SEEK ID: https://fairdomhub.org/people/1344
Location: United States
ORCID: https://orcid.org/0000-0003-3879-4080
Joined: 1st May 2019
Expertise: Not specified
Tools: Not specified
Related items
SynthSys is the University of Edinburgh's research organisation in interdisciplinary, Synthetic and Systems Biology, founded in 2012 as the successor to the Centre for Systems Biology at Edinburgh (CSBE).
Projects: Millar group, PHYTOCAL: Phytochrome Control of Resource Allocation and Growth in Arabidopsis and in Brassicaceae crops, TiMet, POP - the Parameter Optimisation Problem, Regulation of flowering time in natural conditions, PlaSMo model repository
Web page: http://www.synthsys.ed.ac.uk
Research programme in the Takato Imaizumi lab, with multiple collaborators. Published in Song et al. Nature Plants 2018; Kinmonth-Schultz et al., in silico Plant 2019.
Programme: SynthSys
Public web page: https://faculty.washington.edu/takato/
Organisms: Arabidopsis thaliana
Assays for model composition here, in order to share model files; potentially training and validation data in other Studies.
Submitter: Andrew Millar
Investigation: Temperature effects on Arabidopsis floral induc...
Snapshots: No snapshots
Model files for FMv1.5. The model is based on FMv1 of Chew et al. PNAS 2014, which is also in FAIRDOMHub and linked to the Model record as an 'Attribution'. FMv1 was extended in this work by Hannah Kinmonth-Schultz and Daniel Seaton, in Matlab.
Submitter: Andrew Millar
Biological problem addressed: Model Analysis Type
Investigation: Temperature effects on Arabidopsis floral induc...
Organisms: Arabidopsis thaliana : Col-0 wild type (wild-type / wild-type)
Models: framework model v1_5
SOPs: No SOPs
Data files: Data_training & testing
Snapshots: No snapshots
Abstract (Expand)
Authors: Hannah A Kinmonth-Schultz, Melissa J S MacEwen, Daniel D Seaton, Andrew J Millar, Takato Imaizumi, Soo-Hyung Kim
Date Published: 2019
Publication Type: Journal
DOI: 10.1093/insilicoplants/diz006
Citation: in silico Plants 1(1),diz006
Abstract
Authors: Hannah A Kinmonth-Schultz, Melissa J MacEwen, Daniel D Seaton, Andrew J Millar, Takato Imaizumi, Soo-Hyung Kim
Date Published: No date defined
Publication Type: Not specified
DOI: 10.1101/267104
Citation: Mechanistic model of temperature influence on flowering through whole-plant accumulation of FT