Samantha Nolan
SEEK ID: https://fairdomhub.org/people/417
Location:
Germany
ORCID: Not specified
Joined: 20th Dec 2012
Expertise: Not specified
Tools: Not specified
Their tagsRelated items
SysMO is a European transnational funding and research initiative on "Systems Biology of Microorganisms".
The goal pursued by SysMO was to record and describe the dynamic molecular processes going on in unicellular microorganisms in a comprehensive way and to present these processes in the form of computerized mathematical models.
Systems biology will raise biomedical and biotechnological research to a new quality level and contribute markedly to progress in understanding. Pooling European research ...
Projects: BaCell-SysMO, COSMIC, SUMO, KOSMOBAC, SysMO-LAB, PSYSMO, SCaRAB, MOSES, TRANSLUCENT, STREAM, SulfoSys, SysMO DB, SysMO Funders, SilicoTryp, Noisy-Strep
Web page: http://sysmo.net/
"Systems Understanding of Microbial Oxygen responses" (SUMO) investigates how Escherichia coli senses oxygen, or the associated changes in oxidation/reduction balance, via the Fnr and ArcA proteins, how these systems interact with other regulatory systems, and how the redox response of an E. coli population is generated from the responses of single cells. There are five sub-projects to determine system properties and behaviour and three sub-projects to employ different and complementary modelling ...
Programme: SysMO
Public web page: http://www.sysmo.net/index.php?index=55
ROR ID: Not specified
Department: Not specified
Country: Germany
City: Stuttgart
Web page: http://www.uni-stuttgart.de
This ordinary-differential equation model is a spatially lumped model showing the behaviour of oxygen in the three compartments medium, membrane and cytoplasm and its impact on FNR inactivation, hereby showing the effects of different oxygen concentrations, diffusion coefficients and reaction rates. The model was created with the Matlab SimBiology toolbox.
Creator: Samantha Nolan
Submitter: David Knies
Model type: Ordinary differential equations (ODE)
Model format: SBML
Environment: Not specified
This partial-differential equations model focuses on the oxygen gradients in consideration of the three-dimensional cell and environment.
Creator: Samantha Nolan
Submitter: David Knies
Model type: Partial differential equations (PDE)
Model format: Mathematica
Environment: Not specified
