Assays

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4 Assays visible to you, out of a total of 4

RNA sequencing: Casaminoacids vs D-glc

SulfoSys - Biotec

No description specified

Submitter: Jacqueline Wolf

Assay type: RNA-seq Profiling

Technology type: Rna-seq

Investigation: Amino acid degradation in Sulfolobus solfataric...

Study: Comparison of Sulfolobus solfataricus P2 grown ...

Organisms: Sulfolobus solfataricus

SOPs: SulfoSYS_BIOTECH: RNA isolation and sequencing

Data files: RNA-Seq mappings - Sulfolobus solfataricus P2 -..., RNA-Seq mappings - Sulfolobus solfataricus P2 -..., RNA-Seq raw data - Sulfolobus solfataricus P2 -..., SSO Genome reference

Snapshots: No snapshots

Created: 7th Aug 2016 at 16:19, Last updated: 18th Oct 2018 at 09:38

Proteome analysis: Casaminoacids versus D-Glc

SulfoSys - Biotec

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No description specified

Submitter: Jacqueline Wolf

Assay type: Proteomics

Technology type: Tandem Mass Spectrometry

Investigation: Amino acid degradation in Sulfolobus solfataric...

Study: Comparison of Sulfolobus solfataricus P2 grown ...

Organisms: Sulfolobus solfataricus

SOPs: SULFOSYSbiotech_Proteome analysis

Data files: Integrated summary of transcriptomics and prote..., Proteomics_Casaminoacids vs Glucose_Phenyx sear..., Proteomics_Casaminoacids vs Glucose_results, Raw MS data Casaminoacids vs Glucose - Suppleme..., Raw MS data Casaminoacids vs Glucose - Suppleme..., Raw MS data Casaminoacids vs glucose - Main Zi..., Raw MS data Casaminoacids vs glucose - Suppleme...

Snapshots: No snapshots

Created: 7th Aug 2016 at 16:28, Last updated: 18th Oct 2018 at 09:38

Metabolome analysis: Casaminoacids versus D-Glc

SulfoSys - Biotec

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Intracellular and extracellular metabolome analysis

Submitter: Jacqueline Wolf

Assay type: Metabolite Profiling

Technology type: Gas Chromatography Mass Spectrometry

Investigation: Amino acid degradation in Sulfolobus solfataric...

Study: Comparison of Sulfolobus solfataricus P2 grown ...

Organisms: Sulfolobus solfataricus

SOPs: No SOPs

Data files: Amino acid depletion profile of S. solfataricus..., Calculation of amino acid uptake rates, Integrated summary of transcriptomics and prote..., Metabolomics Casaminoacids vs Glc

Snapshots: No snapshots

Created: 7th Aug 2016 at 16:31, Last updated: 18th Oct 2018 at 09:38

Metabolic modelling of S. solfataricus during growth on casaminoacids

SulfoSys - Biotec

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Growth on D-glucose served as reference scenario

Submitter: Jacqueline Wolf

Biological problem addressed: Genome Scale

Investigation: Amino acid degradation in Sulfolobus solfataric...

Study: Comparison of Sulfolobus solfataricus P2 grown ...

Organisms: Sulfolobus solfataricus

Models: Metabolic model of Sulfolobus solfataricus

SOPs: No SOPs

Data files: Biomass composition of S. solfataricus P2 grown..., Calculation of amino acid uptake rates, Description of changes made to the model compar..., Distribution of enzymes involved in oxidative S...

Snapshots: No snapshots

Created: 7th Aug 2016 at 17:19, Last updated: 18th Oct 2018 at 09:38

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