phenodata_20210107.txt Version 1
_p_SUSPHIRE/_I_T12_CuInducible/
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phenodata_20210107.txt
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SampleID SampleName Date_of_meassurement AssayID HexadecenalContent(a.u.) Hexadecen-1-olContent(a.u.) HexadecenylacetateContent(a.u.) GBCodesOfAgroinfConstructs(CSV) AgroinfiltrationOD Comments Exp1_1 "KATF,dCas-1" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 108711 12969066 2616568 "GB3897,GB2085,GB1203" 0.1 guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + 35s:dCas9EV Exp1_2 "KATF,dCas-2" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 144030 15798420 3751988 "GB3897,GB2085,GB1203" 0.1 guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + 35s:dCas9EV Exp1_3 "KATF,dCas-3" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 124260 15240931 4573221 "GB3897,GB2085,GB1203" 0.1 guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + 35s:dCas9EV Exp1_4 "KATF,P19-1" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 3360 39827 2932 "GB3897,GB1203" 0.1 guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + P19 Exp1_5 "KATF,P19-2" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 5627 40024 4148 "GB3897,GB1203" 0.1 guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + P19 Exp1_6 "KATF,P19-3" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 2153 20355 1827 "GB3897,GB1203" 0.1 guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + P19 Exp1_7 "KEaD,dCas-1" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 43405 4279471 151173 "GB3896,GB2085,GB1203" 0.1 guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + 35s:dCas9EV Exp1_8 "KEaD,dCas-2" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 58390 5966324 226838 "GB3896,GB2085,GB1203" 0.1 guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + 35s:dCas9EV Exp1_9 "KEaD,dCas-3" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 18271 1091794 109371 "GB3896,GB2085,GB1203" 0.1 guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + 35s:dCas9EV Exp1_10 "KEaD,P19-1" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 3890 141711 10717 "GB3896,GB1203" 0.1 guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + P19 Exp1_11 "KEaD,P19-2" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 3628 39652 3420 "GB3896,GB1203" 0.1 guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + P19 Exp1_12 "KEaD,P19-3" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 4146 55380 6511 "GB3896,GB1203" 0.1 guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + P19 Exp1_13 "C,g1-1" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 94346 10244171 188870 "GB3553,GB3554,GB2085,GB3553,GB3554,GB2515,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+g1 Exp1_14 "C,g1-2" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 113185 13349145 234708 "GB3553,GB3554,GB2085,GB3553,GB3554,GB2515,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+g1 Exp1_15 "C,g1-3" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 77130 8173175 274000 "GB3553,GB3554,GB2085,GB3553,GB3554,GB2515,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+g1 Exp1_16 "C,gX-1" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 2671 27056 2555 "GB3553,GB3554,GB2085,GB3553,GB3554,GB1725,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+gX Exp1_17 "C,gX-2" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 9421 393548 19248 "GB3553,GB3554,GB2085,GB3553,GB3554,GB1725,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+gX Exp1_18 "C,gX-3" 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 3427 28309 2256 "GB3553,GB3554,GB2085,GB3553,GB3554,GB1725,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+gX Exp1_19 SxP11-1 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 25494 1171396 119261 "GB3539,GB1203" 0.1 Constitutive expression (SxPv1.1 construct) Exp1_20 SxP11-2 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 27292 1084918 94791 "GB3539,GB1203" 0.1 Constitutive expression (SxPv1.1 construct) Exp1_21 SxP11-3 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 16953 782381 55895 "GB3539,GB1203" 0.1 Constitutive expression (SxPv1.1 construct) Exp1_22 P19-1 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 0 0 0 GB1203 0.1 Negative control (Agroinfiltrated with only P19) Exp1_23 P19-2 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 0 0 0 GB1203 0.1 Negative control (Agroinfiltrated with