/output/trueSingle.DM.cds_kreport.txt Version 1
_p_stRT/_I_STRT/_S_04_stPanTr/_A_08_centrifuge_3cvs-GFFmerged
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output/trueSingle.DM.cds_kreport.txt
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10.55 1799 1799 U 0 unclassified 89.45 15252 3 - 1 root 89.43 15248 9 - 131567 cellular organisms 89.09 15191 35 D 2759 Eukaryota 87.49 14918 0 K 33090 Viridiplantae 87.48 14916 6 P 35493 Streptophyta 87.44 14909 0 - 131221 Streptophytina 87.44 14909 0 - 3193 Embryophyta 87.43 14908 0 - 58023 Tracheophyta 87.43 14908 0 - 78536 Euphyllophyta 87.43 14908 0 - 58024 Spermatophyta 87.43 14908 0 - 3398 Magnoliophyta 87.42 14906 7 - 1437183 Mesangiospermae 87.26 14878 1 - 71240 eudicotyledons 87.23 14873 0 - 91827 Gunneridae 87.23 14873 19 - 1437201 Pentapetalae 86.63 14771 3 - 71274 asterids 86.58 14762 3 - 91888 lamiids 86.48 14745 1 O 4069 Solanales 86.46 14742 18 F 4070 Solanaceae 85.60 14595 11 - 424551 Solanoideae 84.85 14468 0 - 424574 Solaneae 84.85 14468 12 G 4107 Solanum 46.67 7958 7957 S 4113 Solanum tuberosum 0.01 1 1 - 80418 Solanum tuberosum subsp. andigenum 37.11 6327 856 - 49274 Lycopersicon 20.43 3484 3484 S 28526 Solanum pennellii 11.59 1977 1977 S 4081 Solanum lycopersicum 0.02 3 3 S 4084 Solanum pimpinellifolium 0.02 3 3 S 62890 Solanum habrochaites 0.02 3 3 S 73101 Solanum sp. VFNT 0.01 1 1 S 4082 Solanum peruvianum 0.72 123 123 S 50514 Solanum demissum 0.11 18 18 S 147425 Solanum bulbocastanum 0.05 9 9 S 4109 Solanum commersonii 0.03 5 5 S 315347 Solanum verrucosum 0.02 3 3 S 172790 Solanum phureja 0.01 2 2 S 4108 Solanum chacoense 0.01 2 2 S 45834 Solanum dulcamara 0.01 2 2 S 172264 Solanum raphanifolium 0.01 2 2 S 742160 Solanum x edinense 0.01 1 1 S 47970 Solanum berthaultii 0.01 1 1 S 50511 Solanum carolinense 0.01 1 1 S 200525 Solanum etuberosum 0.01 1 1 S 267265 Solanum aculeatissimum 0.01 1 1 S 744720 Solanum sp. StS-2010a 0.65 111 0 - 424564 Capsiceae 0.65 111 2 G 4071 Capsicum 0.64 109 109 S 4072 Capsicum annuum 0.01 2 0 - 424569 Lycieae 0.01 2 0 G 24646 Lycium 0.01 1 1 S 112863 Lycium barbarum 0.01 1 1 S 112883 Lycium chinense 0.01 2 0 - 424573 Physaleae 0.01 1 0 G 24663 Physalis 0.01 1 1 S 304155 Physalis heterophylla 0.01 1 0 G 304104 Iochroma 0.01 1 1 S 362357 Iochroma cyaneum 0.01 1 0 - 424566 Hyoscyameae 0.01 1 0 G 4078 Hyoscyamus 0.01 1 1 S 4079 Hyoscyamus niger 0.74 127 0 - 424554 Nicotianoideae 0.74 127 0 - 424562 Nicotianeae 0.74 127 69 G 4085 Nicotiana 0.15 25 25 S 49451 Nicotiana attenuata 0.08 14 14 S 4097 Nicotiana tabacum 0.06 11 11 S 4098 Nicotiana tomentosiformis 0.03 5 5 S 4096 Nicotiana sylvestris 0.01 1 1 S 4091 Nicotiana otophora 0.01 1 1 S 35889 Nicotiana glutinosa 0.01 1 1 S 118696 Nicotiana forgetiana 0.01 1 0 - 424555 Petunioideae 0.01 1 0 G 4101 Petunia 0.01 1 1 S 4102 Petunia x hybrida 0.01 1 0 - 1159853 unclassified Solanaceae 0.01 1 1 S 1520274 Nicotiana tabacum/Hyoscyamus niger cybrid 0.01 2 0 F 4118 Convolvulaceae 0.01 2 0 - 267213 Ipomoeeae 0.01 2 0 G 4119 Ipomoea 0.01 2 2 S 35883 Ipomoea nil 0.06 10 1 O 4143 Lamiales 0.02 4 0 F 4144 Oleaceae 0.02 4 1 - 426106 Oleeae 0.01 2 0 G 4145 Olea 0.01 2 0 S 4146 Olea europaea 0.01 2 0 - 158383 Olea europaea subsp. europaea 0.01 2 2 - 158386 Olea europaea var. sylvestris 0.01 1 0 G 126359 Chionanthus 0.01 1 1 S 2057972 Chionanthus rupicola 0.01 2 0 F 4136 Lamiaceae 0.01 2 0 - 216703 Lamioideae 0.01 1 0 - 983531 Pogostemoneae 0.01 1 1 G 21861 Pogostemon 0.01 1 0 - 983547 Lamieae 0.01 1 0 G 53158 Lamium 0.01 1 0 S 53161 Lamium galeobdolon 0.01 1 1 - 1080048 Lamium galeobdolon subsp. flavidum 0.01 1 0 F 4196 Lentibulariaceae 0.01 1 0 G 13747 Utricularia 0.01 1 1 S 13748 Utricularia gibba 0.01 1 0 F 24079 Bignoniaceae 0.01 1 0 - 423302 Bignonieae 0.01 1 0 G 353917 Adenocalymma 0.01 1 1 S 2056444 Adenocalymma allamandiflorum 0.01 1 0 F 91896 Orobanchaceae 0.01 1 0 - 216770 Orobancheae 0.01 1 0 G 87753 Cistanche 0.01 1 1 S 87754 Cistanche phelypaea 0.02 3 0 O 4055 Gentianales 0.01 2 0 F 4056 Apocynaceae 0.01 1 0 - 167483 Apocynoideae 0.01 1 0 - 167501 Echiteae 0.01 1 0 - 1498456 Pentalinoninae 0.01 1 0 G 141597 Pentalinon 0.01 1 1 S 141598 Pentalinon luteum 0.01 1 1 - 167487 Rauvolfioideae 0.01 1 0 F 24966 Rubiaceae 0.01 1 0 - 169620 Rubiaceae incertae sedis 0.01 1 0 - 169627 Coptosapelteae 0.01 1 0 G 83579 Coptosapelta 0.01 1 1 S 86988 Coptosapelta flavescens 0.01 1 0 O 1538097 Boraginales 0.01 1 0 F 1561073 Ehretiaceae 0.01 1 0 G 48522 Ehretia 0.01 1 1 S 163079 Ehretia acuminata 0.03 5 0 - 91882 campanulids 0.01 2 0 O 4199 Dipsacales 0.01 1 0 F 4200 Caprifoliaceae 0.01 1 0 G 49606 Lonicera 0.01 1 1 S 232617 Lonicera sp. Bergthorsson 0301 0.01 1 1 F 4206 Adoxaceae 0.01 2 0 O 4209 Asterales 0.01 2 0 F 4210 Asteraceae 0.01 2 0 - 102804 Asteroideae 0.01 1 0 - 102810 Anthemideae 0.01 1 0 - 886692 Cotulinae 0.01 1 0 G 99103 Soliva 0.01 1 1 S 457735 Soliva sessilis 0.01 1 0 - 911341 Heliantheae alliance 0.01 1 1 - 102814 Heliantheae 0.01 1 0 O 4036 Apiales 0.01 1 0 - 364270 Apiineae 0.01 1 0 F 4037 Apiaceae 0.01 1 0 - 241778 Apioideae 0.01 1 0 - 241789 Scandiceae 0.01 1 0 - 241799 Daucinae 0.01 1 0 G 4038 Daucus 0.01 1 0 S 1873447 Daucus sect. Daucus 0.01 1 0 S 4039 Daucus carota 0.01 1 1 - 79200 Daucus carota subsp. sativus 0.01 1 0 O 41945 Ericales 0.01 1 0 F 3623 Actinidiaceae 0.01 1 0 G 3624 Actinidia 0.01 1 1 S 3627 Actinidia deliciosa 0.46 79 2 - 71275 rosids 0.28 48 0 - 91835 fabids 0.13 23 0 O 72025 Fabales 0.13 23 0 F 3803 Fabaceae 0.13 22 2 - 3814 Papilionoideae 0.04 6 0 - 163729 Genisteae 0.04 6 0 G 3869 Lupinus 0.04 6 6 S 3871 Lupinus angustifolius 0.04 6 1 - 163742 Trifolieae 0.03 5 0 G 3877 Medicago 0.03 5 5 S 3880 Medicago truncatula 0.02 4 1 - 163735 Phaseoleae 0.01 1 0 G 3820 Cajanus 0.01 1 1 S 3821 Cajanus cajan 0.01 1 0 G 3846 Glycine 0.01 1 0 - 1462606 Soja 0.01 1 1 S 3847 Glycine max 0.01 1 1 G 3913 Vigna 0.01 2 0 - 163725 Dalbergieae 0.01 2 0 G 3817 Arachis 0.01 2 2 S 130454 Arachis ipaensis 0.01 2 0 - 163747 Loteae 0.01 2 0 G 3867 Lotus 0.01 2 2 S 34305 Lotus japonicus 0.01 1 0 - 3804 Caesalpinioideae 0.01 1 1 - 1963083 Cassia clade 0.08 14 0 O 71239 Cucurbitales 0.08 13 1 F 3650 