phloem.load 1*Orthophosphate_tmp4_plant + 1*h_tmp5_plant => 1*Orthophosphate_phloem+1*h_phloem T.P.phloem.unload Orthophosphate_phloem => Orthophosphate_tmp5_plant T.P.root.load 1*Orthophosphate_plant + 1*h_tmp4_plant => 1*Orthophosphate_root+1*h_root T.P.root.unload Orthophosphate_root => Orthophosphate_tmp4_plant T.Pyruvate.mit_mesophyll2 1*Pyruvate_tmp_plant+1*H_in_tmp_plant=>1*Pyruvate_Mitochondria_mesophyll+1*h_Mitochondria_mesophyll T.Pyruvate.mitochondria_root 1*Pyruvate_tmp2_plant+1*H_in_tmp2_plant=>1*Pyruvate_Mitochondria_root+1*h_Mitochondria_root T.S.ext 1*Sulfate_plant+1*h_tmp4_plant<=1*Sulfate_external+1*h_external T.S.mesophyll.load 1*Sulfate_tmp3_plant + 1*h_tmp6_plant => 1*Sulfate_mesophyll + 1*h_mesophyll T.S.phloem.load 1*Sulfate_tmp2_plant + 1*h_tmp5_plant => 1*Sulfate_phloem+1*h_phloem T.S.phloem.unload Sulfate_phloem => Sulfate_tmp3_plant T.S.root.load 1*Sulfate_plant + 1*h_tmp4_plant => 1*Sulfate_root+1*h_root T.S.root.unload Sulfate_root => Sulfate_tmp2_plant T.Starch.Plastid (Plastid <=> Plant) 1*Starch_plastid<=1*Starch_plant T.Starch.plastid(plastid<=>mesophyll) 1*Starch_plastid=>1*Starch_tmp_plant T.Sucrose.phloem.load Sucrose_plant + h_tmp6_plant => Sucrose_phloem + h_phloem T.Sulfate.plastid2 1*Sulfate_plastid<=1*Sulfate_tmp_plant T.alpha-Maltose.plastid(plastid<=>mesophyll) 1*alpha-Maltose_plastid=>1*alpha-Maltose_tmp_plant T.h.ext 1*h_tmp4_plant => 1*h_external T.hv.ext 1*hv_plant<=1*hv_external T.starch.ext 1*Starch_plant<=1*Starch_external TRP 1*Chorismate + 1*L-Glutamine + 1*PRPP + 1*L-Serine => 1*L-Tryptophan + 2*Orthophosphate + 1*CO2 + 1*D-Glyceraldehyde_3-phosphate + 1*L-Glutamate + 2*h + 1*Pyruvate + 1*H2O TRP_root 1*Chorismate + 1*L-Glutamine + 1*PRPP + 1*L-Serine => 1*L-Tryptophan + 2*Orthophosphate + 1*CO2 + 1*D-Glyceraldehyde_3-phosphate + 1*L-Glutamate + 2*h + 1*Pyruvate + 1*H2O UGD UDP-Glucose + 2*NAD + H2O => UDP-Glucuronate + 2*NADH + 3*h UGD_root UDP-Glucose + 2*NAD + H2O => UDP-Glucuronate + 2*NADH + 3*h UMP 1*Carbamoyl_phosphate + 1*L-Aspartate + 1*NAD + 1*PRPP => 1*UMP + 1*NADH + 1*CO2 + 3*Orthophosphate + 2*h UMP_root 1*Carbamoyl_phosphate + 1*L-Aspartate + 1*NAD + 1*PRPP => 1*UMP + 1*NADH + 1*CO2 + 3*Orthophosphate + 2*h suc_hydrolysis_glycolysis Sucrose + H2O + 4*NAD + 4*ADP + 4*Orthophosphate => 4*Pyruvate + 4*NADH + 4*h + 4*ATP + 4*H2O vac_C CO2 + ATP + 2*H2O => Carbon_inorg + ADP + Orthophosphate + h vac_C_root CO2 + ATP + 2*H2O => Carbon_inorg + ADP + Orthophosphate + h vac_N Nitrate + 2*ATP + 2*H2O => Nitrogen_inorg + 2*ADP + 2*Orthophosphate + h vac_N_root Nitrate + 2*ATP + 2*H2O => Nitrogen_inorg + 2*ADP + 2*Orthophosphate + h vac_P Orthophosphate + 3*ATP + 3*H2O => Phosphorus_inorg + 3*ADP + 3*Orthophosphate + h vac_P_root Orthophosphate + 3*ATP + 3*H2O => Phosphorus_inorg + 3*ADP + 3*Orthophosphate + h vac_S Sulfate + 3*ATP + 3*H2O => Sulfur_inorg + 3*ADP + 3*Orthophosphate + h vac_S_root Sulfate + 3*ATP + 3*H2O => Sulfur_inorg + 3*ADP + 3*Orthophosphate + h vac_suc Sucrose + ATP + H2O => Sucrose_vac + ADP + Orthophosphate + h vac_suc_root Sucrose + ATP + H2O => Sucrose_vac + ADP + Orthophosphate + h
Export PNG
Creators and Submitter
Activity
Views: 7050 Downloads: 357
Created: 16th Apr 2016 at 21:38
Last updated: 4th Jun 2016 at 21:38
TagsThis item has not yet been tagged.