only P19) Exp1_24 P19-3 19/01/2021 _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS 0 0 0 GB1203 0.1 Negative control (Agroinfiltrated with only P19) Exp2_1 P1_1 26/01/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 6.30E+04 1.14E+06 9.58E+03 "GB2085,GB2515,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + dCas9EV+g1 Exp2_2 P1_2 03/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 2.26E+04 2.13E+06 8.83E+04 "GB2085,GB2515,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + dCas9EV+g1 Exp2_3 P1_3 05/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 3.61E+04 4.12E+06 7.32E+04 "GB2085,GB2515,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + dCas9EV+g1 Exp2_4 P2_1 26/01/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 2.73E+04 4.39E+04 1.60E+03 "GB2085,GB1725,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + dCas9EV+gX Exp2_5 P2_2 03/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 5.87E+03 4.80E+04 2.97E+03 "GB2085,GB1725,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + dCas9EV+gX Exp2_6 P2_3 05/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 9.06E+04 7.76E+03 1.58E+03 "GB2085,GB1725,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + dCas9EV+gX Exp2_7 P5_1 26/01/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 7.40E+04 4.05E+06 3.90E+06 "GB2085,GB2515,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + dCas9EV+g1 Exp2_8 P5_2 03/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 4.23E+04 7.53E+06 5.82E+06 "GB2085,GB2515,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + dCas9EV+g1 Exp2_9 P5_3 05/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 4.91E+04 6.46E+06 3.00E+06 "GB2085,GB2515,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + dCas9EV+g1 Exp2_10 P6_1 26/01/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 1.55E+04 2.83E+05 5.82E+04 "GB2085,GB1725,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + dCas9EV+gX Exp2_11 P6_2 03/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 5.64E+03 1.09E+05 2.45E+04 "GB2085,GB1725,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + dCas9EV+gX Exp2_12 P6_3 05/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 1.51E+04 1.14E+05 2.73E+04 "GB2085,GB1725,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + dCas9EV+gX Exp2_13 P9_1 26/01/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 2.89E+04 4.63E+06 1.63E+04 "GB2085,GB2515,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+g1 Exp2_14 P9_2 03/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 1.82E+04 3.34E+06 4.11E+04 "GB2085,GB2515,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+g1 Exp2_15 P9_3 05/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 2.53E+04 2.89E+06 2.93E+04 "GB2085,GB2515,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+g1 Exp2_16 P10_1 26/01/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 4.65E+03 1.48E+05 1.42E+03 "GB2085,GB1725,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+gX Exp2_17 P10_2 03/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 5.55E+03 4.89E+04 2.42E+03 "GB2085,GB1725,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+gX Exp2_18 P10_3 05/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 1.24E+04 1.55E+05 1.13E+04 "GB2085,GB1725,GB1203" 0.1 AtrD11+HarFAR (in trans) +dCas9EV+gX Exp2_19 P11_1 26/01/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 0 0 0 GB1203 0.1 Negative control (Agroinfiltrated with only P19) Exp2_20 P11_2 03/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 0 0 0 GB1203 0.1 Negative control (Agroinfiltrated with only P19) Exp2_21 P11_3 05/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 0 0 0 GB1203 0.1 Negative control (Agroinfiltrated with only P19) Exp2_22 P12_1 26/01/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 1.77E+04 1.67E+06 1.69E+05 "GB3539,GB1203" 0.1 Constitutive expression (SxPv1.1 construct) Exp2_23 P12_2 03/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 1.01E+04 1.75E+06 3.11E+05 "GB3539,GB1203" 0.1 Constitutive expression (SxPv1.1 construct) Exp2_24 P12_3 05/05/2021 _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS 1.14E+04 1.76E+06 1.93E+05 "GB3539,GB1203" 0.1 Constitutive expression (SxPv1.1 construct) Exp3_1 P3_1 26/01/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.84E+04 1.35E+04 9.79E+02 "GB3891,GB4067,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + water Exp3_2 P3_2 