Cucurbitaceae 0.06 10 0 - 1003877 Benincaseae 0.06 10 1 G 3655 Cucumis 0.05 9 9 S 3656 Cucumis melo 0.01 2 0 - 1003878 Cucurbiteae 0.01 2 0 G 3660 Cucurbita 0.01 2 2 S 3662 Cucurbita moschata 0.01 1 0 F 4310 Corynocarpaceae 0.01 1 0 G 4311 Corynocarpus 0.01 1 1 S 4312 Corynocarpus laevigatus 0.05 8 0 O 3646 Malpighiales 0.02 3 0 F 3688 Salicaceae 0.02 3 0 - 238069 Saliceae 0.02 3 2 G 3689 Populus 0.01 1 1 S 3694 Populus trichocarpa 0.02 3 1 F 3977 Euphorbiaceae 0.01 2 0 - 235631 Crotonoideae 0.01 1 0 - 235883 Manihoteae 0.01 1 0 G 3982 Manihot 0.01 1 1 S 3983 Manihot esculenta 0.01 1 0 - 235887 Jatropheae 0.01 1 0 G 720866 Deutzianthus 0.01 1 1 S 720867 Deutzianthus tonkinensis 0.01 1 1 F 22973 Chrysobalanaceae 0.01 1 0 F 125011 Bonnetiaceae 0.01 1 0 G 125014 Ploiarium 0.01 1 1 S 1241928 Ploiarium sp. CCD-2012 0.02 3 0 O 3744 Rosales 0.02 3 0 F 3745 Rosaceae 0.02 3 0 - 171637 Maloideae 0.01 2 0 - 721805 Amygdaleae 0.01 2 0 G 3754 Prunus 0.01 2 2 S 102107 Prunus mume 0.01 1 0 - 721813 Maleae 0.01 1 0 G 3749 Malus 0.01 1 1 S 3750 Malus domestica 0.15 25 2 - 91836 malvids 0.07 12 0 O 3699 Brassicales 0.07 12 1 F 3700 Brassicaceae 0.03 5 0 - 981070 Arabideae 0.03 5 0 G 50451 Arabis 0.03 5 5 S 50452 Arabis alpina 0.02 3 0 - 980083 Camelineae 0.01 2 0 G 3701 Arabidopsis 0.01 1 1 S 3702 Arabidopsis thaliana 0.01 1 0 S 59689 Arabidopsis lyrata 0.01 1 1 - 81972 Arabidopsis lyrata subsp. lyrata 0.01 1 0 G 71323 Camelina 0.01 1 1 S 90675 Camelina sativa 0.01 2 0 - 981071 Brassiceae 0.01 2 0 G 3705 Brassica 0.01 2 0 S 3711 Brassica rapa 0.01 2 2 - 51351 Brassica rapa subsp. pekinensis 0.01 1 0 - 981100 Eutremeae 0.01 1 0 G 98005 Eutrema 0.01 1 1 S 72664 Eutrema salsugineum 0.04 7 0 O 41938 Malvales 0.04 6 0 F 3629 Malvaceae 0.02 3 0 - 214909 Byttnerioideae 0.01 2 0 G 3640 Theobroma 0.01 2 2 S 3641 Theobroma cacao 0.01 1 0 G 108869 Herrania 0.01 1 1 S 108875 Herrania umbratica 0.01 2 0 - 214907 Malvoideae 0.01 2 0 G 3633 Gossypium 0.01 2 2 S 3635 Gossypium hirsutum 0.01 1 0 - 214908 Grewioideae 0.01 1 0 - 1563254 Apeibeae 0.01 1 0 G 93758 Corchorus 0.01 1 1 S 93759 Corchorus olitorius 0.01 1 0 F 39987 Thymelaeaceae 0.01 1 0 G 69465 Gonystylus 0.01 1 1 S 223761 Gonystylus bancanus 0.01 2 0 O 41943 Geraniales 0.01 2 0 F 4027 Geraniaceae 0.01 1 1 G 4030 Pelargonium 0.01 1 0 G 21566 Hypseocharis 0.01 1 1 S 253189 Hypseocharis bilobata 0.01 1 0 O 41937 Sapindales 0.01 1 0 F 23672 Sapindaceae 0.01 1 0 - 1977916 Hippocastanoideae 0.01 1 0 - 1977919 Acereae 0.01 1 0 G 43781 Dipteronia 0.01 1 1 S 168575 Dipteronia dyeriana 0.01 1 0 O 41944 Myrtales 0.01 1 0 F 3931 Myrtaceae 0.01 1 0 - 1699513 Myrtoideae 0.01 1 0 - 1699524 Eucalypteae 0.01 1 0 G 3932 Eucalyptus 0.01 1 1 S 71139 Eucalyptus grandis 0.02 4 0 - 91834 rosids incertae sedis 0.02 4 0 O 403667 Vitales 0.02 4 0 F 3602 Vitaceae 0.02 3 0 G 3603 Vitis 0.02 3 3 S 29760 Vitis vinifera 0.01 1 0 G 39207 Leea 0.01 1 1 S 39334 Leea guineensis 0.02 3 0 O 3524 Caryophyllales 0.02 3 0 F 1804623 Chenopodiaceae 0.01 2 0 - 1307796 Chenopodioideae 0.01 2 0 - 1307775 Anserineae 0.01 2 0 G 3561 Spinacia 0.01 2 2 S 3562 Spinacia oleracea 0.01 1 0 - 1804621 Betoideae 0.01 1 0 G 3554 Beta 0.01 1 1 S 161934 Beta vulgaris 0.01 1 0 O 41946 Saxifragales 0.01 1 0 F 3781 Crassulaceae 0.01 1 0 G 23012 Kalanchoe 0.01 1 1 S 23013 Kalanchoe daigremontiana 0.02 4 0 - 71241 early-diverging eudicotyledons 0.02 3 0 O 232378 Proteales 0.02 3 0 F 4429 Nelumbonaceae 0.02 3 0 G 4430 Nelumbo 0.02 3 3 S 4432 Nelumbo nucifera 0.01 1 0 O 41768 Ranunculales 0.01 1 0 F 3440 Ranunculaceae 0.01 1 0 - 1463138 Ranunculoideae 0.01 1 1 - 1463139 Adonideae 0.12 20 0 C 4447 Liliopsida 0.11 18 0 - 1437197 Petrosaviidae 0.06 11 0 - 4734 commelinids 0.05 9 0 O 38820 Poales 0.05 9 0 F 4479 Poaceae 0.05 9 0 - 359160 BOP clade 0.03 5 0 - 147368 Pooideae 0.03 5 0 - 1648038 Triticodae 0.03 5 0 - 147389 Triticeae 0.03 5 0 - 1648030 Triticinae 0.02 3 0 G 4564 Triticum 0.02 3 3 S 4565 Triticum aestivum 0.01 2 0 G 4480 Aegilops 0.01 2 1 S 37682 Aegilops tauschii 0.01 1 1 - 169297 Aegilops tauschii subsp. tauschii 0.02 4 0 - 147367 Oryzoideae 0.02 4 0 - 147380 Oryzeae 0.02 4 0 - 1648021 Oryzinae 0.02 4 4 G 4527 Oryza 0.01 2 0 O 4618 Zingiberales 0.01 1 0 F 4637 Musaceae 0.01 1 0 G 4640 Musa 0.01 1 0 S 4641 Musa acuminata 0.01 1 1 - 214687 Musa acuminata subsp. malaccensis 0.01 1 0 F 4642 Zingiberaceae 0.01 1 0 G 99568 Curcuma 0.01 1 1 S 136217 Curcuma longa 0.02 3 0 O 4667 Liliales 0.01 1 0 F 4677 Liliaceae 0.01 1 0 G 16047 Clintonia 0.01 1 1 S 44106 Clintonia uniflora 0.01 1 0 F 4703 Smilacaceae 0.01 1 0 G 49656 Smilax 0.01 1 1 S 49657 Smilax china 0.01 1 0 F 147240 Corsiaceae 0.01 1 0 G 179147 Arachnitis 0.01 1 1 S 191246 Arachnitis uniflora 0.02 3 0 O 73496 Asparagales 0.01 2 0 F 4747 Orchidaceae 0.01 2 0 - 158332 Epidendroideae 0.01 2 0 - 158393 Malaxideae 0.01 2 0 - 158406 Dendrobiinae 0.01 2 0 G 37818 Dendrobium 0.01 2 2 S 142615 Dendrobium officinale 0.01 1 0 F 40552 Asparagaceae 0.01 1 0 - 703533 Asparagoideae 0.01 1 0 G 4685 Asparagus 0.01 1 1 S 4686 Asparagus officinalis 0.01 1 0 O 40550 Pandanales 0.01 1 0 F 25913 Cyclanthaceae 0.01 1 0 G 101610 Cyclanthus 0.01 1 1 S 101611 Cyclanthus bipartitus 0.01 2 1 O 16360 Alismatales 0.01 1 0 F 4454 Araceae 0.01 1 0 - 284551 Lemnoideae 0.01 1 0 G 4473 Spirodela 0.01 1 1 S 29656 Spirodela polyrhiza 0.01 1 0 - 232347 Magnoliidae 0.01 1 0 O 16736 Piperales 0.01 1 0 F 16739 Piperaceae 0.01 1 0 G 13196 Peperomia 0.01 1 1 S 69414 Peperomia obtusifolia 0.01 2 0 - 232365 basal Magnoliophyta 0.01 2 0 O 261009 Amborellales 0.01 2 0 F 22097 Amborellaceae 0.01 2 0 G 13332 Amborella 0.01 2 2 S 13333 Amborella trichopoda 0.01 1 0 - 3208 Bryophyta 0.01 1 0 - 404260 Bryophytina 0.01 1 0 C 3214 Bryopsida 0.01 1 0 - 114656 Funariidae 0.01 1 0 O 3215 Funariales 0.01 1 0 F 3216 Funariaceae 0.01 1 0 G 3217 Physcomitrella 0.01 1 1 S 3218 Physcomitrella patens 0.01 1 0 C 96475 Mesostigmatophyceae 0.01 1 0 O 160439 Mesostigmatales 0.01 1 0 F 35428 Mesostigmataceae 0.01 1 0 G 41881 Mesostigma 0.01 1 1 S 41882 Mesostigma viride 0.01 2 0 P 3041 Chlorophyta 0.01 2 0 - 3152 prasinophytes 0.01 2 0 C 1035538 Mamiellophyceae 0.01 2 0 O 13792 Mamiellales 0.01 