output/quast/Lactococcus/transposed_report.tsv
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_p_RNAinVAL/_I_03_Omics/_S_02_metagenome_resp/_A_06_extr_bact-assembly/

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Filename: output/quast/Lactococcus/transposed_report.tsv

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Assembly	# contigs (>= 0 bp)	# contigs (>= 1000 bp)	# contigs (>= 5000 bp)	# contigs (>= 10000 bp)	# contigs (>= 25000 bp)	# contigs (>= 50000 bp)	Total length (>= 0 bp)	Total length (>= 1000 bp)	Total length (>= 5000 bp)	Total length (>= 10000 bp)	Total length (>= 25000 bp)	Total length (>= 50000 bp)	# contigs	Largest contig	Total length	GC (%)	N50	N75	L50	L75	# total reads	# left	# right	Mapped (%)	Properly paired (%)	Avg. coverage depth	Coverage >= 1x (%)	# N's per 100 kbp	Complete BUSCO (%)	Partial BUSCO (%)	# predicted genes (unique)	# predicted genes (>= 0 bp)	# predicted genes (>= 300 bp)	# predicted genes (>= 1500 bp)	# predicted genes (>= 3000 bp)	# predicted rRNA genes
spades	245	139	60	38	27	13	2541749	2482734	2317176	2162610	1981093	1476297	242	256070	2541371	34.97	69806	27770	10	25	182073123	91023201	91023201	99.69	98.29	10684	100.0	0.00	97.30	0.00	952	949 + 3 part	900 + 3 part	346 + 0 part	88 + 0 part	7 + 0 part

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