Assays

What is an Assay?

181 Assays visible to you, out of a total of 181

Antibody Dependent Functional Profiling - Data Linked

Hi-IMPAcTB

Antibody Dependent Functional Profiling* and Analysis Represents:

ADMP: Macrophage Phagocytosis

ADNP: Neutrophil Phagocytosis

ADDCP: Dendritic Cell Phagocytosis

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: P.ALT-241105-V1_Protocol_phagocytic_assays_BM_c...

Data files: samples-publish_PG_AB.xlsx, samples-publish_PG_CEL.xlsx, samples-publish_PG_D.ADFP.xlsx

Snapshots: No snapshots

Created: 22nd Apr 2025 at 18:22, Last updated: 23rd Apr 2025 at 18:35

ADFP Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_PG_A.ADFP.xlsx, samples-publish_PG_D.ADFP.xlsx

Snapshots: No snapshots

Created: 22nd Apr 2025 at 18:23, Last updated: 23rd Apr 2025 at 18:35

Single Cell Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_PG_A.SCXP.xlsx, samples-publish_PG_D.SEQ.xlsx

Snapshots: No snapshots

Created: 22nd Apr 2025 at 18:15, Last updated: 23rd Apr 2025 at 18:35

Single Cell Clustering - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: P.ALT-250314-V1_Analysis-of-infection-scRNA.docx

Data files: samples-publish_PG_A.SCCL.xlsx, samples-publish_PG_A.SCXP.xlsx

Snapshots: No snapshots

Created: 22nd Apr 2025 at 18:16, Last updated: 23rd Apr 2025 at 18:35

Western Blot - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: No SOPs

Data files: samples-publish_PG_AB.xlsx

Snapshots: No snapshots

Created: 22nd Apr 2025 at 18:19, Last updated: 23rd Apr 2025 at 18:35

Flow Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: P.ALT-241112-V1_Protocol_flow_staining.docx

Data files: samples-publish_PG_AB.xlsx, samples-publish_PG_ABP.xlsx, samples-publish_PG_CEL.xlsx, samples-publish_PG_D.FCS.xlsx, samples-publish_PG_D.FLOW.xlsx

Snapshots: No snapshots

Created: 7th Apr 2022 at 21:03, Last updated: 23rd Apr 2025 at 18:35

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: P.ALT-250314-V1_scRNA_PG.docx

Data files: samples-publish_PG_CEL.xlsx, samples-publish_PG_D.SEQ.xlsx

Snapshots: No snapshots

Created: 22nd Apr 2025 at 18:14, Last updated: 23rd Apr 2025 at 18:35

Cell Sorting – Data Linked

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: P.ALT-241105-V1_Protocol_phagocytic_assays_BM_c..., P.ALT-250418-V1_Protocol_mtb_restriction_assay_...

Data files: samples-publish_PG_AB.xlsx, samples-publish_PG_BAC.xlsx, samples-publish_PG_CEL.xlsx, samples-publish_PG_D.FLOW.xlsx

Snapshots: No snapshots

Created: 24th Mar 2022 at 19:56, Last updated: 23rd Apr 2025 at 18:35

Mouse Challenge – Metadata

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Antibody-Fab and -Fc features promote Mycobacte...

Organisms: No organisms

SOPs: P.ALT-241112-V1_Antibody_cloning_and_expression..., P.ALT-241112-V1_Bacterial_Strains, P.ALT-241112-V1_Protocol_flow_staining.docx

Data files: samples-publish_PG_AB.xlsx, samples-publish_PG_BAC.xlsx, samples-publish_PG_MUS.xlsx

Snapshots: No snapshots

Created: 14th Mar 2022 at 17:10, Last updated: 23rd Apr 2025 at 18:35

Single Cell Clustering Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Fc-engineered antibodies leverage neutrophils t...

Organisms: No organisms

SOPs: P.ALT-240411-V1_Fc-engineering-scRNAseq-Protoco...