2 0 F 1525212 Bathycoccaceae 0.01 1 0 G 41874 Bathycoccus 0.01 1 1 S 41875 Bathycoccus prasinos 0.01 1 0 G 70447 Ostreococcus 0.01 1 0 S 242159 Ostreococcus 'lucimarinus' 0.01 1 1 - 436017 Ostreococcus lucimarinus CCE9901 1.33 226 7 - 33154 Opisthokonta 1.11 189 0 K 33208 Metazoa 1.10 188 0 - 6072 Eumetazoa 1.09 186 4 - 33213 Bilateria 0.66 112 0 - 33511 Deuterostomia 0.65 111 0 P 7711 Chordata 0.65 111 0 - 89593 Craniata 0.65 111 0 - 7742 Vertebrata 0.65 111 0 - 7776 Gnathostomata 0.65 110 0 - 117570 Teleostomi 0.65 110 3 - 117571 Euteleostomi 0.45 76 0 - 8287 Sarcopterygii 0.44 75 0 - 1338369 Dipnotetrapodomorpha 0.44 75 0 - 32523 Tetrapoda 0.41 70 1 - 32524 Amniota 0.32 54 0 C 40674 Mammalia 0.32 54 0 - 32525 Theria 0.32 54 0 - 9347 Eutheria 0.30 51 0 - 1437010 Boreoeutheria 0.15 26 0 - 314145 Laurasiatheria 0.13 22 1 - 91561 Cetartiodactyla 0.11 18 0 - 9845 Ruminantia 0.11 18 1 - 35500 Pecora 0.10 17 0 F 9895 Bovidae 0.09 16 0 - 9963 Caprinae 0.09 16 0 G 9935 Ovis 0.09 16 0 S 37174 Ovis canadensis 0.09 16 16 - 112262 Ovis canadensis canadensis 0.01 1 0 - 27592 Bovinae 0.01 1 0 G 9918 Bubalus 0.01 1 1 S 89462 Bubalus bubalis 0.01 2 0 - 35497 Suina 0.01 2 0 F 9821 Suidae 0.01 2 0 G 9822 Sus 0.01 2 2 S 9823 Sus scrofa 0.01 1 0 O 9721 Cetacea 0.01 1 0 - 9761 Mysticeti 0.01 1 0 F 9765 Balaenopteridae 0.01 1 0 G 9766 Balaenoptera 0.01 1 0 S 9767 Balaenoptera acutorostrata 0.01 1 1 - 310752 Balaenoptera acutorostrata scammoni 0.01 2 0 O 9397 Chiroptera 0.01 2 0 - 30560 Microchiroptera 0.01 1 0 F 9431 Vespertilionidae 0.01 1 0 G 9434 Myotis 0.01 1 1 S 109478 Myotis brandtii 0.01 1 0 F 186994 Hipposideridae 0.01 1 0 G 58068 Hipposideros 0.01 1 1 S 186990 Hipposideros armiger 0.01 1 0 O 9971 Pholidota 0.01 1 0 F 9972 Manidae 0.01 1 0 G 9973 Manis 0.01 1 1 S 9974 Manis javanica 0.01 1 0 O 33554 Carnivora 0.01 1 0 - 379584 Caniformia 0.01 1 0 F 9608 Canidae 0.01 1 0 G 9611 Canis 0.01 1 0 S 9612 Canis lupus 0.01 1 1 - 9615 Canis lupus familiaris 0.15 25 0 - 314146 Euarchontoglires 0.09 15 0 O 9443 Primates 0.08 14 0 - 376913 Haplorrhini 0.08 14 0 - 314293 Simiiformes 0.08 13 0 - 9526 Catarrhini 0.08 13 0 - 314295 Hominoidea 0.08 13 0 F 9604 Hominidae 0.07 12 1 - 207598 Homininae 0.06 11 0 G 9605 Homo 0.06 11 11 S 9606 Homo sapiens 0.01 1 0 - 607660 Ponginae 0.01 1 0 G 9599 Pongo 0.01 1 1 S 9600 Pongo pygmaeus 0.01 1 0 - 9479 Platyrrhini 0.01 1 0 F 9498 Cebidae 0.01 1 0 - 9480 Callitrichinae 0.01 1 0 G 9481 Callithrix 0.01 1 0 - 1965096 Callithrix 0.01 1 1 S 9483 Callithrix jacchus 0.01 1 0 - 376911 Strepsirrhini 0.01 1 0 - 376915 Lemuriformes 0.01 1 0 F 30615 Cheirogaleidae 0.01 1 0 G 13149 Microcebus 0.01 1 1 S 30608 Microcebus murinus 0.05 9 0 - 314147 Glires 0.05 9 0 O 9989 Rodentia 0.05 9 0 - 1963758 Myomorpha 0.05 9 0 - 337687 Muroidea 0.05 9 0 F 10066 Muridae 0.05 9 0 - 39107 Murinae 0.05 8 0 G 10088 Mus 0.05 8 0 - 862507 Mus 0.05 8 8 S 10090 Mus musculus 0.01 1 0 G 10114 Rattus 0.01 1 1 S 10116 Rattus norvegicus 0.01 1 0 O 30656 Dermoptera 0.01 1 0 F 30657 Cynocephalidae 0.01 1 0 G 482536 Galeopterus 0.01 1 1 S 482537 Galeopterus variegatus 0.01 2 0 - 9348 Xenarthra 0.01 2 0 O 948951 Cingulata 0.01 2 0 F 9359 Dasypodidae 0.01 2 0 G 9360 Dasypus 0.01 2 2 S 9361 Dasypus novemcinctus 0.01 1 1 - 311790 Afrotheria 0.09 15 0 - 8457 Sauropsida 0.09 15 0 - 32561 Sauria 0.06 11 0 - 1329799 Archelosauria 0.06 11 0 - 8492 Archosauria 0.05 8 0 - 436486 Dinosauria 0.05 8 0 - 436489 Saurischia 0.05 8 0 - 436491 Theropoda 0.05 8 0 - 436492 Coelurosauria 0.05 8 1 C 8782 Aves 0.02 4 0 - 8783 Palaeognathae 0.02 3 0 O 8819 Apterygiformes 0.02 3 0 F 8820 Apterygidae 0.02 3 0 G 8821 Apteryx 0.02 3 0 S 8822 Apteryx australis 0.02 3 3 - 202946 Apteryx australis mantelli 0.01 1 0 O 8798 Struthioniformes 0.01 1 0 F 8799 Struthionidae 0.01 1 0 G 8800 Struthio 0.01 1 0 S 8801 Struthio camelus 0.01 1 1 - 441894 Struthio camelus australis 0.02 3 0 - 8825 Neognathae 0.01 2 0 - 1549675 Galloanserae 0.01 1 0 O 8826 Anseriformes 0.01 1 0 F 8830 Anatidae 0.01 1 0 - 2068722 Anserinae 0.01 1 0 G 8842 Anser 0.01 1 0 S 8845 Anser cygnoides 0.01 1 1 - 381198 Anser cygnoides domesticus 0.01 1 0 O 8976 Galliformes 0.01 1 0 F 8990 Numididae 0.01 1 0 G 8995 Numida 0.01 1 1 S 8996 Numida meleagris 0.01 1 0 O 9223 Psittaciformes 0.01 1 0 F 9224 Psittacidae 0.01 1 0 G 176042 Nestor 0.01 1 1 S 176057 Nestor notabilis 0.02 3 0 O 1294634 Crocodylia 0.01 2 1 - 1298654 Longirostres 0.01 1 0 F 8493 Crocodylidae 0.01 1 0 G 8500 Crocodylus 0.01 1 1 S 8502 Crocodylus porosus 0.01 1 0 F 1294636 Alligatoridae 0.01 1 0 - 34915 Alligatorinae 0.01 1 0 G 8495 Alligator 0.01 1 1 S 38654 Alligator sinensis 0.02 4 0 - 8504 Lepidosauria 0.02 4 0 O 8509 Squamata 0.02 4 0 - 1329961 Bifurcata 0.02 3 0 - 1329950 Unidentata 0.02 3 0 - 1329912 Episquamata 0.01 2 0 - 1329911 Toxicofera 0.01 2 0 - 8511 Iguania 0.01 2 0 F 2024747 Dactyloidae 0.01 2 0 G 28376 Anolis 0.01 2 2 S 28377 Anolis carolinensis 0.01 1 0 - 1329976 Laterata 0.01 1 0 - 1329975 Lacertibaenia 0.01 1 0 F 8522 Lacertidae 0.01 1 0 - 162266 Lacertinae 0.01 1 0 G 42163 Podarcis 0.01 1 1 S 65485 Podarcis tiliguerta 0.01 1 0 - 8560 Gekkota 0.01 1 0 F 8561 Gekkonidae 0.01 1 0 - 385256 Gekkoninae 0.01 1 0 G 8565 Gekko 0.01 1 1 S 146911 Gekko japonicus 0.03 5 0 C 8292 Amphibia 0.03 5 0 - 41666 Batrachia 0.03 5 0 O 8342 Anura 0.02 4 0 - 8416 Neobatrachia 0.02 3 0 - 30352 Ranoidea 0.02 3 0 F 8397 Ranidae 0.02 3 0 G 8399 Rana 0.01 2 0 - 121175 Rana 0.01 2 2 S 51331 Rana dalmatina 0.01 1 0 - 121236 Aquarana 0.01 1 1 S 8400 Rana catesbeiana 0.01 1 0 - 8426 Microhyloidea 0.01 1 0 F 8427 Microhylidae 0.01 1 0 - 166052 Microhylinae 0.01 1 1 G 113379 Kaloula 0.01 1 0 - 30319 Pipoidea 0.01 1 0 F 8352 Pipidae 0.01 1 0 - 8360 Xenopodinae 0.01 1 0 G 8353 Xenopus 0.01 1 0 - 262014 Xenopus 0.01 1 1 S 8355 Xenopus laevis 0.01 1 0 - 118072 Coelacanthimorpha 0.01 1 0 O 7894 Coelacanthiformes 0.01 1 0 F 7895 Coelacanthidae 0.01 1 0 G 7896 Latimeria 0.01 1 1 S 106881 Latimeria menadoensis 0.18 31 0 - 7898 Actinopterygii 0.18 31 0 C 186623 Actinopteri 0.18 31 0 - 41665 Neopterygii 0.18 31 0 - 32443 Teleostei 0.18 31 0 - 1489341 Osteoglossocephalai 0.18 30 0 - 186625 Clupeocephala 