Extending Eulerian Parameter Inference to Single Cell Data

The German Network for Bioinformatics Infrastructure - de.NBI offers first class bioinformatics services including training and education to users in basic and applied life sciences research. In this network 40 projects belonging to eight service centers provide services that cover a wide variety of methods (genomics, proteomics, ...) and applications (from plants to humans). de.NBI-SysBio is the Systems Biology Service Center of de.NBI. In collaboration with FAIRDOM, de.NBI-SysBio serves the ...

The group around Nicole Radde specializes in the modeling, analysis, and simulation of biochemical systems. This especially includes parameter optimization and identification.

There are three files:

• executable.py
• functions.py
• plots.py

The first file leads you through my data creation and processing step by step. You can choose how many of my data you want to use or reproduce by yourself.

The executable-file needs the functions from "functions" and "plots" in order to run correctly.

This contains the final version of my thesis as well as the implemented figures as .pgf and .svg files.