AttributionsNone
Version History
Version 2 (latest) Created 4th Jun 2016 at 21:38 by Maksim Zakhartsev
No revision comments
Related items
Advanced People list for this Data file with search and filtering
https://orcid.org/0000-0002-7973-9902
Projects: MOSES, ExtremoPharm, ZucAt, GenoSysFat, DigiSal, EraCoBiotech 2 nd call proposal preparation, FAIRDOM & LiSyM & de.NBI Data Structuring Training
Institutions: University of Stuttgart, University of Hohenheim, Norwegian University of Life Sciences, Norwegian University of Science and Technology
https://orcid.org/0000-0002-7973-9902
I've become a SysMO DB PAL for MOSES project in 2007 being a post-doc in lab of Prof. Matthias Reuss at University of Stuttgart. In the MOSES project, our major efforts were in the experimental data acquisition for dynamic model of primary carbon and anaerobic energy metabolism in yeast. The model implements prediction of perturbations of two types: glucose pulse and temperature jump. We implement “stimulus-response” methodology for the unraveling the dynamic structure of the network and to ...
Advanced Programmes list for this Data file with search and filtering
The German Network for Bioinformatics Infrastructure - de.NBI offers first class bioinformatics services including training and education to users in basic and applied life sciences research. In this network 40 projects belonging to eight service centers provide services that cover a wide variety of methods (genomics, proteomics, ...) and applications (from plants to humans). de.NBI-SysBio is the Systems Biology Service Center of de.NBI. In collaboration with FAIRDOM, de.NBI-SysBio serves the ...
Projects: de.NBI-SysBio, ExtremoPharm, ZucAt, Kinetics on the move - Workshop 2016, Example use cases, MIX-UP, Working Group Nicole Radde, MPIEvolBio-SciComp, SABIO-VIS
Web page: http://www.denbi.de
Advanced Projects list for this Data file with search and filtering
ZucAt - Sucrose (from german Zucker) translocation in Arabidopsis thaliana. Sucrose translocation between plant tissues is crucial for growth, development and reproduction of plants. Systemic analysis of this metabolic process and underlying regulatory processes can help to achieve better understanding of carbon distribution within the plant and the formation of phenotypic traits. Sucrose translocation from ‘source’ tissues (e.g. mesophyll) to ‘sink’ tissues (e.g. root) is tightly bound to the ...
Programme: de.NBI Systems Biology Service Center (de.NBI-SysBio)
Public web page: Not specified
Advanced Investigations list for this Data file with search and filtering
Sucrose translocation between plant tissues is crucial for growth, development and reproduction of plants. Systemic analysis of this metabolic process and underlying regulatory processes can help to achieve better understanding of carbon distribution within the plant and the formation of phenotypic traits. Sucrose translocation from ‘source’ tissues (e.g. mesophyll) to ‘sink’ tissues (e.g. root) is tightly bound to the proton gradient across the membranes. The plant sucrose transporters are grouped ...
Advanced Studies list for this Data file with search and filtering
we describe a multi-compartmental model consisting of a mesophyll cell with plastid and mitochondrion, a phloem cell, as well as a root cell with mitochondrion. In this model, the phloem was considered as a non-growing transport compartment, the mesophyll compartment was considered as both autotrophic (growing on CO2 under light) and heterotrophic (growing on starch in darkness), and the root was always considered as heterotrophic tissue completely dependent on sucrose supply from the mesophyll ...
Submitter: Maksim Zakhartsev
Investigation: Metabolic analysis of effects of sucrose transl...
Assays: Flux Balance Analysis of multi-compartment metabolic model of growing Ar...
Advanced Assays list for this Data file with search and filtering
The multi-compartmental metabolic network of Arabidopsis thaliana was reconstructed and optimized in order to explain growth stoichiometry of the plant both in light and in dark conditions. Balances and turnover of energy (ATP/ADP) and redox (NAD(P)H/NAD(P)) metabolites as well as proton in different compartments were estimated. The model showed that in light conditions, the plastid ATP balance depended on the relationship between fluxes through photorespiration and photosynthesis including both ...
Submitter: Maksim Zakhartsev
Biological problem addressed: Metabolic Network
Investigation: Metabolic analysis of effects of sucrose transl...