0.13 23 0 - 1489388 Euteleosteomorpha 0.13 22 0 - 123365 Neoteleostei 0.13 22 0 - 123366 Eurypterygia 0.13 22 0 - 123367 Ctenosquamata 0.13 22 0 - 123368 Acanthomorphata 0.13 22 0 - 123369 Euacanthomorphacea 0.13 22 1 - 1489872 Percomorphaceae 0.07 12 0 - 1489908 Ovalentaria 0.06 11 0 - 1489913 Atherinomorphae 0.05 9 0 O 76071 Beloniformes 0.05 9 0 - 28781 Adrianichthyoidei 0.05 9 0 F 47757 Adrianichthyidae 0.05 9 0 - 8088 Oryziinae 0.05 9 0 G 8089 Oryzias 0.05 9 9 S 8090 Oryzias latipes 0.01 2 1 O 28738 Cyprinodontiformes 0.01 1 0 - 8087 Cyprinodontoidei 0.01 1 0 F 8079 Poeciliidae 0.01 1 0 - 586240 Poeciliinae 0.01 1 0 G 8082 Xiphophorus 0.01 1 1 S 8083 Xiphophorus maculatus 0.01 1 0 - 1489909 Ovalentaria incertae sedis 0.01 1 0 F 30863 Pomacentridae 0.01 1 0 G 80969 Amphiprion 0.01 1 1 S 80972 Amphiprion ocellaris 0.02 4 0 - 1489922 Eupercaria 0.01 2 0 - 1489923 Eupercaria incertae sedis 0.01 2 0 F 30870 Sciaenidae 0.01 2 0 G 215357 Larimichthys 0.01 2 2 S 215358 Larimichthys crocea 0.01 2 0 O 1489928 Labriformes 0.01 2 0 F 8247 Labridae 0.01 2 0 G 30799 Labrus 0.01 2 2 S 56723 Labrus bergylta 0.01 2 0 - 1489904 Carangaria 0.01 1 0 O 8252 Pleuronectiformes 0.01 1 0 - 30942 Pleuronectoidei 0.01 1 0 F 30947 Cynoglossidae 0.01 1 0 - 603456 Cynoglossinae 0.01 1 0 G 106173 Cynoglossus 0.01 1 1 S 244447 Cynoglossus semilaevis 0.01 1 0 O 1489907 Carangiformes 0.01 1 0 F 8157 Carangidae 0.01 1 1 G 8160 Seriola 0.01 1 0 - 1489875 Gobiaria 0.01 1 0 O 1489878 Gobiiformes 0.01 1 0 - 8219 Gobioidei 0.01 1 0 F 8220 Gobiidae 0.01 1 0 - 670798 Benthophilinae 0.01 1 0 - 670802 Ponticolini 0.01 1 1 G 47309 Proterorhinus 0.01 1 0 - 1489883 Syngnathiaria 0.01 1 0 O 129912 Syngnathiformes 0.01 1 0 - 1489884 Syngnathoidei 0.01 1 0 F 72045 Syngnathidae 0.01 1 0 - 129917 Hippocampinae 0.01 1 0 G 72046 Hippocampus 0.01 1 1 S 109280 Hippocampus comes 0.01 1 0 - 1489892 Anabantaria 0.01 1 0 O 1489900 Anabantiformes 0.01 1 0 - 50370 Anabantoidei 0.01 1 0 F 270602 Osphronemidae 0.01 1 0 - 313181 Luciocephalinae 0.01 1 0 G 96902 Trichogaster 0.01 1 1 S 313441 Trichogaster fasciata 0.01 1 0 - 41705 Protacanthopterygii 0.01 1 0 O 8006 Salmoniformes 0.01 1 0 F 8015 Salmonidae 0.01 1 0 - 504568 Salmoninae 0.01 1 0 G 8016 Oncorhynchus 0.01 1 1 S 8019 Oncorhynchus kisutch 0.04 7 0 - 186634 Otomorpha 0.04 7 0 - 32519 Ostariophysi 0.04 7 0 - 186626 Otophysi 0.03 5 0 - 186627 Cypriniphysae 0.03 5 0 O 7952 Cypriniformes 0.03 5 0 - 30727 Cyprinoidea 0.03 5 0 F 7953 Cyprinidae 0.02 4 0 G 7961 Cyprinus 0.02 4 4 S 7962 Cyprinus carpio 0.01 1 0 G 7954 Danio 0.01 1 1 S 7955 Danio rerio 0.01 2 0 - 186628 Characiphysae 0.01 2 0 O 7991 Characiformes 0.01 2 0 - 1489739 Characoidei 0.01 1 0 F 7992 Characidae 0.01 1 0 - 533331 Characidae incertae sedis 0.01 1 0 - 883878 Astyanax clade 0.01 1 0 G 7993 Astyanax 0.01 1 1 S 7994 Astyanax mexicanus 0.01 1 0 F 42495 Serrasalmidae 0.01 1 0 G 42513 Pygocentrus 0.01 1 1 S 42514 Pygocentrus nattereri 0.01 1 0 - 1489343 Osteoglossocephala 0.01 1 0 - 31089 Osteoglossomorpha 0.01 1 0 O 41712 Osteoglossiformes 0.01 1 0 F 27723 Osteoglossidae 0.01 1 0 G 27726 Scleropages 0.01 1 1 S 113540 Scleropages formosus 0.01 1 0 C 7777 Chondrichthyes 0.01 1 0 - 7863 Holocephali 0.01 1 0 O 7864 Chimaeriformes 0.01 1 0 F 7865 Callorhinchidae 0.01 1 0 G 7866 Callorhinchus 0.01 1 1 S 7868 Callorhinchus milii 0.01 1 0 P 7586 Echinodermata 0.01 1 0 - 133551 Eleutherozoa 0.01 1 0 - 7624 Echinozoa 0.01 1 0 C 7625 Echinoidea 0.01 1 0 - 7638 Euechinoidea 0.01 1 0 - 7674 Echinacea 0.01 1 0 O 7675 Echinoida 0.01 1 0 F 31181 Strongylocentrotidae 0.01 1 0 G 7664 Strongylocentrotus 0.01 1 1 S 7668 Strongylocentrotus purpuratus 0.25 42 0 - 33317 Protostomia 0.22 38 0 - 1206794 Ecdysozoa 0.15 26 0 - 88770 Panarthropoda 0.15 26 0 P 6656 Arthropoda 0.14 24 0 - 197563 Mandibulata 0.14 24 0 - 197562 Pancrustacea 0.13 23 0 - 6960 Hexapoda 0.13 23 0 C 50557 Insecta 0.13 23 0 - 85512 Dicondylia 0.13 23 0 - 7496 Pterygota 0.13 23 0 - 33340 Neoptera 0.10 17 0 - 33392 Holometabola 0.05 9 0 O 7399 Hymenoptera 0.05 8 0 - 7400 Apocrita 0.04 6 0 - 7434 Aculeata 0.02 4 0 - 34725 Vespoidea 0.02 4 0 F 36668 Formicidae 0.02 4 1 - 34695 Myrmicinae 0.01 2 0 - 144017 Solenopsidini 0.01 2 0 G 55077 Monomorium 0.01 2 2 S 307658 Monomorium pharaonis 0.01 1 0 - 143999 Attini 0.01 1 1 G 34717 Trachymyrmex 0.01 2 0 - 34735 Apoidea 0.01 2 0 F 7458 Apidae 0.01 1 0 - 70988 Bombinae 0.01 1 0 - 83311 Bombini 0.01 1 0 G 28641 Bombus 0.01 1 0 - 144703 Pyrobombus 0.01 1 1 S 132113 Bombus impatiens 0.01 1 0 - 78170 Xylocopinae 0.01 1 0 - 78171 Ceratinini 0.01 1 0 G 78173 Ceratina 0.01 1 0 - 236025 Zadontomerus 0.01 1 1 S 156304 Ceratina calcarata 0.01 2 0 - 1955251 Terebrantes 0.01 1 0 - 7401 Ichneumonoidea 0.01 1 0 F 7402 Braconidae 0.01 1 0 - 68882 Aphidiinae 0.01 1 0 G 37852 Aphidius 0.01 1 1 S 37627 Aphidius ervi 0.01 1 0 - 272201 Chaldicoidea group 0.01 1 0 - 7422 Chalcidoidea 0.01 1 0 F 7489 Trichogrammatidae 0.01 1 0 G 7490 Trichogramma 0.01 1 1 S 7493 Trichogramma pretiosum 0.01 1 0 - 85772 Tenthredinoidea 0.01 1 0 F 52632 Diprionidae 0.01 1 0 - 410274 Diprioninae 0.01 1 0 G 270857 Neodiprion 0.01 1 1 S 441921 Neodiprion lecontei 0.04 7 0 O 7147 Diptera 0.04 7 0 - 7203 Brachycera 0.04 7 0 - 43733 Muscomorpha 0.04 7 0 - 480118 Eremoneura 0.04 7 0 - 480117 Cyclorrhapha 0.04 7 0 - 43738 Schizophora 0.04 7 1 - 43741 Acalyptratae 0.03 5 0 - 43746 Ephydroidea 0.03 5 0 F 7214 Drosophilidae 0.03 5 0 - 43845 Drosophilinae 0.03 5 0 - 46877 Drosophilini 0.03 5 0 G 7215 Drosophila 0.02 4 0 - 32341 Sophophora 0.02 4 0 S 32346 melanogaster group 0.02 3 0 S 32351 melanogaster subgroup 0.01 2 2 S 7227 Drosophila melanogaster 0.01 1 1 S 7220 Drosophila erecta 0.01 1 0 S 32353 suzukii subgroup 0.01 1 1 S 28584 Drosophila suzukii 0.01 1 0 - 32280 Dorsilopha 0.01 1 1 S 30019 Drosophila busckii 0.01 1 0 - 43752 Tephritoidea 0.01 1 0 F 7211 Tephritidae 0.01 1 0 - 164860 Dacinae 0.01 1 0 - 164862 Ceratitidini 0.01 1 0 G 7212 Ceratitis 0.01 1 0 - 474492 Ceratitis 0.01 1 1 S 7213 Ceratitis capitata 0.01 1 0 O 7041 Coleoptera 0.01 1 0 - 41084 Polyphaga 0.01 1 0 - 41086 Scarabaeiformia 0.01 1 0 - 75546 Scarabaeoidea 0.01 1 0 F 7055 