Data files: samples-publish2024-06-04-A.SCCL.xlsx, samples-publish2024-06-04-A.SCXP.xlsx

Snapshots: No snapshots

Created: 4th Jun 2024 at 19:05, Last updated: 23rd Apr 2025 at 18:14

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Specific CD4+ T cell phenotypes associate with ...

Organisms: No organisms

SOPs: P.BOO-230324-V1_KC_Protocol

Data files: PAT-samples-publish-2024-05-21_13-17.xlsx, PAT-samples-publish2023-05-17_13-17.xlsx, PAV-samples-publish-2024-05-21_13-27.xlsx, PAV-samples-publish2023-05-17_13-27.xlsx

Snapshots: No snapshots

Created: 15th May 2023 at 20:19, Last updated: 15th Apr 2025 at 16:27

Flow Cytometry Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Specific CD4+ T cell phenotypes associate with ...

Organisms: No organisms

SOPs: No SOPs

Data files: A.FLOW-samples-publish2023-05-17_15-39.xlsx, D.FLOW-samples-publish-2024-05-21_11-32.xlsx, D.FLOW-samples-publish2023-06-01_11-32.xlsx

Snapshots: No snapshots

Created: 17th May 2023 at 18:17, Last updated: 15th Apr 2025 at 16:23

Patient Visit – Metadata

Hi-IMPAcTB

No description specified

Submitter: Dikshant Pradhan

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Immune cells in bronchoalveolar lavage fluid of...

Organisms: No organisms

SOPs: P.BOO-230324-V1_2016_Nov_04_Bronchoscopy_Protoc..., P.BOO-230324-V1_2018_June_Bronchoscopy_Protocol..., P.BOO-230324-V1_2019_April_Bronchoscopy_Protoco..., P.BOO-230324-V1_2020_Jan_Bronchoscopy_Protocol_..., P.BOO-230324-V1_KC_Protocol

Data files: PAT-samples-publish2023-03-27_16-07.xlsx, PAV-samples-publish2023-03-27_16-19.xlsx

Snapshots: Snapshot 1

Created: 18th Oct 2021 at 14:23, Last updated: 14th Apr 2025 at 18:26

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Immune cells in bronchoalveolar lavage fluid of...

Organisms: No organisms

Data files: PAV-samples-publish2023-03-27_16-19.xlsx, TIS-samples-publish2023-03-27_16-27.xlsx

Snapshots: No snapshots

Created: 27th Mar 2023 at 21:03, Last updated: 14th Apr 2025 at 18:26

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FLY-210708-V1_Hannah's-GentleMacs-Protocol-as..., P.FLY-231011_Patient Visit CD8

Data files: PAV-2-samples-publish2023-10-11_13-11.xlsx, TIS-samples-publish2023-10-11_14-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:45, Last updated: 14th Apr 2025 at 18:15

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: CD8+ lymphocytes are critical for early control...

Organisms: No organisms

SOPs: P.FLY-220823-V1_P---NHP_housing.docx, P.FLY-231011_Patient Visit CD8

Data files: AB-samples-publish2023-10-11_13-30.xlsx, BAC-samples-publish2023-10-11_13-48.xlsx, NHP-samples-publish2023-10-11_12-59.xlsx, PAV-2-samples-publish2023-10-11_13-11.xlsx

Snapshots: No snapshots

Created: 11th Oct 2023 at 16:43, Last updated: 14th Apr 2025 at 18:14

Mass Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: IFN-γ- GranzymeB + Natural killer cells are ind...

Organisms: No organisms

SOPs: P.SED-241121-V1_Mass-Cytometry-Protocol.docx

Data files: samples-publish_250327_AB.xlsx, samples-publish_250327_ABP.xlsx, samples-publish_250327_D.CYTOF.xlsx, samples-publish_250327_TIS.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:51, Last updated: 28th Mar 2025 at 21:51

Mass Cytometry Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: IFN-γ- GranzymeB + Natural killer cells are ind...

