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Version 1 (earliest) Created 11th Dec 2012 at 11:57 by Sebastian Curth
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Projects: COSMIC
Institutions: Beuth University of Applied Sciences Berlin
I am a biotechnologist with main focus on theoretical studies. Currently, I am working on the implementation of a parameter estimation algorithm on GPUs to reduce the computational burden of huge ODE systems. I am a PAL and I am looking forward to communication with other SYSMO members.
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
Systems Biology of Clostridium acetobutylicum - a possible answer to dwindling crude oil reserves
Programme: SysMO
Public web page: http://www.sysmo.net/index.php?index=54
Organisms: Clostridium acetobutylicum
Automated model building using Taverna workflows from KEGG-Database
Submitter: Sebastian Curth
Studies: Automated Model Building, Reactome Analysis, Transcriptome Analysis
Assays: Example for model derivation from KEGG, Graph Analysis, Integration of data into the model, KEGG Data Mining
Snapshots: No snapshots
Conversion from KEGG Reactome Information to SBTOOLBOX2 format.
Submitter: Sebastian Curth
Investigation: Modular Model Building
Assays: Example for model derivation from KEGG, Integration of data into the model
Snapshots: No snapshots
Submitter: Sebastian Curth
Biological problem addressed: Model Analysis Type
Investigation: Modular Model Building
Study: Automated Model Building
Organisms: Clostridium acetobutylicum : ATCC824 (wild-type / wild-type)
Models: No Models
SOPs: No SOPs
Data files: Conversion Script for Model Building from KEGG-..., Extracellular Compounds for Toy Model, Reactome Data of C. acetobutylicum for Toy Model, Toy Model Map
Snapshots: No snapshots