Scarabaeidae 0.01 1 0 - 41142 Scarabaeinae 0.01 1 0 - 569643 Scarabaeinae incertae sedis 0.01 1 0 G 166331 Onthophagus 0.01 1 1 S 166361 Onthophagus taurus 0.02 4 0 - 33342 Paraneoptera 0.02 3 0 O 7524 Hemiptera 0.01 1 0 - 33343 Prosorrhyncha 0.01 1 0 - 33345 Heteroptera 0.01 1 0 - 33347 Euheteroptera 0.01 1 0 - 33349 Neoheteroptera 0.01 1 0 - 33351 Panheteroptera 0.01 1 0 - 33357 Pentatomomorpha 0.01 1 0 - 33358 Pentatomoidea 0.01 1 0 F 160513 Pentatomidae 0.01 1 0 - 286710 Pentatominae 0.01 1 0 G 286705 Halyomorpha 0.01 1 1 S 286706 Halyomorpha halys 0.01 1 0 - 33373 Sternorrhyncha 0.01 1 0 - 33380 Aphidomorpha 0.01 1 0 - 33385 Aphidoidea 0.01 1 0 F 27482 Aphididae 0.01 1 0 - 133076 Aphidinae 0.01 1 0 - 33386 Macrosiphini 0.01 1 0 G 143947 Diuraphis 0.01 1 1 S 143948 Diuraphis noxia 0.01 1 0 - 1955247 Auchenorrhyncha 0.01 1 0 - 33361 Fulgoromorpha 0.01 1 0 - 36151 Fulgoroidea 0.01 1 0 F 33362 Delphacidae 0.01 1 0 - 130551 Delphacinae 0.01 1 0 G 108930 Nilaparvata 0.01 1 1 S 108931 Nilaparvata lugens 0.01 1 0 - 1930602 Psocodea 0.01 1 0 O 85819 Phthiraptera 0.01 1 0 - 30005 Anoplura 0.01 1 0 F 121221 Pediculidae 0.01 1 0 G 121222 Pediculus 0.01 1 0 S 121225 Pediculus humanus 0.01 1 1 - 121224 Pediculus humanus corporis 0.01 2 0 - 33341 Polyneoptera 0.01 1 0 - 6970 Dictyoptera 0.01 1 0 O 85823 Blattodea 0.01 1 0 - 1049657 Blattoidea 0.01 1 0 - 1912919 Termitoidae 0.01 1 0 F 7501 Termopsidae 0.01 1 0 - 127820 Termopsinae 0.01 1 0 - 127821 Termopsini 0.01 1 0 G 7502 Zootermopsis 0.01 1 1 S 136037 Zootermopsis nevadensis 0.01 1 0 O 6993 Orthoptera 0.01 1 0 - 7001 Caelifera 0.01 1 0 - 1955150 Acrididea 0.01 1 0 - 70910 Acridomorpha 0.01 1 0 - 92621 Acridoidea 0.01 1 0 F 7002 Acrididae 0.01 1 0 - 27549 Oedipodinae 0.01 1 0 G 7003 Locusta 0.01 1 1 S 7004 Locusta migratoria 0.01 1 0 - 6657 Crustacea 0.01 1 0 C 72037 Maxillopoda 0.01 1 0 - 6830 Copepoda 0.01 1 0 - 116569 Neocopepoda 0.01 1 0 - 116570 Gymnoplea 0.01 1 0 O 6833 Calanoida 0.01 1 0 F 88013 Temoridae 0.01 1 0 G 88014 Eurytemora 0.01 1 1 S 88015 Eurytemora affinis 0.01 2 0 - 6843 Chelicerata 0.01 1 0 C 6844 Merostomata 0.01 1 0 O 6845 Xiphosura 0.01 1 0 F 6846 Limulidae 0.01 1 0 G 6849 Limulus 0.01 1 1 S 6850 Limulus polyphemus 0.01 1 0 C 6854 Arachnida 0.01 1 0 - 6933 Acari 0.01 1 0 - 6946 Acariformes 0.01 1 0 O 83136 Trombidiformes 0.01 1 0 - 6947 Prostigmata 0.01 1 0 - 83145 Eleutherengona 0.01 1 0 - 188550 Raphignathae 0.01 1 0 - 83146 Tetranychoidea 0.01 1 0 F 32262 Tetranychidae 0.01 1 0 G 32263 Tetranychus 0.01 1 1 S 32264 Tetranychus urticae 0.07 12 0 P 6231 Nematoda 0.07 12 0 C 119089 Chromadorea 0.05 8 0 O 6236 Rhabditida 0.04 6 0 - 6308 Strongylida 0.02 3 0 - 27829 Strongyloidea 0.02 3 0 F 27830 Strongylidae 0.01 2 0 - 1115675 Strongylinae 0.01 2 0 G 40345 Strongylus 0.01 2 2 S 40348 Strongylus vulgaris 0.01 1 0 - 132364 Cyathostominae 0.01 1 0 G 71460 Cylicostephanus 0.01 1 1 S 71465 Cylicostephanus goldi 0.01 1 0 - 6310 Metastrongyloidea 0.01 1 0 F 33275 Angiostrongylidae 0.01 1 0 G 6312 Angiostrongylus 0.01 1 1 S 334426 Angiostrongylus costaricensis 0.01 1 0 - 6314 Trichostrongyloidea 0.01 1 0 F 27833 Heligmonellidae 0.01 1 0 - 53472 Nippostrongylinae 0.01 1 0 G 27834 Nippostrongylus 0.01 1 1 S 27835 Nippostrongylus brasiliensis 0.01 1 0 - 33277 Ancylostomatoidea 0.01 1 0 F 33278 Ancylostomatidae 0.01 1 0 - 53477 Bunostominae 0.01 1 0 G 51030 Necator 0.01 1 1 S 51031 Necator americanus 0.01 2 0 - 55879 Rhabditoidea 0.01 2 0 F 6243 Rhabditidae 0.01 2 0 - 55885 Peloderinae 0.01 2 0 G 6237 Caenorhabditis 0.01 2 2 S 31234 Caenorhabditis remanei 0.01 2 0 O 6249 Ascaridida 0.01 2 0 - 33256 Ascaridoidea 0.01 2 0 F 6250 Ascarididae 0.01 2 0 G 6251 Ascaris 0.01 2 2 S 6252 Ascaris lumbricoides 0.01 1 0 O 6274 Spirurida 0.01 1 0 - 2072716 Spiruromorpha 0.01 1 0 - 6295 Filarioidea 0.01 1 0 F 6296 Onchocercidae 0.01 1 0 G 6278 Brugia 0.01 1 1 S 42155 Brugia timori 0.01 1 0 O 70426 Oxyurida 0.01 1 0 - 51025 Oxyuroidea 0.01 1 0 F 51026 Oxyuridae 0.01 1 0 G 51027 Enterobius 0.01 1 1 S 51028 Enterobius vermicularis 0.02 4 0 - 1206795 Lophotrochozoa 0.02 4 0 P 6447 Mollusca 0.01 2 0 C 6448 Gastropoda 0.01 2 0 - 216305 Heterobranchia 0.01 2 0 - 216307 Euthyneura 0.01 1 0 - 6496 Euopisthobranchia 0.01 1 0 - 6497 Aplysiomorpha 0.01 1 0 - 216318 Aplysioidea 0.01 1 0 F 6498 Aplysiidae 0.01 1 0 G 6499 Aplysia 0.01 1 1 S 6500 Aplysia californica 0.01 1 0 - 977775 Panpulmonata 0.01 1 0 - 977779 Hygrophila 0.01 1 0 - 977780 Planorboidea 0.01 1 0 F 6524 Planorbidae 0.01 1 0 G 6525 Biomphalaria 0.01 1 1 S 6526 Biomphalaria glabrata 0.01 2 0 C 6605 Cephalopoda 0.01 2 0 - 6606 Coleoidea 0.01 2 0 - 215449 Neocoleoidea 0.01 1 0 - 215450 Decapodiformes 0.01 1 0 O 551287 Sepiida 0.01 1 0 - 551351 Sepiina 0.01 1 0 F 6608 Sepiidae 0.01 1 0 G 6609 Sepia 0.01 1 1 S 31210 Sepia esculenta 0.01 1 0 - 215451 Octopodiformes 0.01 1 0 O 6638 Octopoda 0.01 1 0 - 6646 Incirrata 0.01 1 0 F 6647 Octopodidae 0.01 1 0 G 6643 Octopus 0.01 1 1 S 37653 Octopus bimaculoides 0.16 28 0 P 6157 Platyhelminthes 0.09 15 0 C 6199 Cestoda 0.09 15 0 - 6200 Eucestoda 0.06 11 0 O 1224679 Diphyllobothriidea 0.06 11 0 F 28843 Diphyllobothriidae 0.03 5 0 G 46580 Spirometra 0.03 5 5 S 99802 Spirometra erinaceieuropaei 0.02 4 0 G 70666 Schistocephalus 0.02 4 4 S 70667 Schistocephalus solidus 0.01 2 0 G 28844 Diphyllobothrium 0.01 2 2 S 60516 Diphyllobothrium latum 0.02 4 0 O 6201 Cyclophyllidea 0.02 4 0 F 6208 Taeniidae 0.01 2 0 G 6202 Taenia 0.01 2 2 S 60517 Taenia asiatica 0.01 2 0 G 1434708 Hydatigera 0.01 2 2 S 6205 Hydatigera taeniaeformis 0.05 9 0 C 6178 Trematoda 0.05 9 0 - 6179 Digenea 0.04 7 0 O 6180 Strigeidida 0.04 7 0 - 31244 Schistosomatoidea 0.04 7 0 F 31245 Schistosomatidae 0.02 4 0 G 100601 Trichobilharzia 0.02 4 4 S 157069 Trichobilharzia regenti 0.02 3 0 G 6181 Schistosoma 0.01 1 1 S 6186 Schistosoma curassoni 0.01 1 1 S 6188 Schistosoma rodhaini 0.01 1 1 S 31246 Schistosoma mattheei 0.01 2 0 O 27871 Plagiorchiida 0.01 1 0 - 27841 Echinostomata 0.01 1 0 - 404429 Echinostomatoidea 0.01 1 0 F 99737 Echinostomatidae 0.01 1 0 G 27847 Echinostoma 0.01 1 1 S 27848 Echinostoma caproni 0.01 1 0 - 27872 Xiphidiata 0.01 1 0 - 1776223 