This study involves all data gathered from the Kollevåg study - studying environmental pollution at a capped waste disposal site in Kollevåg, Askøy.
Cod were caged in Kollevåg (Stations 1, 2 and 3 - from inner to outer parts) and at a reference location (Ref station) for a period of six weeks, from 2nd September 2016, to 17-18th October 2016.
SEEK ID: https://fairdomhub.org/studies/361
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Projects: Systems toxicology of Atlantic cod
Study position:
Experimentalists: Karina Dale, Mette Bjørge Müller, Zhanna Tairova, Essa Khan, Kristin Hatlen, Merete Grung, Fekadu Yadetie, Roger Lille-Langøy, Jan Ludvig Lyche, Ketil Hylland, Odd André Karlsen, Anders Goksøyr
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Created: 11th Apr 2018 at 11:46
Last updated: 20th Feb 2019 at 06:42
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- Assays (8)
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- Publications (1)
Projects: Systems toxicology of Atlantic cod
Institutions: University of Bergen
Expertise: Molecular Biology
Projects: Systems toxicology of Atlantic cod
Institutions: University of Oslo
Expertise: Ecotoxicology
The goal of the dCod-project is to combine the competencies in environmental toxicology, biology, bioinformatics and mathematics across the traditional department boundaries, to create a deeper understanding of cods' adaptations and reactions to stressors in the environment. Building on the thoroughly studies and mapping of the cod genome at UiO and the long research traditions on cod at the Department of Biology at UiB, the dCod project will expand our knowledge with methods based on genomics; ...
Projects: Systems toxicology of Atlantic cod
Web page: http://dcod.no
Coastal zones and oceans constitute an essential fundament for Norway’s history as well as current economy, providing ecosystem services for fisheries, aquaculture, transport, tourism, and recreation. The petroleum activities in Norwegian waters have been crucial for Norway’s financial growth and in financing the Norwegian welfare state. As the pressure on the oceans continuously increases, both the petroleum industry and the seafood industries have acknowledged that awareness and actions are ...
Programme: dCod 1.0: decoding systems toxicology of cod
Public web page: http://www.uib.no/en/dcod
Organisms: Gadus morhua
Information about the fish from the Kollevåg study
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Enzyme activity of glutathione-s-transferase (Gst) and catalase (Cat) in Kollevåg samples
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Enzymatic Activity Measurements
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Enzyme activity Gst+Cat_Kollevåg, Kollevåg biometrics
Snapshots: No snapshots
Concentrations of steroid hormones E2 and T in female cod plasma from Kollevåg fish
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Kollevåg biometrics, Steroid hormones plasma Kollevåg
Snapshots: No snapshots
Chemical analyses in Kollevåg includes sediment contaminant concentrations, concentrations of various contaminants in cod liver and concentrations of PAH metabolites in cod bile.
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: Gadus morhua
SOPs: No SOPs
Data files: Kollevåg biometrics, Liver chemistry_Kollevåg, PAH metabolites in bile Kollevåg, Sediment chemistry
Snapshots: No snapshots
Western blot results for Kollevåg samples.
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Kollevåg biometrics, Protein expression Cyp3a+Mt Western Blot_Kollevåg
Snapshots: No snapshots
Analyses of gene expression: qPCR analyses in liver (relative expression) and ovaries (absolute expression).
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Kollevåg biometrics, qPCR liver_Kollevåg, qPCR ovaries_Kollevåg
Snapshots: No snapshots
TBARS assay measured oxidative stress as levels of malondialdehyde in samples. Performed in cod liver samples.
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Kollevåg biometrics, TBARS_Kollevåg
Snapshots: No snapshots
Biosense Vtg assay measuring concentrations of vitellogenin in cod blood plasma
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: Gadus morhua
SOPs: No SOPs
Data files: Kollevåg biometrics, Vitellogenin_plasma_Kollevåg
Snapshots: No snapshots
Concentrations of vitellogenin in blood plasma in cod caged in Kollevåg and at reference location.
Creators: None
Submitter: Karina Dale
Measurement of oxidative stress (TBARS) assay in liver of cod caged in Kollevåg and at reference location.
Creators: None
Submitter: Karina Dale
Gene expression data of genes involved in steroidogenic pathways, measured in cod ovaries.
Creators: None
Submitter: Karina Dale
Gene expression data of various genes from cod liver.
Creators: None
Submitter: Karina Dale
Relative protein expression of the proteins Cyp3a and Mt in cod from the Kollevåg study
Creators: None
Submitter: Karina Dale
Investigations: 1 hidden item
Studies: Caging study - Kollevåg
Measurements of PAH metabolites in bile in fish caged in Kollevåg.
Creator: Karina Dale
Submitter: Karina Dale
Concentrations of various contaminants in liver from cod caged in Kollevåg and at reference location.
Creators: None
Submitter: Karina Dale
Concentrations of E2 and T in cod plasma of female cod caged in Kollevåg measured by enzyme immunoassay.
Creators: None
Submitter: Karina Dale
Concentrations of metals, PAHs and PCBs in sediment samples from Kollevåg and reference site.
Creators: None
Submitter: Karina Dale
Measurement of Gst and Cat enzyme activity in liver of fish caged in Kollevåg.
Creator: Karina Dale
Submitter: Karina Dale
Biometry data of fish from Kollevåg caging study
Creator: Karina Dale
Submitter: Karina Dale
Investigations: 1 hidden item
Studies: Caging study - Kollevåg
Assays: Chemical analyses, Enzyme activity assays, Enzyme immunoassay, Fish Biometrics, Gene expression, TBARS: Oxidative stress, Vitellogenin in blood plasma, Western blot - protein expression
Abstract (Expand)
Authors: K. Dale, M. B. Muller, Z. Tairova, E. A. Khan, K. Hatlen, M. Grung, F. Yadetie, R. Lille-Langoy, N. Blaser, H. J. Skaug, J. L. Lyche, A. Arukwe, K. Hylland, O. A. Karlsen, A. Goksoyr
Date Published: 26th Feb 2019
Publication Type: Not specified
PubMed ID: 30803754
Citation: Mar Environ Res. 2019 Mar;145:39-51. doi: 10.1016/j.marenvres.2019.02.003. Epub 2019 Feb 11.