Here is a collection of examples of possibilities for API communication in R
SEEK ID: https://fairdomhub.org/studies/365
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Projects: pISA-tree
Study position:
Experimentalists: Andrej Blejec
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Created: 11th Jun 2018 at 22:23
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Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, INDIE - Biotechnological production of sustainable indole, _p_stRT, Public project, Playground, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture
Institutions: National Institute of Biology, NewHorizon
https://orcid.org/0000-0001-7484-6031National Institute of Biology, Department of Biotechnology and Systems Biology projects
Projects: HYp - Spatiotemporal analysis of hypersensitive response to Potato virus Y in potato, pISA-tree, MOA - Multiomics analysis of potato response to Potato virus Y (PVY) infection, SUSPHIRE - Sustainable Bioproduction of Pheromones for Insect Pest Control in Agriculture, INDIE - Biotechnological production of sustainable indole, _p_stRT, ADAPT - Accelerated Development of multiple-stress tolerAnt PoTato, _p_RNAinVAL, tst, tst2, Playground
Web page: http://www.nib.si/eng/index.php/departments/department-of-biotechnology-and-systems-biology
WARNING: THIS IS A TEST PROJECT CREATED FOR TESTING THE UPLOAD TO FAIRDOMHUB USING seekr AND SEEK API
pISA-tree: Standard project directory tree
A set of batch files is used to create standard directory tree for research projects. Batch files are provided to make standardized nested directories in accordance with the ISA Abstract Model levels (Investigation/Study/Assay).
https://github.com/NIB-SI/pISA-tree
Linked resources:
- R support for pISA-tree DOI ...
Programme: NIBSys
Public web page: http://ablejec.nib.si/doc
Organisms: Not specified
General sandbox
Submitter: Andrej Blejec
Biological problem addressed: Model Analysis Type
Investigation: 1 hidden item
Study: FAIRDOMhub API usage in R
Organisms: No organisms
Models: No Models
SOPs: No SOPs
Data files: Test API connection to FAIRDOMHub, Test API connection to FAIRDOMHub, dummy file
Snapshots: No snapshots
Empty assay
Submitter: Andrej Blejec
Biological problem addressed: Model Analysis Type
Investigation: 1 hidden item
Study: FAIRDOMhub API usage in R
Organisms: No organisms
Models: No Models
SOPs: No SOPs
Data files: No Data files
Snapshots: Snapshot 1
Creator: Andrej Blejec
Submitter: Andrej Blejec
How to connect to the FAIRDOM SEEK with the collection of their APIs.
Creators: None
Submitter: Andrej Blejec