Gorgoderoidea 0.01 1 0 F 73421 Dicrocoeliidae 0.01 1 0 G 57077 Dicrocoelium 0.01 1 1 S 57078 Dicrocoelium dendriticum 0.02 4 0 C 37945 Monogenea 0.02 4 0 O 40163 Polyopisthocotylea 0.02 4 0 F 54588 Polystomatidae 0.02 4 0 G 117902 Protopolystoma 0.02 4 4 S 117903 Protopolystoma xenopodis 0.01 2 0 P 6073 Cnidaria 0.01 1 0 C 6074 Hydrozoa 0.01 1 0 - 37516 Hydroidolina 0.01 1 0 O 406427 Anthoathecata 0.01 1 0 - 1612408 Aplanulata 0.01 1 0 F 6080 Hydridae 0.01 1 0 G 6083 Hydra 0.01 1 1 S 6087 Hydra vulgaris 0.01 1 0 C 6101 Anthozoa 0.01 1 0 - 6102 Hexacorallia 0.01 1 0 O 6103 Actiniaria 0.01 1 0 F 45349 Edwardsiidae 0.01 1 0 G 45350 Nematostella 0.01 1 1 S 45351 Nematostella vectensis 0.01 1 0 P 6040 Porifera 0.01 1 0 C 6042 Demospongiae 0.01 1 0 - 1779146 Heteroscleromorpha 0.01 1 0 O 6049 Haplosclerida 0.01 1 0 F 178475 Niphatidae 0.01 1 0 G 178513 Amphimedon 0.01 1 1 S 400682 Amphimedon queenslandica 0.16 28 0 K 4751 Fungi 0.16 27 0 - 451864 Dikarya 0.12 21 0 P 4890 Ascomycota 0.12 21 1 - 716545 saccharomyceta 0.08 13 0 - 147538 Pezizomycotina 0.08 13 0 - 716546 leotiomyceta 0.04 7 0 - 715989 sordariomyceta 0.04 7 0 C 147550 Sordariomycetes 0.04 6 0 - 222543 Hypocreomycetidae 0.02 3 0 O 5125 Hypocreales 0.01 2 0 F 110618 Nectriaceae 0.01 2 0 G 5506 Fusarium 0.01 1 0 - 171627 Fusarium fujikuroi species complex 0.01 1 0 S 117187 Fusarium verticillioides 0.01 1 1 - 334819 Fusarium verticillioides 7600 0.01 1 0 - 171631 Fusarium oxysporum species complex 0.01 1 0 S 5507 Fusarium oxysporum 0.01 1 0 - 59765 Fusarium oxysporum f. sp. lycopersici 0.01 1 1 - 426428 Fusarium oxysporum f. sp. lycopersici 4287 0.01 1 0 F 34397 Clavicipitaceae 0.01 1 0 G 5112 Epichloe 0.01 1 1 S 35717 Epichloe festucae 0.02 3 0 O 1028384 Glomerellales 0.02 3 0 F 681950 Glomerellaceae 0.02 3 0 G 5455 Colletotrichum 0.01 2 0 S 474922 Colletotrichum gloeosporioides 0.01 2 2 - 1213859 Colletotrichum gloeosporioides Nara gc5 0.01 1 0 S 710243 Colletotrichum fioriniae 0.01 1 1 - 1445577 Colletotrichum fioriniae PJ7 0.01 1 0 - 222544 Sordariomycetidae 0.01 1 0 O 5139 Sordariales 0.01 1 0 F 5148 Sordariaceae 0.01 1 0 G 5140 Neurospora 0.01 1 0 S 40127 Neurospora tetrasperma 0.01 1 1 - 510951 Neurospora tetrasperma FGSC 2508 0.02 3 0 C 147545 Eurotiomycetes 0.02 3 0 - 451871 Eurotiomycetidae 0.01 2 0 O 33183 Onygenales 0.01 1 0 F 33184 Onygenaceae 0.01 1 0 G 33187 Uncinocarpus 0.01 1 0 S 33188 Uncinocarpus reesii 0.01 1 1 - 336963 Uncinocarpus reesii 1704 0.01 1 0 F 34384 Arthrodermataceae 0.01 1 0 G 5550 Trichophyton 0.01 1 0 S 5551 Trichophyton rubrum 0.01 1 1 - 559305 Trichophyton rubrum CBS 118892 0.01 1 0 O 5042 Eurotiales 0.01 1 0 F 1131492 Aspergillaceae 0.01 1 0 G 5052 Aspergillus 0.01 1 1 S 109264 Aspergillus bombycis 0.02 3 0 - 715962 dothideomyceta 0.02 3 0 C 147541 Dothideomycetes 0.01 2 0 - 451868 Pleosporomycetidae 0.01 2 0 O 92860 Pleosporales 0.01 2 0 - 715340 Pleosporineae 0.01 2 0 F 28556 Pleosporaceae 0.01 1 0 G 5027 Pyrenophora 0.01 1 0 S 53485 Pyrenophora teres 0.01 1 0 - 97479 Pyrenophora teres f. teres 0.01 1 1 - 861557 Pyrenophora teres f. teres 0-1 0.01 1 0 G 39952 Setosphaeria 0.01 1 0 S 93612 Setosphaeria turcica 0.01 1 1 - 671987 Setosphaeria turcica Et28A 0.01 1 0 - 159987 Dothideomycetes incertae sedis 0.01 1 0 O 451869 Botryosphaeriales 0.01 1 0 F 45131 Botryosphaeriaceae 0.01 1 0 G 66735 Diplodia 0.01 1 1 S 236234 Diplodia corticola 0.04 7 0 - 147537 Saccharomycotina 0.04 7 0 C 4891 Saccharomycetes 0.04 7 0 O 4892 Saccharomycetales 0.02 4 0 F 4893 Saccharomycetaceae 0.01 2 0 G 4930 Saccharomyces 0.01 1 1 S 4932 Saccharomyces cerevisiae 0.01 1 1 S 27291 Saccharomyces paradoxus 0.01 1 0 G 4953 Zygosaccharomyces 0.01 1 1 S 4956 Zygosaccharomyces rouxii 0.01 1 0 G 374468 Nakaseomyces 0.01 1 0 - 600669 Nakaseomyces/Candida clade 0.01 1 1 S 5478 [Candida] glabrata 0.01 2 0 F 766764 Debaryomycetaceae 0.01 1 0 G 412764 Spathaspora 0.01 1 0 S 340170 Spathaspora passalidarum 0.01 1 1 - 619300 Spathaspora passalidarum NRRL Y-27907 0.01 1 0 - 1535325 Candida/Lodderomyces clade 0.01 1 0 G 1535326 Candida 0.01 1 1 S 5480 Candida parapsilosis 0.01 1 0 F 115784 Phaffomycetaceae 0.01 1 0 G 599737 Wickerhamomyces 0.01 1 0 S 4927 Wickerhamomyces anomalus 0.01 1 1 - 683960 Wickerhamomyces anomalus NRRL Y-366-8 0.04 6 0 P 5204 Basidiomycota 0.01 2 0 - 5302 Agaricomycotina 0.01 1 0 C 155616 Tremellomycetes 0.01 1 0 O 5234 Tremellales 0.01 1 0 F 1884633 Cryptococcaceae 0.01 1 0 G 5206 Cryptococcus 0.01 1 0 S 104669 Cryptococcus amylolentus 0.01 1 1 - 1295533 Cryptococcus amylolentus CBS 6039 0.01 1 0 C 155619 Agaricomycetes 0.01 1 0 - 355688 Agaricomycetes incertae sedis 0.01 1 0 O 5303 Polyporales 0.01 1 0 F 396331 Phanerochaetaceae 0.01 1 0 G 5305 Phanerochaete 0.01 1 0 S 231932 Phanerochaete carnosa 0.01 1 1 - 650164 Phanerochaete carnosa HHB-10118-sp 0.01 2 0 - 29000 Pucciniomycotina 0.01 1 0 C 162481 Microbotryomycetes 0.01 1 0 O 231213 Sporidiobolales 0.01 1 0 F 1799696 Sporidiobolaceae 0.01 1 0 G 5533 Rhodotorula 0.01 1 1 S 5286 Rhodotorula toruloides 0.01 1 0 C 162484 Pucciniomycetes 0.01 1 0 O 5258 Pucciniales 0.01 1 0 F 5259 Melampsoraceae 0.01 1 0 G 5260 Melampsora 0.01 1 0 S 203908 Melampsora larici-populina 0.01 1 1 - 747676 Melampsora larici-populina 98AG31 0.01 2 0 - 452284 Ustilaginomycotina 0.01 2 0 C 5257 Ustilaginomycetes 0.01 2 0 O 5267 Ustilaginales 0.01 2 0 F 5268 Ustilaginaceae 0.01 2 0 G 63265 Sporisorium 0.01 2 2 S 49012 Sporisorium scitamineum 0.01 1 0 P 1913637 Mucoromycota 0.01 1 0 - 214504 Glomeromycotina 0.01 1 0 C 214506 Glomeromycetes 0.01 1 0 O 36750 Glomerales 0.01 1 1 F 36751 Glomeraceae 0.01 1 0 O 28009 Choanoflagellida 0.01 1 0 - 1924738 Craspedida 0.01 1 0 F 81529 Salpingoecidae 0.01 1 0 G 81525 Monosiga 0.01 1 0 S 81824 Monosiga brevicollis 0.01 1 1 - 431895 Monosiga brevicollis MX1 0.01 1 0 - 42461 Opisthokonta incertae sedis 0.01 1 0 C 127916 Ichthyosporea 0.01 1 0 G 192874 Capsaspora 0.01 1 0 S 192875 Capsaspora owczarzaki 0.01 1 1 - 595528 Capsaspora owczarzaki ATCC 30864 0.03 5 0 - 33630 Alveolata 0.03 5 0 P 5794 Apicomplexa 0.02 4 0 C 422676 Aconoidasida 0.02 3 0 O 5819 Haemosporida 0.02 3 0 F 1639119 Plasmodiidae 0.02 3 0 G 5820 