The model is applied to spring wheat, with ample supply of nutrients and water, also without pests, diseases and weeds. Radiation and temperature, being the most important environmental factors, and crop characteristics determine growth and development. Crop growth and development are simulated based on underlying chemical, physiological and physical processes. Dry matter accumulation is calculated from daily crop CO2 assimilation based on leaf CO2 assimilation and taking into account the respiration costs and allocation of carbohydrates to different plant parts. J. Goudriaan & H.H. van Laar, 1994. Modelling Potential Crop Growth Processes. Textbook with Exercises. Kluwer Academic Publishers, Dordrecht, The Netherlands, 238 pp. <br><br><strong>Originally submitted to PLaSMo on 2010-12-14 13:03:28</strong>
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Projects: PlaSMo model repository
Institutions: University of Edinburgh
SynthSys is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE).
Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository
Web page: http://www.synthsys.ed.ac.uk
What is PlaSMo? PlaSMo stands for Plant Systems-biology Modelling Ensuring the achievements of yesterday's Mathematical Modellers will be available for the Systems Biologists of tomorrow.
Our aims
To identify plant mathematical models useful to the UK plant systems biology community, which are currently in a variety of legacy formats and in danger of being lost To represent these models in a declarative XML-based format, which is closer to the systems biology standard SBML To evaluate the behaviour ...
Programme: SynthSys
Public web page: Not specified
Organisms: Arabidopsis thaliana, Ostreococcus tauri
Collection of models submitted to PLaSMo by Jonathan Massheder and automatically transferred to FAIRDOM Hub.
Submitter: BioData SynthSys
Studies: LINTUL_V2 - PLM_42, SUCROS1 - PLM_24
Assays: LINTUL_V2 - PLM_42, version 1, SUCROS1 - PLM_24, version 1
Snapshots: No snapshots
The model is applied to spring wheat, with ample supply of nutrients and water, also without pests, diseases and weeds. Radiation and temperature, being the most important environmental factors, and crop characteristics determine growth and development. Crop growth and development are simulated based on underlying chemical, physiological and physical processes. Dry matter accumulation is calculated from daily crop CO2 assimilation based on leaf CO2 assimilation and taking into account the respiration ...
Submitter: BioData SynthSys
Biological problem addressed: Gene Regulatory Network
Investigation: Massheder, Jonathan
Study: SUCROS1 - PLM_24
Organisms: No organisms
Models: SUCROS1 - PLM_24, version 1, SUBMITTED
SOPs: No SOPs
Data files: Display configuation file, PLM_24_ 1, Paramter file Netherlands 1973, PLM_24_ 1, Read me file, PLM_24_ 1, SUCROS1 parameter files (zipped), PLM_24_ 1, Simile model file (load straight into Simile), ...
Snapshots: No snapshots
Data file for PLaSMo accesssion ID PLM_24, version 1
Creators: BioData SynthSys, Jonathan Massheder
Submitter: BioData SynthSys
Data file for PLaSMo accesssion ID PLM_24, version 1
Creators: BioData SynthSys, Jonathan Massheder
Submitter: BioData SynthSys
Data file for PLaSMo accesssion ID PLM_24, version 1
Creators: BioData SynthSys, Jonathan Massheder
Submitter: BioData SynthSys
Data file for PLaSMo accesssion ID PLM_24, version 1
Creators: BioData SynthSys, Jonathan Massheder
Submitter: BioData SynthSys
Data file for PLaSMo accesssion ID PLM_24, version 1
Creators: BioData SynthSys, Jonathan Massheder
Submitter: BioData SynthSys
Originally submitted model file for PLaSMo accession ID PLM_24, version 1
Creators: BioData SynthSys, Jonathan Massheder
Submitter: BioData SynthSys
Model type: Not specified
Model format: Simile XML v3
Environment: Not specified
Organism: Not specified
Investigations: Massheder, Jonathan
Studies: SUCROS1 - PLM_24
Assays: SUCROS1 - PLM_24, version 1