Biometry data of fish from Kollevåg caging study
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Created: 8th Nov 2018 at 10:02
Last updated: 27th Nov 2018 at 10:20
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Version 1 (earliest) Created 8th Nov 2018 at 10:02 by Karina Dale
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Projects: Systems toxicology of Atlantic cod
Institutions: University of Bergen
Expertise: Molecular Biology
The goal of the dCod-project is to combine the competencies in environmental toxicology, biology, bioinformatics and mathematics across the traditional department boundaries, to create a deeper understanding of cods' adaptations and reactions to stressors in the environment. Building on the thoroughly studies and mapping of the cod genome at UiO and the long research traditions on cod at the Department of Biology at UiB, the dCod project will expand our knowledge with methods based on genomics; ...
Projects: Systems toxicology of Atlantic cod
Web page: http://dcod.no
Coastal zones and oceans constitute an essential fundament for Norway’s history as well as current economy, providing ecosystem services for fisheries, aquaculture, transport, tourism, and recreation. The petroleum activities in Norwegian waters have been crucial for Norway’s financial growth and in financing the Norwegian welfare state. As the pressure on the oceans continuously increases, both the petroleum industry and the seafood industries have acknowledged that awareness and actions are ...
Programme: dCod 1.0: decoding systems toxicology of cod
Public web page: http://www.uib.no/en/dcod
Organisms: Gadus morhua
This study involves all data gathered from the Kollevåg study - studying environmental pollution at a capped waste disposal site in Kollevåg, Askøy.
Cod were caged in Kollevåg (Stations 1, 2 and 3 - from inner to outer parts) and at a reference location (Ref station) for a period of six weeks, from 2nd September 2016, to 17-18th October 2016.
Submitter: Karina Dale
Investigation: 1 hidden item
Assays: Chemical analyses, Enzyme activity assays, Enzyme immunoassay, Fish Biometrics, Gene expression, TBARS: Oxidative stress, Vitellogenin in blood plasma, Western blot - protein expression
Snapshots: Snapshot 1
Information about the fish from the Kollevåg study
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Enzyme activity of glutathione-s-transferase (Gst) and catalase (Cat) in Kollevåg samples
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Enzymatic Activity Measurements
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Enzyme activity Gst+Cat_Kollevåg, Kollevåg biometrics
Snapshots: No snapshots
Concentrations of steroid hormones E2 and T in female cod plasma from Kollevåg fish
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Kollevåg biometrics, Steroid hormones plasma Kollevåg
Snapshots: No snapshots
Chemical analyses in Kollevåg includes sediment contaminant concentrations, concentrations of various contaminants in cod liver and concentrations of PAH metabolites in cod bile.
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: Gadus morhua
SOPs: No SOPs
Data files: Kollevåg biometrics, Liver chemistry_Kollevåg, PAH metabolites in bile Kollevåg, Sediment chemistry
Snapshots: No snapshots
Western blot results for Kollevåg samples.
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Kollevåg biometrics, Protein expression Cyp3a+Mt Western Blot_Kollevåg
Snapshots: No snapshots
Analyses of gene expression: qPCR analyses in liver (relative expression) and ovaries (absolute expression).
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Kollevåg biometrics, qPCR liver_Kollevåg, qPCR ovaries_Kollevåg
Snapshots: No snapshots
TBARS assay measured oxidative stress as levels of malondialdehyde in samples. Performed in cod liver samples.
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: No organisms
SOPs: No SOPs
Data files: Kollevåg biometrics, TBARS_Kollevåg
Snapshots: No snapshots
Biosense Vtg assay measuring concentrations of vitellogenin in cod blood plasma
Submitter: Karina Dale
Assay type: Experimental Assay Type
Technology type: Technology Type
Investigation: 1 hidden item
Study: Caging study - Kollevåg
Organisms: Gadus morhua
SOPs: No SOPs
Data files: Kollevåg biometrics, Vitellogenin_plasma_Kollevåg
Snapshots: No snapshots