Plasmodium 0.01 2 0 - 418104 Plasmodium (Haemamoeba) 0.01 2 2 S 85471 Plasmodium relictum 0.01 1 0 - 418103 Plasmodium (Plasmodium) 0.01 1 1 S 36330 Plasmodium ovale 0.01 1 0 - 5863 Piroplasmida 0.01 1 0 F 32594 Babesiidae 0.01 1 0 G 5864 Babesia 0.01 1 1 S 5866 Babesia bigemina 0.01 1 0 C 1280412 Conoidasida 0.01 1 0 - 5796 Coccidia 0.01 1 0 O 75739 Eucoccidiorida 0.01 1 0 - 423054 Eimeriorina 0.01 1 0 F 35082 Cryptosporidiidae 0.01 1 0 G 5806 Cryptosporidium 0.01 1 0 S 5808 Cryptosporidium muris 0.01 1 1 - 441375 Cryptosporidium muris RN66 0.02 4 0 - 33634 Stramenopiles 0.02 4 0 C 4762 Oomycetes 0.02 4 0 O 4776 Peronosporales 0.02 4 0 G 4783 Phytophthora 0.01 2 2 S 4784 Phytophthora capsici 0.01 1 0 S 4792 Phytophthora parasitica 0.01 1 1 - 761204 Phytophthora parasitica INRA-310 0.01 1 1 S 67593 Phytophthora sojae 0.01 1 0 - 2763 Rhodophyta 0.01 1 0 C 2797 Bangiophyceae 0.01 1 0 O 265318 Cyanidiales 0.01 1 0 F 265316 Cyanidiaceae 0.01 1 0 G 83373 Galdieria 0.01 1 1 S 130081 Galdieria sulphuraria 0.01 1 0 - 5719 Parabasalia 0.01 1 0 O 37104 Trichomonadida 0.01 1 0 F 181550 Trichomonadidae 0.01 1 0 G 5721 Trichomonas 0.01 1 0 S 5722 Trichomonas vaginalis 0.01 1 1 - 412133 Trichomonas vaginalis G3 0.01 1 0 - 61964 environmental samples 0.01 1 1 S 100272 uncultured eukaryote 0.27 46 0 D 2 Bacteria 0.10 17 0 - 1783272 Terrabacteria group 0.08 13 0 P 1239 Firmicutes 0.06 11 0 C 91061 Bacilli 0.06 10 0 O 1385 Bacillales 0.05 8 0 F 186817 Bacillaceae 0.05 8 0 G 1386 Bacillus 0.02 4 1 S 86661 Bacillus cereus group 0.01 1 0 S 1396 Bacillus cereus 0.01 1 1 - 288681 Bacillus cereus E33L 0.01 1 1 S 1405 Bacillus mycoides 0.01 1 0 S 1428 Bacillus thuringiensis 0.01 1 1 - 1195464 Bacillus thuringiensis MC28 0.01 1 1 S 1408 Bacillus pumilus 0.01 1 0 S 1478 Bacillus simplex 0.01 1 1 - 1349754 Bacillus simplex NBRC 15720 = DSM 1321 0.01 1 1 S 79880 Bacillus clausii 0.01 1 0 S 653685 Bacillus subtilis group 0.01 1 1 S 1648923 Bacillus paralicheniformis 0.01 1 0 F 186818 Planococcaceae 0.01 1 0 G 648800 Solibacillus 0.01 1 1 S 76853 Solibacillus silvestris 0.01 1 0 F 186822 Paenibacillaceae 0.01 1 0 G 44249 Paenibacillus 0.01 1 1 S 169760 Paenibacillus stellifer 0.01 1 0 O 186826 Lactobacillales 0.01 1 0 F 81852 Enterococcaceae 0.01 1 0 G 51668 Tetragenococcus 0.01 1 0 S 51669 Tetragenococcus halophilus 0.01 1 1 - 945021 Tetragenococcus halophilus NBRC 12172 0.01 2 0 C 186801 Clostridia 0.01 2 0 O 186802 Clostridiales 0.01 1 0 F 31979 Clostridiaceae 0.01 1 0 G 1485 Clostridium 0.01 1 0 S 1513 Clostridium tetani 0.01 1 1 - 212717 Clostridium tetani E88 0.01 1 0 F 186806 Eubacteriaceae 0.01 1 0 G 1730 Eubacterium 0.01 1 0 S 1736 Eubacterium limosum 0.01 1 1 - 903814 Eubacterium limosum KIST612 0.01 2 0 - 1798711 Cyanobacteria/Melainabacteria group 0.01 2 0 P 1117 Cyanobacteria 0.01 1 0 O 1161 Nostocales 0.01 1 0 F 1162 Nostocaceae 0.01 1 0 G 1163 Anabaena 0.01 1 0 S 1165 Anabaena cylindrica 0.01 1 1 - 272123 Anabaena cylindrica PCC 7122 0.01 1 0 - 1301283 Oscillatoriophycideae 0.01 1 0 O 1118 Chroococcales 0.01 1 0 F 1890464 Chroococcaceae 0.01 1 0 G 102231 Gloeocapsa 0.01 1 1 S 1173026 Gloeocapsa sp. PCC 7428 0.01 1 0 P 201174 Actinobacteria 0.01 1 0 C 1760 Actinobacteria 0.01 1 0 O 85011 Streptomycetales 0.01 1 0 F 2062 Streptomycetaceae 0.01 1 0 G 1883 Streptomyces 0.01 1 1 S 1938841 Streptomyces sp. 2323.1 0.01 1 0 P 544448 Tenericutes 0.01 1 0 C 31969 Mollicutes 0.01 1 0 O 186328 Entomoplasmatales 0.01 1 0 F 2131 Spiroplasmataceae 0.01 1 0 G 2132 Spiroplasma 0.01 1 0 S 216945 Spiroplasma syrphidicola 0.01 1 1 - 1276229 Spiroplasma syrphidicola EA-1 0.09 16 0 P 1224 Proteobacteria 0.05 9 0 C 1236 Gammaproteobacteria 0.03 5 0 O 91347 Enterobacterales 0.01 2 0 F 543 Enterobacteriaceae 0.01 1 0 G 579 Kluyvera 0.01 1 1 S 61648 Kluyvera intermedia 0.01 1 0 G 590 Salmonella 0.01 1 0 S 28901 Salmonella enterica 0.01 1 1 - 59201 Salmonella enterica subsp. enterica 0.01 2 0 F 1903414 Morganellaceae 0.01 1 0 G 583 Proteus 0.01 1 1 S 585 Proteus vulgaris 0.01 1 0 G 637 Arsenophonus 0.01 1 1 S 638 Arsenophonus nasoniae 0.01 1 0 F 1903412 Hafniaceae 0.01 1 0 G 635 Edwardsiella 0.01 1 1 S 1263550 Edwardsiella piscicida 0.01 2 0 O 72274 Pseudomonadales 0.01 1 0 F 468 Moraxellaceae 0.01 1 0 G 469 Acinetobacter 0.01 1 0 S 909768 Acinetobacter calcoaceticus/baumannii complex 0.01 1 1 S 48296 Acinetobacter pittii 0.01 1 0 F 135621 Pseudomonadaceae 0.01 1 0 G 286 Pseudomonas 0.01 1 1 S 1930532 Pseudomonas sp. CC6-YY-74 0.01 1 0 O 135619 Oceanospirillales 0.01 1 0 F 28256 Halomonadaceae 0.01 1 0 G 504090 Kushneria 0.01 1 1 S 157779 Kushneria marisflavi 0.01 1 0 O 135623 Vibrionales 0.01 1 0 F 641 Vibrionaceae 0.01 1 0 G 657 Photobacterium 0.01 1 0 S 1295392 Photobacterium gaetbulicola 0.01 1 1 - 658445 Photobacterium gaetbulicola Gung47 0.02 4 0 C 28211 Alphaproteobacteria 0.01 1 0 O 356 Rhizobiales 0.01 1 0 F 69277 Phyllobacteriaceae 0.01 1 0 G 68287 Mesorhizobium 0.01 1 1 S 381 Mesorhizobium loti 0.01 1 0 O 766 Rickettsiales 0.01 1 0 F 775 Rickettsiaceae 0.01 1 0 - 33988 Rickettsieae 0.01 1 0 G 780 Rickettsia 0.01 1 1 S 114277 spotted fever group 0.01 1 0 - 82117 unclassified Alphaproteobacteria 0.01 1 0 G 213485 Micavibrio 0.01 1 1 S 349221 Micavibrio aeruginosavorus 0.01 1 0 O 204441 Rhodospirillales 0.01 1 0 F 433 Acetobacteraceae 0.01 1 0 G 434 Acetobacter 0.01 1 1 S 104102 Acetobacter tropicalis 0.02 3 0 - 68525 delta/epsilon subdivisions 0.01 2 0 C 28221 Deltaproteobacteria 0.01 1 0 O 29 Myxococcales 0.01 1 0 - 80812 Sorangiineae 0.01 1 0 - 215910 unclassified Sorangiineae 0.01 1 0 G 1649470 Minicystis 0.01 1 1 S 888845 Minicystis rosea 0.01 1 0 O 213115 Desulfovibrionales 0.01 1 0 F 194924 Desulfovibrionaceae 0.01 1 0 G 872 Desulfovibrio 0.01 1 0 S 184917 Desulfovibrio magneticus 0.01 1 1 - 573370 Desulfovibrio magneticus RS-1 0.01 1 0 C 29547 Epsilonproteobacteria 0.01 1 0 O 213849 Campylobacterales 0.01 1 0 F 72294 Campylobacteraceae 0.01 1 0 G 57665 Sulfurospirillum 0.01 1 0 S 194424 Sulfurospirillum halorespirans 0.01 1 1 - 1193502 Sulfurospirillum halorespirans DSM 13726 0.05 8 0 - 1783270 FCB group 0.05 8 0 - 68336 Bacteroidetes/Chlorobi group 0.04 6 0 P 976 Bacteroidetes 