Steffen Waldherr
SEEK ID: https://fairdomhub.org/people/589
Location:
Germany
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Microbial strains used in biotechnological industry need to produce their biotechnological products at high yield and at the same time they are desired to be robust to the intrinsic nutrient dynamics of large-scale bioreactors, most noticeably to transient limitations of carbon sources and oxygen. The engineering principles for robustness of metabolism to nutrient dynamics are however not yet well understood. The ROBUSTYEAST project aims to reveal these principles for microbial strain improvement
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Programme: ERASysAPP
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A small model representing the core carbon network in each cell. For more detail on the model creation see [1]. The model is written in SBML using the RAM extension for use in deFBA. Compatible python software for simulation can be found at https://tinyurl.com/yy8xu4v7
[1] S. Waldherr, D. A. Oyarzún, A. Bockmayr. Dynamic optimization of metabolic networks coupled with gene expression. In: Journal of Theoretical Biology, 365(0): 469 - 485.
Creators: Henning Lindhorst, Steffen Waldherr
Contributor: Henning Lindhorst
Model type: Stoichiometric model
Model format: SBML
Environment: Not specified
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Abstract (Expand)
Authors: Henning Lindhorst, Sergio Lucia, Rolf Findeisen, Steffen Waldherr
Date Published: 13th Jun 2017
Journal: Not specified
