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Created: 11th Dec 2012 at 10:09
Last updated: 11th Dec 2012 at 10:18
I am a biotechnologist with main focus on theoretical studies. Currently, I am working on the implementation of a parameter estimation algorithm on GPUs to reduce the computational burden of huge ODE systems. I am a PAL and I am looking forward to communication with other SYSMO members.
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Web page: http://sysmo.net/
Automated model building using Taverna workflows from KEGG-Database
Using Taverna for mining and MATLAB for conversion into specific formats (cytoscape, SBTOOLBOX2)
Submitter: Sebastian Curth
Biological problem addressed: Model Analysis Type
Investigation: Modular Model Building
Study: Reactome Analysis
Models: No Models
SOPs: No SOPs
Data files: Network statistics of Reactome, Results of Reaction Mining, Taverna Workflow for Compound Annotation from KEGG, Taverna Workflow for Gene-Reaction-Substrate-Pr..., Visualisation of Reaction Networks in C. acetob...
Snapshots: No snapshots