0.02 4 0 C 117743 Flavobacteriia 0.02 4 0 O 200644 Flavobacteriales 0.02 3 0 F 49546 Flavobacteriaceae 0.01 1 1 G 76831 Myroides 0.01 1 0 G 143222 Salegentibacter 0.01 1 1 S 143223 Salegentibacter salegens 0.01 1 0 G 326319 Dokdonia 0.01 1 1 S 983548 Dokdonia sp. 4H-3-7-5 0.01 1 0 - 313602 unclassified Flavobacteriales 0.01 1 0 G 336809 Candidatus Sulcia 0.01 1 1 S 336810 Candidatus Sulcia muelleri 0.01 1 0 C 117747 Sphingobacteriia 0.01 1 0 O 200666 Sphingobacteriales 0.01 1 0 F 84566 Sphingobacteriaceae 0.01 1 0 G 423349 Mucilaginibacter 0.01 1 1 S 652787 Mucilaginibacter mallensis 0.01 1 0 C 200643 Bacteroidia 0.01 1 0 O 171549 Bacteroidales 0.01 1 0 F 171552 Prevotellaceae 0.01 1 1 G 838 Prevotella 0.01 1 0 P 1090 Chlorobi 0.01 1 0 C 191410 Chlorobia 0.01 1 0 O 191411 Chlorobiales 0.01 1 0 F 191412 Chlorobiaceae 0.01 1 0 G 100715 Chloroherpeton 0.01 1 0 S 100716 Chloroherpeton thalassium 0.01 1 1 - 517418 Chloroherpeton thalassium ATCC 35110 0.01 1 0 P 1134404 Ignavibacteriae 0.01 1 0 C 795747 Ignavibacteria 0.01 1 0 O 795748 Ignavibacteriales 0.01 1 0 F 795749 Ignavibacteriaceae 0.01 1 0 G 795750 Ignavibacterium 0.01 1 0 S 591197 Ignavibacterium album 0.01 1 1 - 945713 Ignavibacterium album JCM 16511 0.02 3 0 - 48479 environmental samples 0.02 3 3 S 77133 uncultured bacterium 0.01 1 0 P 57723 Acidobacteria 0.01 1 0 - 57727 environmental samples 0.01 1 1 S 171953 uncultured Acidobacteria bacterium 0.01 1 0 P 200918 Thermotogae 0.01 1 0 C 188708 Thermotogae 0.01 1 0 O 2419 Thermotogales 0.01 1 0 F 1643950 Fervidobacteriaceae 0.01 1 0 G 2420 Thermosipho 0.01 1 0 S 2421 Thermosipho africanus 0.01 1 1 - 484019 Thermosipho africanus TCF52B 0.01 2 0 D 2157 Archaea 0.01 2 0 P 28890 Euryarchaeota 0.01 1 0 C 183967 Thermoplasmata 0.01 1 0 O 2301 Thermoplasmatales 0.01 1 0 F 90142 Ferroplasmaceae 0.01 1 0 G 74968 Ferroplasma 0.01 1 0 S 97393 Ferroplasma acidarmanus 0.01 1 1 - 333146 Ferroplasma acidarmanus fer1 0.01 1 0 C 224756 Methanomicrobia 0.01 1 0 O 94695 Methanosarcinales 0.01 1 0 F 2206 Methanosarcinaceae 0.01 1 0 G 2207 Methanosarcina 0.01 1 0 S 418008 Methanosarcina horonobensis 0.01 1 1 - 1434110 Methanosarcina horonobensis HB-1 = JCM 15518 0.01 1 0 D 10239 Viruses 0.01 1 0 - 35268 Retro-transcribing viruses 0.01 1 0 F 186534 Caulimoviridae 0.01 1 0 G 10639 Caulimovirus 0.01 1 1 S 213888 Dahlia mosaic virus
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Created: 22nd Mar 2020 at 23:13
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https://orcid.org/0000-0001-7484-6031
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, INDIE - Biotechnological production of sustainable indole, _p_stRT, Public project, Playground, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture
Institutions: National Institute of Biology, NewHorizon
https://orcid.org/0000-0001-7484-6031
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National Institute of Biology, Department of Biotechnology and Systems Biology projects
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato, _p_RNAinVAL, tst, tst2, Playground
Web page: http://www.nib.si/eng/index.php/departments/department-of-biotechnology-and-systems-biology
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project: _p_stRT Short Name: stRT Title: Solanum tuberosum Reference Transcriptomes Description: Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato pISA projects path: ../pISA-Projects Local pISA-tree organisation: National Institute of Biology pISA project creation date: 2019-10-22 pISA project creator: Maja Zagorscak, Ziva Ramsak, Marko Petek Project funding code: This project was supported by the Slovenian Research Agency (grants P4-0165, J4-4165, J4-7636, ...
Programme: NIBSys
Public web page: http://www.nib.si/eng/index.php/systems-biology
Start date: 1st Dec 2017
End date: 1st Jan 2020
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Investigation: _I_STRT Short Name: STRT Title: Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato Description: Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato Phenodata: ./phenodata_20191022.txt pISA Investigation creation date: 2019-10-22 pISA Investigation creator: Maja Zagorscak, Ziva Ramsak, Marko Petek Principal investigator: Kristina Gruden License: MIT Sharing permission: Public Upload to FAIRDOMHub: Yes
RELATED ...
Submitter: Maja Zagorscak
Studies: SupplementaryInformation, _S_01_sequences, _S_02_denovo, _S_03_stCuSTr, _S_04_stPanTr
Assays: Supplementary Information, _A_01_GC_content-count, _A_01_evigene, _A_02.1_BUSCO, _A_02.2_assembly-contribution-count, _A_02.3_InterProScan, _A_02.4_STAR, _A_02.5_STARlong_matchAnnot, _A_02.6_TransRate, _A_02.7_VecScreen, _A_02.8_DIAMOND, _A_02_cdhit_3cvs-GFFmerged, _A_03.1_filtering, _A_03.2_components, _A_03_components_3cvs-GFFmerged, _A_04_BUSCO_3cvs-GFFmerged, _A_04_TransRate, _A_05_BUSCO, _A_05_MSA_3cvs-GFFmerged, _A_06_tr_rep-transrate, _A_07_Desiree-mapping, _A_08_centrifuge_3cvs-GFFmerged, _A_09_annotation-GFFmerged
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Short Name: 04_stPanTr Title: Solanum tuberosum Pan-Transcriptome Description: Solanum tuberosum Pan-Transcriptome Raw Data: pISA Study creation date: 2019-10-22 pISA Study creator: Maja Zagorscak Principal investigator: Kristina Gruden License: CC BY 4.0 Sharing permission: Public Upload to FAIRDOMHub: Yes
Submitter: Andrej Blejec
Investigation: _I_STRT
Assays: _A_01_GC_content-count, _A_02_cdhit_3cvs-GFFmerged, _A_03_components_3cvs-GFFmerged, _A_04_BUSCO_3cvs-GFFmerged, _A_05_MSA_3cvs-GFFmerged, _A_06_tr_rep-transrate, _A_07_Desiree-mapping, _A_08_centrifuge_3cvs-GFFmerged, _A_09_annotation-GFFmerged
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Short Name: 08_centrifuge_3cvs-GFFmerged Assay Class: DRY Assay Type: GFFmerged Title: Centrigufe pan-transcriptome sequence classification Description: Classify cv rep transcripts and pan-transcriptome singletons based on taxonomy pISA Assay creation date: 2020-03-11 pISA Assay creator: Maja Zagorscak Phenodata: None Featuredata: Data:
Submitter: Andrej Blejec
Biological problem addressed: Model Analysis Type
Investigation: _I_STRT
Study: _S_04_stPanTr