03/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 4.66E+03 1.33E+04 1.27E+03 "GB3891,GB4067,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + water Exp3_3 P3_3 05/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 8.20E+01 9.50E+01 9.50E+01 "GB3891,GB4067,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + water Exp3_4 P4_1 26/01/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.51E+04 3.74E+05 2.63E+04 "GB3891,GB4067,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + copper Exp3_5 P4_2 03/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.08E+04 7.57E+05 1.34E+05 "GB3891,GB4067,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + copper Exp3_6 P4_3 05/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 3.80E+04 4.26E+05 3.56E+04 "GB3891,GB4067,GB1203" 0.1 non-guided pathway with EaDAct (AtrD11+HarFAR+EaDAct) + copper Exp3_7 P7_1 26/01/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.28E+04 5.80E+04 6.84E+03 "GB3892,GB4067,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + water Exp3_8 P7_2 03/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 4.25E+03 3.19E+04 1.46E+04 "GB3892,GB4067,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + water Exp3_9 P7_3 05/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.74E+04 3.93E+04 2.11E+04 "GB3892,GB4067,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + water Exp3_10 P8_1 26/01/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.47E+04 1.54E+06 6.84E+05 "GB3892,GB4067,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + copper Exp3_11 P8_2 03/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 9.30E+03 1.55E+06 1.08E+06 "GB3892,GB4067,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + copper Exp3_12 P8_3 05/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 2.36E+04 1.67E+06 6.95E+05 "GB3892,GB4067,GB1203" 0.1 non-guided pathway with ATF1 (AtrD11+HarFAR+ATF1) + copper Exp3_19 P11_1 26/01/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 0 0 0 GB1203 0.1 Same sample as for Exp2_19 Exp3_20 P11_2 03/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 0 0 0 GB1203 0.1 Same sample as for Exp2_20 Exp3_21 P11_3 05/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 0 0 0 GB1203 0.1 Same sample as for Exp2_21 Exp3_22 P12_1 26/01/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.77E+04 1.67E+06 1.69E+05 "GB3539,GB1203" 0.1 Same sample as for Exp2_22 Exp3_23 P12_2 03/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.01E+04 1.75E+06 3.11E+05 "GB3539,GB1203" 0.1 Same sample as for Exp2_23 Exp3_24 P12_3 05/05/2021 _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS 1.14E+04 1.76E+06 1.93E+05 "GB3539,GB1203" 0.1 Same sample as for Exp2_24 Exp4_1 P1_1 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 4054 558278 511827 "GB3898,GB4070,GB1203" 0.1 non-guided pathway + guided CBS:dCas9EV (+ Copper) Exp4_2 P1_2 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 4448 457325 397213 "GB3898,GB4070,GB1203" 0.1 non-guided pathway + guided CBS:dCas9EV (+ Copper) Exp4_3 P1_3 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 6989 1591256 1522451 "GB3898,GB4070,GB1203" 0.1 non-guided pathway + guided CBS:dCas9EV (+ Copper) Exp4_4 P2_1 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 1492 14781 5061 "GB3898,GB4070,GB1203" 0.1 non-guided pathway + guided CBS:dCas9EV (+ Water) Exp4_5 P2_2 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 1751 24920 7594 "GB3898,GB4070,GB1203" 0.1 non-guided pathway + guided CBS:dCas9EV (+ Water) Exp4_6 P2_3 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 2004 36007 12746 "GB3898,GB4070,GB1203" 0.1 non-guided pathway + guided CBS:dCas9EV (+ Water) Exp4_7 P3_1 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 4593 850565 322200 "GB3897,GB4068,GB1203" 0.1 guided pathway + non-guided CBS:dCas9EV (+ Copper) Exp4_8 P3_2 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 3943 480867 162189 "GB3897,GB4068,GB1203" 0.1 guided pathway + non-guided CBS:dCas9EV (+ Copper) Exp4_9 P3_3 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 4158 648459 227353 "GB3897,GB4068,GB1203" 0.1 guided pathway + non-guided CBS:dCas9EV (+ Copper) Exp4_10 P4_1 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 1450 16286 3914 "GB3897,GB4068,GB1203" 0.1 guided pathway + non-guided CBS:dCas9EV (+ Water) Exp4_11 P4_2 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 1637 22129 3120 "GB3897,GB4068,GB1203" 0.1 guided