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Dynamic model of glycolysis, pyruvate metabolism and NoxE. The model is parameterized by selecting the best out of 100 parameter set using Copasi's Genetic algorithm with 1000 itterations and 500 simmulatanious models.
Creator: Niels Zondervan
Submitter: Niels Zondervan
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: Not specified
DownloadCreator: Niels Zondervan
Submitter: Niels Zondervan
Model type: Metabolic network
Model format: SBML
Environment: JWS Online
Core model with the addition of a NoxE reaction to regenerate NAD using O2. COPASI’s build in Evolutionary programming algorithm was used to estimate parameters using a maximum of 2000 generations with a population size of 100 models with value scaling as weights to train the 5 parameters of the NoxE reaction.
Creator: Niels Zondervan
Submitter: Niels Zondervan
Model type: Not specified
Model format: Copasi
Environment: Copasi
