Edwards et al. (2010); WT in different light conditions.
Edwards et al. (2010); WT in different light conditions.
| Property | Value |
|---|---|
| BioDare ID | 13227622661196 |
| Author | Edwards, K.D. |
| Institution | University of Edinburgh |
| License | CC_BY |
Description
Literature data from: 'Quantitative analysis of regulatory flexibility under changing environmental conditions.' by: Edwards, K.D..
Theory suggested that multiple loops contribute the flexibility for molecular rhythms to track multiple phases of the external cycle. Clear dawn- and dusk-tracking rhythms illustrate the flexibility of timing in Ipomoea nil. Molecular clock components in Arabidopsis thaliana showed complex, photoperiod-dependent regulation.
Purpose
To investigate the dusk-sensing of clock genes and compare the results to mathematical models of the circadian clock.
Comments
SEEK ID: https://fairdomhub.org/assays/2921
Experimental assay
Projects: BioDare1
Investigation: Kieron D Edwards
Study: Edwards et al. (2010)
Assay position:
Assay type: Experimental Assay Type
Technology type: Technology Type
Organisms: Arabidopsis thaliana
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Created: 18th Jun 2026 at 12:52
Last updated: 18th Jun 2026 at 12:54
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https://orcid.org/0000-0002-1352-7245Research Software Engineer in the Biological Research Data Management team (BioRDM) at the University of Edinburgh.
The Centre for Engineering Biology is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2023 as the successor to SynthSys, itself founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE). CSBE was newly founded in 2007. The Centre for Engineering Biology is a hub organisation that links across multiple, major funding awards, including an Engineering Biology Mission Hub, and EPSRC C-loop.
Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository, BioDare1
Web page: https://biology.ed.ac.uk/centre-engineering-biology
Experimental data that were previously hosted on the original version of BioDare (biodare.ed.ac.uk), which opened in 2009, please see https://doi.org/10.1007/978-1-4939-0700-7_2. BioDare was designed as a repository of rhythmic biological data, especially for 24-hour circadian rhythms, with specialised analytical routines for period, phase and amplitude estimation on each data timeseries. Most rhythms tested were measured using gene expression, either directly as RNA levels, or indirectly using ...
Programme: Centre for Engineering Biology (prev. SynthSys)
Public web page: https://biodare2.ed.ac.uk
Start date: 7th Jul 2006
End date: 21st Dec 2017
Collection of experiments created by Kieron D Edwards on the original BioDare and automatically transferred to FAIRDOM Hub.
Quantitative analysis of regulatory flexibility under changing environmental conditions
Edwards et al. (2010)
DOI: 10.1038/msb.2010.81
Submitter: Daniel Thedie
Investigation: Kieron D Edwards
Assays: Edwards et al. (2010); WT in different light conditions.
effectofphotoperiods-edwards2010 (from BioDare)
STANDARD_DATAFILE.1 (from BioDare)
STANDARD_RAWDATAFILE.1 (from BioDare)
edwards.1 (from BioDare)
List of samples used in the assay (extracted from original BioDare metadata and converted to csv)
Original BioDare metadata, converted to json format
Readme file