Organisms: No organisms

SOPs: P.SED-241121-V1_Mass-Cytometry-Protocol.docx

Data files: samples-publish_250327_A.CYTOF.xlsx, samples-publish_250327_D.CYTOF.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:52, Last updated: 28th Mar 2025 at 21:51

Flow Cytometry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: IFN-γ- GranzymeB + Natural killer cells are ind...

Organisms: No organisms

SOPs: P.SED-241121-V1_Flow-Cytometry-Protocol.docx

Data files: samples-publish_250327_AB.xlsx, samples-publish_250327_ABP.xlsx, samples-publish_250327_D.FCS.xlsx, samples-publish_250327_D.FLOW.xlsx, samples-publish_250327_TIS.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:48, Last updated: 28th Mar 2025 at 21:46

Flow Cytometry Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: IFN-γ- GranzymeB + Natural killer cells are ind...

Organisms: No organisms

SOPs: P.SED-241121-V1_Flow-Cytometry-Protocol.docx

Data files: samples-publish_250327_A.FLOW.xlsx, samples-publish_250327_D.FLOW.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:49, Last updated: 28th Mar 2025 at 21:41

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: IFN-γ- GranzymeB + Natural killer cells are ind...

Organisms: No organisms

SOPs: P.SED-241121-V1_Sample-Processing-Protocol.docx

Data files: samples-publish_250327_PAV.xlsx, samples-publish_250327_TIS.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:37, Last updated: 28th Mar 2025 at 18:51

Patient Visit - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: IFN-γ- GranzymeB + Natural killer cells are ind...

Organisms: No organisms

SOPs: P.SED-241121-V1_NHP-Protocol.docx, P.SED-241121-V1_Sample-Processing-Protocol.docx

Data files: samples-publish_250327_NHP.xlsx, samples-publish_250327_PAV.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:35, Last updated: 28th Mar 2025 at 18:47

All Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: No SOPs

Data files: Systematic Granuloma - All Metadata_v1.xlsx

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:10, Last updated: 28th Mar 2025 at 17:26

Single Cell Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-250325-V1_systematic_SEQ_analysis.docx

Data files: samples-publish_250326_A.SCXP.xlsx, samples-publish_250326_D.SEQ.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:39, Last updated: 28th Mar 2025 at 17:24

Gene Expression Analysis - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-250325-V1_systematic_SEQ_analysis.docx

Data files: samples-publish_250326_A.GEX.xlsx, samples-publish_250326_D.SEQ.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:40, Last updated: 28th Mar 2025 at 17:18

Short Read Sequencing - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-241219-V1_HMDM-Protocol.docx, P.BRY-250327-V1_scRNAseq.docx

Data files: samples-publish_250326_D.SEQ.xlsx, samples-publish_250326_DNA.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:38, Last updated: 28th Mar 2025 at 17:10

Immunohistochemistry - Data Linked

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 28th Mar 2025 at 17:08

Library Creation - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-241219-V1_HMDM-Protocol.docx, P.BRY-250327-V1_scRNAseq.docx

Data files: samples-publish_250326_CEL.xlsx, samples-publish_250326_DNA.xlsx, samples-publish_250326_TIS.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:37, Last updated: 28th Mar 2025 at 17:06

Cell Isolation - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-241219-V1_HMDM-Protocol.docx

Data files: samples-publish_250326_CEL.xlsx, samples-publish_250326_TIS.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:35, Last updated: 28th Mar 2025 at 17:00

Tissue Collection - Metadata

Hi-IMPAcTB

No description specified

Submitter: Charles Demurjian

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: IMPAcTB

Study: Systematic deconstruction of myeloid cell signa...

Organisms: No organisms

SOPs: P.BRY-241219-V1_HMDM-Protocol.docx, P.BRY-250327-V1_NHP_Protocol.docx

Data files: samples-publish_250326_PAV.xlsx, samples-publish_250326_TIS.xlsx

Snapshots: No snapshots

Created: 25th Mar 2025 at 20:34, Last updated: 28th Mar 2025 at 16:55