pathway + non-guided CBS:dCas9EV (+ Water) Exp4_12 P4_3 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 1606 18946 3557 "GB3897,GB4068,GB1203" 0.1 guided pathway + non-guided CBS:dCas9EV (+ Water) Exp4_13 P5_1 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 4877 963128 501972 "GB3898,GB4067,GB1203" 0.1 Control (+ Copper) Exp4_14 P5_2 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 5542 1041251 619908 "GB3898,GB4067,GB1203" 0.1 Control (+ Copper) Exp4_15 P5_3 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 5952 932134 641468 "GB3898,GB4067,GB1203" 0.1 Control (+ Copper) Exp4_16 P6_1 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 1963 30506 12693 "GB3898,GB4067,GB1203" 0.1 Control (+ Water) Exp4_17 P6_2 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 2041 41360 25582 "GB3898,GB4067,GB1203" 0.1 Control (+ Water) Exp4_18 P6_3 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 2223 49575 42109 "GB3898,GB4067,GB1203" 0.1 Control (+ Water) Exp4_19 P7_1 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 36940 9161939 10409720 "GB2085,GB2515,GB1203" 0.1 non-guided pathway + constitutive dCas9EV (+guideRNA1) Exp4_20 P7_2 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 37265 11001601 13696332 "GB2085,GB2515,GB1203" 0.1 non-guided pathway + constitutive dCas9EV (+guideRNA1) Exp4_21 P7_3 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 29622 8321613 9777113 "GB2085,GB2515,GB1203" 0.1 non-guided pathway + constitutive dCas9EV (+guideRNA1) Exp4_22 P8_1 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 3513 104593 64697 "GB2085,GB2515,GB1203" 0.1 non-guided pathway + constitutive dCas9EV (+guideRNAX) Exp4_23 P8_2 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 3174 92372 78322 "GB2085,GB2515,GB1203" 0.1 non-guided pathway + constitutive dCas9EV (+guideRNAX) Exp4_24 P8_3 03/05/2021 _A_AgroinfFinalConstructsdCas9EV-GCMS 2571 88765 78894 "GB2085,GB2515,GB1203" 0.1 non-guided pathway + constitutive dCas9EV (+guideRNAX)
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Created: 10th Jan 2022 at 11:11
Last updated: 7th Nov 2024 at 10:03
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Version 1 (earliest) Created 10th Jan 2022 at 11:11 by Marko Petek
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https://orcid.org/0000-0003-3644-7827PhD in Biotechnology, Research Associate at Department of Biotechnology and Systems Biology, National Institute of Biology
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National Institute of Biology, Department of Biotechnology and Systems Biology projects
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato, _p_RNAinVAL, tst, tst2, Playground
Web page: http://www.nib.si/eng/index.php/departments/department-of-biotechnology-and-systems-biology
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SUSPHIRE aims to provide a sustainable, low-cost biomanufacturing platform for the commercial production of insect pheromones.
Synthetic biology data management spreadsheet: https://fairdomhub.org/data_files/6036
Programme: NIBSys
Public web page: http://susphire.info/susphireproject/
Start date: 1st Apr 2018
End date: 30th Sep 2021
Advanced Investigations list for this Data file with search and filtering
Short Name: T12_CuInducible Title: Production and testing of copper inducible dCas9EV system for moth pheromone production Description: dCas9EV system used to activate the synthetic promoters made in T11 was coupled to a copper-inducible promoter made of CBS repeats and a minimal DFR promoter. Such system will be induced via CUP2 protein, which binds to CBS motif in presence of copper. This cascade-like system was tested for production of the moth pheromone pathway. Phenodata: ./phenodata_20210107.txt ...
Submitter: Marko Petek
Studies: Investigation files, _S_P1_TransientExp_Nb
Assays: _A_AgroinfFinalConstructsdCas9EV-GCMS, _A_AgroinfGuidedPathwaywithConstitutivedCas9EV-GCMS, _A_AgroinfNonGuidedPathwaywithCopperInducibledCas9EV-GCMS, _A_AgroinfNonGuidedPathwayywithConstitutivedCas9EV-GCMS, _I_T12_CuInducible-files, _S_P1_TransientExp_Nb-files
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Investigation files _I_T12_CuInducible
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Files connected to investigation: _I_T12_CuInducible
Submitter: Marko Petek
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: _I_T12_CuInducible
Study: Investigation files
