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- Arabidopsis - starch and the circadian clock, Model 3 (Seaton et al., 2013) - PLM_79
A model of the circadian regulation of starch turnover, as published in Seaton, Ebenhoeh, Millar, Pokhilko, "Regulatory principles and experimental approaches to the circadian control of starch turnover", J. Roy. Soc. Interface, 2013. This model is referred to as "Model Variant 3".
Related Publications
Seaton, Ebenhoeh, Millar, Pokhilko (2013). Regulatory principles and experimental approaches to the circadian control of starch turnover. Journal of the Royal Society Interface.
Originally submitted to PLaSMo on 2013-11-21 15:30:23
SEEK ID: https://fairdomhub.org/studies/482
Projects: PlaSMo model repository
Experimentalists: Not specified
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Created: 10th Jan 2019 at 17:38
Related items
Projects: PlaSMo model repository
Institutions: University of Edinburgh
What is PlaSMo?
PlaSMo stands for Plant Systems-biology Modelling
Ensuring the achievements of yesterday's Mathematical Modellers will be available for the Systems Biologists of tomorrow.
Our aims
- To identify plant mathematical models useful to the UK plant systems biology community, which are currently in a variety of legacy formats and in danger of being lost
- To represent these models in a declarative XML-based
...
Programme: SynthSys
Public web page: Not specified
Organisms: Arabidopsis thaliana, Ostreococcus tauri
Collection of models submitted to PLaSMo by Daniel Seaton and automatically transferred to FAIRDOM Hub.
Snapshots: No snapshots
Studies: Arabidopsis - starch and the circadian clock, Model 1 (Seaton et al., 20..., Arabidopsis - starch and the circadian clock, Model 2 (Seaton et al., 20..., Arabidopsis - starch and the circadian clock, Model 3 (Seaton et al., 20..., Modelling circadian regulation of flowering time and hypocotyl elongatio...
Assays: Arabidopsis - starch and the circadian clock, Model 1 (Seaton et al., 20..., Arabidopsis - starch and the circadian clock, Model 2 (Seaton et al., 20..., Arabidopsis - starch and the circadian clock, Model 3 (Seaton et al., 20..., Modelling circadian regulation of flowering time and hypocotyl elongatio...
A model of the circadian regulation of starch turnover, as published in Seaton, Ebenhoeh, Millar, Pokhilko, "Regulatory principles and experimental approaches to the circadian control of starch turnover", J. Roy. Soc. Interface, 2013. This model is referred to as "Model Variant 3".
Related Publications
Seaton, Ebenhoeh, Millar, Pokhilko (2013). Regulatory principles and experimental approaches to the circadian control of starch turnover. Journal of
...
Contributor: BioData SynthSys
Biological problem addressed: Gene Regulatory Network
Snapshots: No snapshots
Investigation: Seaton, Daniel
Study: Arabidopsis - starch and the circadian clock, M...
Organisms: No organisms
Models: Arabidopsis - starch and the circadian clock, M..., Arabidopsis - starch and the circadian clock, M...
SOPs: No SOPs
Data files: Copasi version of model, PLM_79_ 1
Data file for PLaSMo accesssion ID PLM_79, version 1
Creators: BioData SynthSys, Daniel Seaton
Contributor: BioData SynthSys
Investigations: Seaton, Daniel
Originally submitted model file for PLaSMo accession ID PLM_79, version 1
Creators: BioData SynthSys, Daniel Seaton
Contributor: BioData SynthSys
Model type: Not specified
Model format: SBML
Environment: Not specified
Organism: Not specified
Investigations: Seaton, Daniel
Studies: Arabidopsis - starch and the circadian clock, M...
Modelling analyses: Arabidopsis - starch and the circadian clock, M...
Simplified model file for PLaSMo accession ID PLM_79, version 1 (use simplified if your software cannot read the file, e.g. Sloppy Cell)
Creators: BioData SynthSys, Daniel Seaton
Contributor: BioData SynthSys
Model type: Not specified
Model format: SBML
Environment: Not specified
Organism: Not specified
Investigations: Seaton, Daniel
Studies: Arabidopsis - starch and the circadian clock, M...
Modelling analyses: Arabidopsis - starch and the circadian clock, M...